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Sequence
The following sequences are available for this feature:
mRNA from alignment at Sc0000086:164282..169161- Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >Blg00319.5 ID=Blg00319.5|Name=Blg00319.5|organism=Branchiostoma lanceolatum|type=mRNA|length=4880bp|location=Sequence derived from alignment at Sc0000086:164282..169161- (Branchiostoma lanceolatum) TACCCTAATGTCTTTAATGACTTAATTTTTTGTTGGTTACAGTGTGCAAG
AGATCTGTGGCTCAAGGATCAGCTTCACATGAGGTAATGATTCCAGTTTC
CCTAATTGAAATATCTATCTCAGTGATTCTCACTGTACCTCATGACATTT
TGTATGGTCAATATGATGGGAGAATTACCAAAATGTTAATTCAAACCTTT
CTATCCTTCTACCTTAACAACTTATTAAAGTAAAATTTGCAGAACTTTAA
GGAAAAATGTGCAGAATTAGTCAATGTGTGAAAAAACAAAGCAGTAATTT
CTAACATTTAGTTCCATATATATACATGTAGGCATAAATGCTGGAAAACT
TAGTGCTTACAGTGTACATGTAATTCTAAGGCTACTTTATTAAAGCCATA
AACTGGTTGGTGACAAAAGCAGGCTAAAGGATAGGATGGCTCTAGGTAAA
TTTACCTTTATATATATATGATTATTGATTTAAAAGATTTCCAAGTTAAA
GAATGTAGTAACAAATAGGCTACAAGTTCTGCAGCTATGGTATTGAAAAA
ATTCAATATTGTGACTAAATGTAAGCTGACTCTATGTATACATGTAGATG
TGTTCACATAGAAGTATCCCTTAACTTGCAGATGGCCATCATTTTCAATG
CTGAAGGGTTGAAGGACCTTCTCAGTCCACCATGTGTGGCTCAGAACTTT
GTCAACCACAATGCAGTCCTTCACAAGGTAAGTTTTCTCCAAGTTTTATA
ATAGATAAGTGCACAAATTTCATACATACACTGAAGGGAGCCCTTAGATG
CCTGAGCCACTGAAAAATTAACCCATTCGGTTGAGACACTATTTATTTTT
ATACAATTATAATTATTTTATCATTTTTTATAAAGTGTGATATCACATGG
ACAAATAGATAAATGTGATTGGTAGAATGTTCATGTACAATGATAGAGGT
CGCACACTCAGGCATTTGTTTACTGTGCATGATTAAGATGTTTGTTCCCA
TACACAGGTGTTTGTGGTGGGCGAGTCTTATTTTGTTGTGGAGAGGCCAT
CTCTCAAGAACTTCTCAGCAGGCGGTGAGTTCCTATATGTACCCTGAGAC
ATTTGGGACTACTTGTACAGACATGTTGACATTGTGATACATCTATTATA
GATTGTTGTGTATTTGCATTGTCTTATAAAAATGTGACTGTTGTAAACTG
TGAAGGTGTGTATGGTGATGTAGCATATCAATGTGTATAAATGTACTCTA
GATGCCTTGTTATTGTAAACGAAACAACAAAGATTATAAATAGCTTGCAG
GTAATGTTATACATACCACGCACAGTATACCTTTTTTTATTGTTATAGTA
TTGTTTTTTGTCATGTTCTGACTGTTTAAAATTGTGTTTTAGATCAAAGC
ACAATCTACTTCAACAGCCATGATGTTTCCAAGGCTGGGTCTTCTTCATT
CCTCAATCAGGTATAGAGTACATTTGTACATGCTTCCTCAAGACTCAAGT
TGAAGTTTTTTTCCATGCATTGTTAGGCCCCCTGCAACAGAGACTAATAT
AGAATGGCATGAAAGATTTGCCATAGTATCTTACAATGTATTACAAATAA
CTTACATAGTACAAATTGTCGGACATGCTATTCATTGGAAACTACTTAAT
CCTGTAATAGTCGTGATTCTTGATGTTATAGGATGATGTACAATGGAGAT
GAATTACCATCTACGATATATATTTTGCGGAGAAAAAATTCACAATGGTA
CTGCCAACATGTGTCTATGTGATACTGTGTCAACACCTGTTCATTCATAA
TCCACAGTTGGACAGTAGGGACAAAGTGTCATGCCCGTCCCTCCCTCTCT
GCCGAGAAAAGTTCGAGCACGTGTTGACCAAGTTACGGCAGCAGCTGGGC
ATCACGCTGTTCGGCGTGGACATTATCGTGGAGAACAGGACCAGTCGGCA
CGCTATCATCGACATCAACGCATTCCCAAGTCAGTCCACCTTTACTTTTT
GTCCTCAGTATCATTAGTAATTGATCCCTGGTCATTAAGACTGAGTGATA
CTTTATGATATGATATTCAATATTCAACTACCATTGAACTAGTGTTTGGT
CCTAGATACCAAAGAACGATTTAAGTGTCTATGTGTTGTCTATTCTTTGT
