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Sequence
The following sequences are available for this feature:
mRNA from alignment at Sc0000086:1188968..1192777+ Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below. >Blg00315.0 ID=Blg00315.0|Name=Blg00315.0|organism=Branchiostoma lanceolatum|type=mRNA|length=3810bp|location=Sequence derived from alignment at Sc0000086:1188968..1192777+ (Branchiostoma lanceolatum) ATGATGCTAGCTTTAGTCAGGAGCGTGCTTGGCTCCAAGTCTGCCCTTAT
GGTCAATTCAGTTGATTTGAATATTTTAAGTAGATTAGTTCTCCAAGGTT
TTCTCAGGTCCATACCTGACACAACTGTGGGGATGTTAAGTCTAACTGAC
ATTGAGTATGTATGTGTTGAGGGATGCCCCATTAATGATTCACGTCTGGT
GGATGGGGTTTTGTTTGAGACCCCCAAAATCACAAAACAATACTTAGCTA
AGGTTATACCTAGAAAGGTACATCTCCAAGGTGGCGCAGAAACCATAAAA
GTTGCCCTGTTCAACACATCTCTGTCGGGGGATAGCGAGGAGTTCGTGGA
CACAGCGTACGAGGCAGATGTCGGCGTGTCTGGGGATGACTCGGTGTTCC
GACACCTGATGCAGGTGGCAGCACACCTGGTGCAGCTGCAGGTGGGAGTG
TTGGCATGTCAGAGGGTGGTCCATCCAGGTGTGCAGAAGTACCTGGCTGA
GAATGGAGTCCTGACTGTGGACAGACTGGGAAGTCTGCATGTTGTAGCAG
TACAGAGGCTCACAGGTAAGTGTAGGAGTACATAGTTTTATCCCATGCTG
TGTAGTCTTTTGTAGATTAGTTTCCAAGAAATGTTGCATAGTATGAGTTG
CCATACGTGTATGTTGGATCTTATAAAGTTGTTGAGCAATGAATCAATAT
GTATCACACAAGGTGTAGATTTTGTTGTGCTATAAGCTGTGATGCTTGAA
AAAAAAACGTGGGAAATGGTGAAAGAACAATTGTTGATTTGTTGATCACC
ACAAGGTCACAGAGTTCCAAAATCACCAGAAAATGAAGAAAATTTTTTAC
CTGAAAGTTCACCCTGTGACATTTGTTTTGGTTCAGTGACCTGTGAACAT
CAGCCGATCCCTAAAAATTGTGCAGGGATTGAGAGGACACTGTCCATATT
CCAGCCAAAAATGTCCTATAGTATAGAGCTCGCAGACTCTGCTGGTGAGC
TATTTTCTACTGTGTGACTGGTTTTAATCCCTATGCTCACCTTGTAATGA
TAACGCTTGTAAACTGAAGCTGAAGTTAAGGATATCTTGACTTTCGTCAG
TAAAGTGTTCTTGACTGTTCCCTTAGATGCAACAGCCATTGGCACATTAC
ATGCCACCATCAAAGAAGACTATATTGGCCACCTGCAAAGTGTGAGCACA
GTCCAGATACAACATAAGAACTACCTACACCTCCAGTCTTCCACCAGTCC
TGTGACCACCCTGGTGCTGTGTAACAGGAATGAAGCAGCCCTACTAGAAA
TGAAAGTGAGCACTGGAAATCTTGAAATGATCTCAGTGGTATTATGTTTG
CAGTTGTTGCAGTGATCCCACCACTGTGAAATCATGATAGTGTGAAAGAT
TTTTCTTCAACAATGCAGTCCACTACTAATTTAGATAATTCAAATTTCCC
CCCCTTCTGCAAAATTTAGTCCCCTCAAACTTTTGGATGATTTAATGTAC
TGAATCCATATGTTTGAAAAAATGCATGACAGCAAAGGAGAATTGTCCAT
CTGAAAAATACTTTAAAAGGAAATGTTCACCATGGTAATTATATATATAC
AAATGTATGTGTGTGTATATGTGCTTGCATGTGTGTGTGTATGTGTGTAT
GTGTATAGAAATACCAAAGTATCTAAATTTTGATTGAATTCAGTTCCAAC
TAGCGCAAATCTAAGCAAAGATTCCTGTCATCAATCTAGACACACTCCTG
CTACCCCATTCCATGACACATGCTGATACCTTTTTCTCTGTTGTACCAGG
