|
|
Sequence
The following sequences are available for this feature:
mRNA from alignment at Sc0000086:714714..718174+ Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below. >Blg00316.0 ID=Blg00316.0|Name=Blg00316.0|organism=Branchiostoma lanceolatum|type=mRNA|length=3461bp|location=Sequence derived from alignment at Sc0000086:714714..718174+ (Branchiostoma lanceolatum)
ATGCTCCACAACTCTCTTGACGACTTCAAACCCGTTGGGGAAGCAGCAAC
TGTCCATGACGTGGCACAACTATTTGCTCGTCGTGGGAACGAGTTTTCTG
TTTACAGCATAGACTGGGAACAAGAAGTGGTGGTGCTCATTCGACCCGTG
GATGGTGTGGATCTGAAAGGACATCCGTTCTTTCGTGAGGTTTGTATTCA
CTTTGTTCATTCAGAATTACCTCTGACAAAATGTAGAATGACCTTATGTT
TTCAGCTTGGTTGATTTGCAAGTGATGTGGGGTTGGCGTTATAGTTAGGG
TGTTTGGCCCAAAGGTCCTGAGTTCGAATTCCCTGATATGCCACCGATCT
TGTGCCCTTTGGAAATGCTCTTAACACGACTTTCCCCACTCCACCCAGGT
GCAAAAATGGGGACACCTCACTTCCTCTGAAATAGACAAACTTTTGGGAC
GTAACGGATATGTCTGGACCAGATCAAGATAAAGGTTGAAGGATGGCGAG
ATAGGGAGAGAGAGGGGAAATACGTTAACGTTTCTCTAGACTACTTTCCA
ATAATCTCAGAAAAATGGAAGTGCGCATACTTTCATTTTTCTTAGATTAT
TGGAAAGTAGTCTAGAGAAACGTTAACGTTTTTCATAGGCAATACGTTCT
GGTACTATTCCACACTGCAGCTAGGTGTCGCTGCTTACAATGCGTTCCGA
AACGTTAATTATTGTCATATGTTCGATCCCAAACGTAGAGTAGTGTCATA
TATACAAGAATAAGCATTGTCATATATACAAGAATAGATACTCTGTCATA
TATACAAAAATAATTACTCTCCAGTGACAAACATCATTCCTGTATAATGC
CAACATGTCACTTTTGGGGCCGCATTGCAATCAGCGACACACATAACTAC
AGAGCGGAATAGAACCAGTGAGTATTGCCCCGAGGAAGGTTGCAGGCGGT
CCGAGAGACGTCGACTGTTGACTGTACATAGCTAAAGAACCGTGTTATCC
AATGGTATTCCAACATGATGAAATAATTCACGAATGATTCTTTTAGGCTC
AGAGACGAAAAGCGGCCGAGGTTCTCTGTATTCCTCTCGAGCGACTTCTG
GACGTGGCGAGTGCCGTAGCTGACGAGGTTGCGCATGTGCAAGAAATCTT
CATCTTCATGACAGGTAAGGGGAGAAACATATTAACTAGAACATGCAAGG
GAGGGAAACTCCTATAATTTGCAGTAAAGTTGCGACATACGATGATTGCC
CCCACTGACCGTATGTTCCGCTATGAGAAAGTCATTTTCTAAATGTTGGG
CGGCAATCTCTAACACCTCATACCGACCTGCTGTATATATACATGCCATT
TACATGCAATGTTTTCAATTTTGTACTGTCTATTTTGACGTCGATATTAC
ATTACACATGCAAGTCTACTTTTCAAAGTTATGACTTTTCAAATTCAAAG
CAGCAACACTAACGATGACAATGATGAAAGGGAAGCAACACGATTAATGT
TTTGTTTCTGGTTACGTTATACAGGGCGATGTGGGTCGACTCTGGTAACG
CAATTTGTAGAGGCCACTTCGGTGGCACAGGCTGTGAGTGAGCCTGATGT
GTTTTCCGTCATATCCATGGCTCTCTACCGATTCAAGCGGTCCTCTCAAC