TGTTACTATTGCAATTTTTGTCCAATTACATATTGCTCTATGCAGATAAG
TAGTTCTACAGTATTCTATGTGTTTAAAACTTAGAAAAGGTACATATACC
GAAATTGATGTAAGATGTTGACTAAACAAAGTGTTTGTTTTTCCTGTAGG
TTATGACGGGGTACCAGACCCTTTCTCTGTAGTGGCGGACCACCTGCAAT
CGCTTTTGTCTCAGCACTGTGGCGTGTCAAGGGCCACGGTCAATGCCAAC
ACATGCCACTGCCAACCGAACAGAGCAGAAGTGTCTGTACCAGATTCAGT
AGGACCAAACAAAGACAGTACGACAGTAAGGACAGAGAGTGCCAACAGCA
GTCTTATCATGCTGACCAATGGGACGGACTATAACAATGGGTCAGGTTTT
GACTCTTCAAAAATTACCAATGGGGAAACATTGGCTCCTCCGAGGATTGA
TGGAGTAGGGTTGACTGAAATTGTAAGTAGGAAGGATGTACCCTATACCA
AATTTGGCAAGGGACAGGAGGTGTACTTAGGAGGACTGGCCAATGGGAAT
GGCCCTGCATGCGTGACAACAAGTGCCGATGAGGCCCAGTGTTGTAAACA
GTTGACCAATGGGGAGAAACTGGGGTTTGTACGATTAGCCAAAGTTTAGG
ATGTAAAAGATGCATAGCAGATTGTGCGAGACTGAAATCTATTTGTTTTG
TGATCACAGCCACTTAATTGCATGTGGAAGAATGTCCTACTTTTGATTAC
AGACCTTTGAAGCTCTATTTACTTTTATCCAAACATGTTACAATCTCATC
ATTTCCTTGCTGACCAATCAGAAAGCAGCACTAAGCCCATCAGAAATCAG
TAGTGATTAGCCAATCAAGTGTCCTATTACAATTGTACCTGGCCAATCAG
GTGGCAGAACATACATGTATACATCTCAGTTGACCAATGACAATGAGCAT
GACAATATCAATTTTAAGCATTGAAGTTACAAACCAAATAGTAAGCATAA
AGATGATGCTTATTTTTTGGTTATATTAAACATAGTCTAAATGTAGTAAT
GTTTGAACCATCTATTCACTTTGTCATAAATTATTATAAATGTCATAGGA
TAATGTAACTGATGATTTTTTTGGTAAGATAATTGTATGAAATAGGGTAA
AGTGACCAACTGATAGCTAATGAACAGTACCCACTGCCCCAAGTTATTTG
GAAATTAACTTTTCAAAGATACTGTAAGCTAGCCAACTACAACTTGGCAT
CTAATATACATATAGGCTGTCCTTGGTTTTAATTCCAAATGTGCCCCATG
GAAAGTTGTACATGTTGTTGGCCTGGGACAGTGACATCAGAATACTATAT
TGTTTGTAAACTTGTGATATTTCGCATAATAGTACTAGTGTTTGTAAACA
AGCAATAGCTTAGCTGAAAGTAATTTTGAAGCTAGCTGGCTAGTAGTTAC
TGTAGATATATCCATGTTGTAATTCAGTTTCAAATTGTTAGTCTTTGTAC
ACAAGTAACAATTACATTGGACAAACAAAGACCAGTTTTGGTTATCTTCA
ATTTTCTTTTTTTTTCATGCATCACAAGGTTTTTTTGTACCAGTATAAGA
TTTATAATGTTTGAAAATGGGTTATATTAGCTTTGATATATGTTTATTTG
TTGTTACATAAATGTACAACAGAAACCATAGCAAAATCCTGGAATCGTCT
GAAAAGTATCGGAATTTCACTTTTTAGGTAAAATATTTGTATCACAGACT
ACAAATAATGTTTCATGATGAAATATTGCATATGATAGTCTACAGGCACA
TCCCTGTTGACCACCATTGCCTGGTGTATGTATGTTCTCAACTTGCTCAA
CAATCTCAATGTTTTAAACATAAAGAAACAAATATTTTGGACTATAGTCA
GTGTATTTGTAGAAGAAGATTGTGAACTAACGTTGTTAACAAAGTACCAA
TTTGTGCCAACTTGCTGCTAAACAGGCTTTCAGCTGGCAAGTCCAGAAAA
GACAACCACAAAAATGCTCACTTTCGTTATTATTTGGCATAACTGATCAA
AACGTGAAGATGCTTGATTTGCCAGTTCAGTAATTGTCATCAATCCAGCA
GCAATGTTATTGATGTTCTGTAATACTTCAGAAAATGGAACAAAGAGTAT
TGAAATATTAACATGTGTAGCCTATGAATTGTGAAGTACATGTTTGTGTT
TTCTTGTTAGGTTATAGGTTAGACATTTTTCATTTGATAGAAGAATATCA
ATATTGAATTTGGAATGGTGGAGGGACACAGGCTTTNGACACAGGCTTTC
TGGGCCCCCCCCCCCCCATATTATTGAACGGTATTGCCATGTGTCTTGAA
TGGGTTGTTTACATGTACTTCTTTTGACCCCCCCCAAAAGAGAAATTTCT
CAAGAAAATATTTTATCAAAACTTCTACATTTTTCTTATCTATGGAATGA
AAGCTGATGTTAAATGAAATGGATATGATTGAAAATTAATTTGAAAATAC
CAAATGTTACTTGAACATTCCTATCTCATGAGGGTAGGTCCAAAAAGTAT