ATGTTTGTCGTACAGCCCACCATGTCCTGTGCCAGGCCTTGAGAACTCCA
CATGTCCTGTGTGGAGGGGGCTGTACAGAAACACACCTGGCAGCACACCT
CACAGCACAGGTCAGCTACTTTTACACCTGTAATCATTGTCAGGAAGGTT
TTCATTGTTGTTCTGCTATCCCTTTTGGATTGGTAAAGGAATTAATTGAT
GATGTTTGGACTCTTAAACCCTAACTCCTCTTAGTAATTTTACTTAAGGT
AATTAATCCCTTCCTGGTAGGTCTGGTACATGTCAGCAAGACGGAATCTG
AAAACACAATTTAATCCTCCAGCCTAATGGTGTGCTTTCATCGTGTACAT
GCATGTCTGCAATCAGCCACCTGTGCTTGTGGAATGCAATTGGGAACCAT
AATAGACTGCATAGTCTGTGCATGCCTTTTTCCGTGAGGCGTAGCAAACT
ATGATTCAACATGGCTGGCCCACTCTAGTTCAACGTGAAGTTAGTTCATG
CAAGAAGGTCTAAACCTTCTTGGTTTATGTATGGAATTTCTCATGCAGGT
TTAGAACGCAGACTAATTTGAGACTACATGTGACGTGTACATAGATTGTT
ACATGACTGTGATTGTTGTGGTTCATTGGCAAGGGGCCAATACTCAGGGG
GTTTGCCAATACTGAGTGACTGGAAAGAAGGCATACCTAAGCCTGTTATA
TGTCCCAAAGAATTCGGCCAGAGCAAACCTAGGCAGAGCCCTGAGTGTGA
AATGCTCAAAGAATATTTTCTCTAACATGGGACAATCTGATCCCTAAACT
GTAGTCCCTGCCAGCAGTGTGTAAGATGGAATCCCCCTCCCCCCAGCCTT
TGCGATTTTGCCAAAGAACATAGCTTATATAACACACAGCAGTGGATTGT
CAATCTAGTCATTTGGATCTAAACCCCAGACTAGACATGTAGGCACTGCA
CATTCAACATAGTAAGGTATATGCATATATGCAATTGGCCTTCATGATAA
CTTTTTTATTGATTGTACATGTATTGACAAGCTATTCAACAGTTTATTGA
ATATGTATCGCCCAATACAGAGGAGGAAATGTGGTTCAGCTAAATTCTAT
ACTTAAGAATCCTATTTCAGAAAATTTGAACTTTGTCAATGGACACATTG
CTGAGACTTAAGAGCATACAGTACTCCTTGTACATTACTTTCCAGCTGTT
AGTGATGACTGATTCCTAGACAAGATGTCAAACACATGCATTAGGCAATG
TACAATCATACACATTGTTCTCTGTGCATTCTAGGTCAGGATGCAAGAGG
AGACGCTGCTTGCAAAGCTCCGCTGCTCCAAAGCCCAACTGCACACTGCT
GCAAACAACTTTGCACGCTGTCTGGAACAAGTGGCCATGGCACTGGAGCA
TGATGGGGGATGTCATGGGTCAGACCCTGTCAATCATCACCACTGGCTCC
TCCCACCCTGGGCCTCCACCATGGACCCTGCTGAGGCAGGTGTGGAGACA
TGTGCATGTGGGGTGGTAAAAACAGACAAGATTGAGTTAGCTAGCTGCTC
TCCCATTGGTCACCTCAGCAACCAATCCCAGCCATCCTCCAGTTCAGAAG
GTCATGGAAAACATAATGATGACAAAAGCAATTGCAGTGTGAGCTTGACA
GATTACATGGACCAGGCAACACAGAAAGGTGTTGAGTCTAGTTTTTCTAA
TGTTGTGTTAGACTCATTTCCTGTGAAGTTGAATGCCTTTGTGGTAGCTG
TTGAGACAGCTAACATGATACTGACTGTCAACAGGACTATTTTTGACAAA
AATTGAATTCTTAGAAAAAGGTAAAATCAGGAAGTGAGAACTGAAAATTG
GAAGAATTAATGAGAATATTGCAGAAGCATTTAGTTTAAATTATTTCATG
ATAGGTATATCTAGATATCTCTGATGAAATGCATCGTAGACTTTGCACAT
TAATAAATTTTTGTGATTTAGCTTGTGGATATGTCTTGTTTTTGATAGTT