ATGGCCAAACTCCATCTCGTCACGACTGTTCTACGGTCCTGTCAAATGAA
GAATCTACCATAGCCCTTTTGAGAAACGTTGTCACCTTGATGAACTACAG
CCTCGTGACGTCAGATCCACGTCATCGTGATGTCATTTTCTACAAGTTCA
GGCACGACGTCATCCTCCTGGGTGACCTGATGGCTCGAGCCTTCCCGTCC
GCCAAGACCGTCTTCATGTACAGGAATGGTATGGAAGTTTCTGATTCATT
CAAACGAGCTTTCTTCCAGCAGAGCTACGTGCTTTACCGGGCTTATCGAC
TAGCAGTAAGCCTTGGTTTGGGGATGCTGCTGTCCCCGCCACCTGACTTT
CGCTGTTTTGGAGACGACCCGAAGTTCTGTACGGTGCGTGCTTACGGCTC
GGGCCCCTTCTACCTAGCCGCGTGTTGGGTCGGTGTGATGCAGTGCGCCG
CCGATCTGCAGAAGAAGCAACCTGGGCATTTCTTCCACGCAGTCATCTAT
TACTCAGCCCTCGTCAACGACAAAGAGAAGACATTCCGTCTACTGATGAA
GAAGCTCGGTTTGAGGTGGAGTCCAGAAGACCCGGAAGAAGACAAAGATA
AGATCGAGAAAGCATTGGTTACGGACAGCCAAGCAGGAACCATAGCGTCA
TTAAAGTAAGGCCGCACAATCTTTTAATGCCAGTCCACACGCACTATTTT
TTCAATGTTCATATACACTTTCCAAAAGCCCTATTTATCATCTCCGTGAT
ATTCTTACGGGGCGTATTGTTTTTGTTGTGCTTTCTGTTTGTCAGCTTGT
TTGTTTGTGTTTTTGCATTCATTGGCCAGGAAGGTATTACATATTGTATA
CTTGGCATGTGGTTTTTGAAAGACAAACGTCAAGGTCAATTCGGACCTTC
TAGCGGCTTTTTTGGTACTGTAGTGAAACTTTCTGTTTTCGTACCTGCTG
TGCTGGACATGTATTAATTTCATGGTGGCAGAAAGCTTCTTGGCTTGGAA
AGAAATGGTGTAGTTTTTTTTTTTCCCACTAGCAGCTTGGTCTGAAAATG
TAGGGGTGGTTTTGTCGGAAACATGTGAGGATAACTCAAGAACGGATGAA
TGGATTTTCTAGATTTTGGACATGTTGCACAAAGGTGCACATGTTGTTAT
TGTGTGTGTGTGTGTGTCTGTCACCACGACAACTCAAGAACAACATAGAT
TAATAATATGCTTATAAGTCTTATGTATATGTTATTTACATGATCAAGGA
CATACAATGGAATAAGATATTTACAAATGCCGAGGCTGTTGACAAGGTGT
TTTTGTGAAAAAGAGCTTTTGGTTACTATTGGTAACTATTGACAGGATGT
TCCTGTCAATAAGAATATTTTTGTACTATTGAGAGAATGTCCATGGTCCT
GTCAGCCCTAACCCTATCTTCTTACATAACCCTAACCCTGAGTATGACCT
TGCAAGAGTGTGCAAAAGAGAGACTAACTGGCTTTCCTCAGAAAGACTAC
TGAACTATTTTTTAAAGGCTATTTCATTGTTAAATGGATATTTGAAGAAA
AAATCCATACCGAGATGATAATTCGGGTCTTCTAATTTTTTTTTCAATAG
CCATGGTGATTTACAAATGAAAGCTCACTGAGGTATGACATCTTTGAACT
CTTGCTATTACAGGGGGAGGAGGCCTGGTGAGAAATGGGCACCGGACGTT
TCATCGCGCTGGATTGGGCAGTGGGAACGAGAGATCTTCGAGGATGTCTG
TCGCTATGGTGGGAACGAGATCACCGGTCCTGGCTTTCTCCTACCAGACA
CCATCGTGTAA Coding sequence (CDS) from alignment at Sc0000086:714714..718174+ >Blg00316.0 ID=Blg00316.0|Name=Blg00316.0|organism=Branchiostoma lanceolatum|type=CDS|length=1236bp|location=Sequence derived from alignment at Sc0000086:714714..718174+ (Branchiostoma lanceolatum)