TGTACAGTTATGTCATTTTACTAATGGGTTTGTGTAATGTTAACAGGTAA
GACATTTAACGTTATATTGTGTTGTGCTTGTGTGTTGAAGTACCTGTATG
ACAGATTAGTACAAAATGAAAAATCAAAATTGTTATACTAATTTCACATC
AAATAAGAAATACAACATCAATAACATCAA Coding sequence (CDS) from alignment at Sc0000086:164282..169161- >Blg00319.5 ID=Blg00319.5|Name=Blg00319.5|organism=Branchiostoma lanceolatum|type=CDS|length=903bp|location=Sequence derived from alignment at Sc0000086:164282..169161- (Branchiostoma lanceolatum) ATGGCCATCATTTTCAATGCTGAAGGGTTGAAGGACCTTCTCAGTCCACC ATGTGTGGCTCAGAACTTTGTCAACCACAATGCAGTCCTTCACAAGGTGT TTGTGGTGGGCGAGTCTTATTTTGTTGTGGAGAGGCCATCTCTCAAGAAC TTCTCAGCAGGCGATCAAAGCACAATCTACTTCAACAGCCATGATGTTTC CAAGGCTGGGTCTTCTTCATTCCTCAATCAGTTGGACAGTAGGGACAAAG TGTCATGCCCGTCCCTCCCTCTCTGCCGAGAAAAGTTCGAGCACGTGTTG ACCAAGTTACGGCAGCAGCTGGGCATCACGCTGTTCGGCGTGGACATTAT CGTGGAGAACAGGACCAGTCGGCACGCTATCATCGACATCAACGCATTCC CAAGTTATGACGGGGTACCAGACCCTTTCTCTGTAGTGGCGGACCACCTG CAATCGCTTTTGTCTCAGCACTGTGGCGTGTCAAGGGCCACGGTCAATGC CAACACATGCCACTGCCAACCGAACAGAGCAGAAGTGTCTGTACCAGATT CAGTAGGACCAAACAAAGACAGTACGACAGTAAGGACAGAGAGTGCCAAC AGCAGTCTTATCATGCTGACCAATGGGACGGACTATAACAATGGGTCAGG TTTTGACTCTTCAAAAATTACCAATGGGGAAACATTGGCTCCTCCGAGGA TTGATGGAGTAGGGTTGACTGAAATTGTAAGTAGGAAGGATGTACCCTAT ACCAAATTTGGCAAGGGACAGGAGGTGTACTTAGGAGGACTGGCCAATGG GAATGGCCCTGCATGCGTGACAACAAGTGCCGATGAGGCCCAGTGTTGTA AACAGTTGACCAATGGGGAGAAACTGGGGTTTGTACGATTAGCCAAAGTT TAG
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
Feature Name | Unique Name | Species | Type |
Blg00319.5-exon-Sc0000086-1570713199:169079..169161 | Blg00319.5-exon-Sc0000086-1570713199:169079..169161 | Branchiostoma lanceolatum | exon |
Blg00319.5-exon-Sc0000086-1570713199:168435..168530 | Blg00319.5-exon-Sc0000086-1570713199:168435..168530 | Branchiostoma lanceolatum | exon |
Blg00319.5-exon-Sc0000086-1570713199:168088..168154 | Blg00319.5-exon-Sc0000086-1570713199:168088..168154 | Branchiostoma lanceolatum | exon |
Blg00319.5-exon-Sc0000086-1570713199:167702..167769 | Blg00319.5-exon-Sc0000086-1570713199:167702..167769 | Branchiostoma lanceolatum | exon |
Blg00319.5-exon-Sc0000086-1570713199:167183..167354 | Blg00319.5-exon-Sc0000086-1570713199:167183..167354 | Branchiostoma lanceolatum | exon |
Blg00319.5-exon-Sc0000086-1570713199:164282..166862 | Blg00319.5-exon-Sc0000086-1570713199:164282..166862 | Branchiostoma lanceolatum | exon |
Position
The following features are aligned
Aligned Feature | Feature Type | Alignment Location |
Sc0000086 | genome | Sc0000086:164282..169161 - |
Properties
Property Name | Value |
GeneID | Blg00319 |
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