AAGACTGTAG Coding sequence (CDS) from alignment at Sc0000086:1188968..1192777+ >Blg00315.0 ID=Blg00315.0|Name=Blg00315.0|organism=Branchiostoma lanceolatum|type=CDS|length=882bp|location=Sequence derived from alignment at Sc0000086:1188968..1192777+ (Branchiostoma lanceolatum) ATGATGCTAGCTTTAGTCAGGAGCGTGCTTGGCTCCAAGTCTGCCCTTAT GGTACATCTCCAAGGTGGCGCAGAAACCATAAAAGTTGCCCTGTTCAACA CATCTCTGTCGGGGGATAGCGAGGAGTTCGTGGACACAGCGTACGAGGCA GATGTCGGCGTGTCTGGGGATGACTCGGTGTTCCGACACCTGATGCAGGT GGCAGCACACCTGGTGCAGCTGCAGGTGGGAGTGTTGGCATGTCAGAGGG TGGTCCATCCAGGTGTGCAGAAGTACCTGGCTGAGAATGGAGTCCTGACT GTGGACAGACTGGGAAGTCTGCATGTTGTAGCAGTACAGAGGCTCACAGA TGCAACAGCCATTGGCACATTACATGCCACCATCAAAGAAGACTATATTG GCCACCTGCAAAGTGTGAGCACAGTCCAGATACAACATAAGAACTACCTA CACCTCCAGTCTTCCACCAGTCCTGTGACCACCCTGGTGCTGTGTAACAG GAATGAAGCAGCCCTACTAGAAATGAAAGATGTTTGTCGTACAGCCCACC ATGTCCTGTGCCAGGCCTTGAGAACTCCACATGTCCTGTGTGGAGGGGGC TGTACAGAAACACACCTGGCAGCACACCTCACAGCACAGGTCAGGATGCA AGAGGAGACGCTGCTTGCAAAGCTCCGCTGCTCCAAAGCCCAACTGCACA CTGCTGCAAACAACTTTGCACGCTGTCTGGAACAAGTGGCCATGGCACTG GAGCATGATGGGGGATGTCATGGGTCAGACCCTGTCAATCATCACCACTG GCTCCTCCCACCCTGGGCCTCCACCATGGACCCTGCTGAGGCAGGTGTGG AGACATGTGCATGTGGGGTGTTAAGACTGTAG
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
Feature Name | Unique Name | Species | Type |
Blg00315.0-exon-Sc0000086-1570713199:1188968..1189018 | Blg00315.0-exon-Sc0000086-1570713199:1188968..1189018 | Branchiostoma lanceolatum | exon |
Blg00315.0-exon-Sc0000086-1570713199:1189235..1189532 | Blg00315.0-exon-Sc0000086-1570713199:1189235..1189532 | Branchiostoma lanceolatum | exon |
Blg00315.0-exon-Sc0000086-1570713199:1190094..1190272 | Blg00315.0-exon-Sc0000086-1570713199:1190094..1190272 | Branchiostoma lanceolatum | exon |
Blg00315.0-exon-Sc0000086-1570713199:1190767..1190877 | Blg00315.0-exon-Sc0000086-1570713199:1190767..1190877 | Branchiostoma lanceolatum | exon |
Blg00315.0-exon-Sc0000086-1570713199:1192052..1192282 | Blg00315.0-exon-Sc0000086-1570713199:1192052..1192282 | Branchiostoma lanceolatum | exon |
Blg00315.0-exon-Sc0000086-1570713199:1192766..1192777 | Blg00315.0-exon-Sc0000086-1570713199:1192766..1192777 | Branchiostoma lanceolatum | exon |
Position
The following features are aligned
Aligned Feature | Feature Type | Alignment Location |
Sc0000086 | genome | Sc0000086:1188968..1192777 + |
Properties
Property Name | Value |
GeneID | Blg00315 |
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