ATGCTCCACAACTCTCTTGACGACTTCAAACCCGTTGGGGAAGCAGCAAC
TGTCCATGACGTGGCACAACTATTTGCTCGTCGTGGGAACGAGTTTTCTG
TTTACAGCATAGACTGGGAACAAGAAGTGGTGGTGCTCATTCGACCCGTG
GATGGTGTGGATCTGAAAGGACATCCGTTCTTTCGTGAGGCTCAGAGACG
AAAAGCGGCCGAGGTTCTCTGTATTCCTCTCGAGCGACTTCTGGACGTGG
CGAGTGCCGTAGCTGACGAGGTTGCGCATGTGCAAGAAATCTTCATCTTC
ATGACAGGGCGATGTGGGTCGACTCTGGTAACGCAATTTGTAGAGGCCAC
TTCGGTGGCACAGGCTGTGAGTGAGCCTGATGTGTTTTCCGTCATATCCA
TGGCTCTCTACCGATTCAAGCGGTCCTCTCAACATGGCCAAACTCCATCT
CGTCACGACTGTTCTACGGTCCTGTCAAATGAAGAATCTACCATAGCCCT
TTTGAGAAACGTTGTCACCTTGATGAACTACAGCCTCGTGACGTCAGATC
CACGTCATCGTGATGTCATTTTCTACAAGTTCAGGCACGACGTCATCCTC
CTGGGTGACCTGATGGCTCGAGCCTTCCCGTCCGCCAAGACCGTCTTCAT
GTACAGGAATGGTATGGAAGTTTCTGATTCATTCAAACGAGCTTTCTTCC
AGCAGAGCTACGTGCTTTACCGGGCTTATCGACTAGCAGTAAGCCTTGGT
TTGGGGATGCTGCTGTCCCCGCCACCTGACTTTCGCTGTTTTGGAGACGA
CCCGAAGTTCTGTACGGTGCGTGCTTACGGCTCGGGCCCCTTCTACCTAG
CCGCGTGTTGGGTCGGTGTGATGCAGTGCGCCGCCGATCTGCAGAAGAAG
CAACCTGGGCATTTCTTCCACGCAGTCATCTATTACTCAGCCCTCGTCAA
CGACAAAGAGAAGACATTCCGTCTACTGATGAAGAAGCTCGGTTTGAGGT
GGAGTCCAGAAGACCCGGAAGAAGACAAAGATAAGATCGAGAAAGCATTG
GTTACGGACAGCCAAGCAGGAACCATAGCGTCATTAAAGGGGAGGAGGCC
TGGTGAGAAATGGGCACCGGACGTTTCATCGCGCTGGATTGGGCAGTGGG
AACGAGAGATCTTCGAGGATGTCTGTCGCTATGGTGGGAACGAGATCACC
GGTCCTGGCTTTCTCCTACCAGACACCATCGTGTAA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| Blg00316.0-exon-Sc0000086-1570713199:714714..714902 | Blg00316.0-exon-Sc0000086-1570713199:714714..714902 | Branchiostoma lanceolatum | exon |
| Blg00316.0-exon-Sc0000086-1570713199:715760..715877 | Blg00316.0-exon-Sc0000086-1570713199:715760..715877 | Branchiostoma lanceolatum | exon |
| Blg00316.0-exon-Sc0000086-1570713199:716238..717018 | Blg00316.0-exon-Sc0000086-1570713199:716238..717018 | Branchiostoma lanceolatum | exon |
| Blg00316.0-exon-Sc0000086-1570713199:718027..718174 | Blg00316.0-exon-Sc0000086-1570713199:718027..718174 | Branchiostoma lanceolatum | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| Sc0000086 | genome | Sc0000086:714714..718174 + |
Properties
| Property Name | Value |
|---|
| GeneID | Blg00316 |
|
