Blg00314.5 (mRNA) - B. lanceolatum

Overview
NameBlg00314.5
Unique NameBlg00314.5
TypemRNA
OrganismBranchiostoma lanceolatum (Amphioxus)



Sequence
The following sequences are available for this feature:

mRNA from alignment at Sc0000086:228095..231267+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>Blg00314.5 ID=Blg00314.5|Name=Blg00314.5|organism=Branchiostoma lanceolatum|type=mRNA|length=3173bp|location=Sequence derived from alignment at Sc0000086:228095..231267+ (Branchiostoma lanceolatum)
AAAAAACTTAGTACCACGAAACGTCAATGTACATCAATGACTATCCCTCT TTCTCTGCGTTGCTGTGTAGATTTTCAAATCCTGAAGGGTGTTATAGCAA TAGTGCTTGAAACCCTTCAAGTTCCAGGCGGTATTTTACCAAAAGCGGAA CTTCCGCGTTCTGCTCCAAACAATGGCAGGCTGCAGTACTGTTTACCTCC GCCAGGCTTCTCTTCATGCGTGCTGGGCTTTATACCTTACACTTTTTGTC ATATTGCAGTCTGTGTCCGTTAAATTCTGCACATATAGTTCACGAAAATA AGATTTTTACATAGCTGACACGCTGCATACAATACACACATCATGCCTGA CGAACTTTTCACACTGTTCCCGTTTTGCAATCCAAACCGTGAATGTGTGA AAGAAAACAAGGGACGACGGTATTTGCCCACACAGACATTCACATAGACG TTGATGACATTGTATCAAAATGAAGAGCAATATTAATGAGTAAATGATTG GAATAGACCTTCTTTTTTAATCTGTTTGACTTGCATAATTTGGTTAATAA TATTTCCCACTCATACTGTACCCACGTGTTTGCTTTTTGGCCAGCAGACT ATCGATAGCCTTGAAACAGCCATGGCAGCAGCACATCTCCTGGCCGTAAT CCTCCTGATCGCCACCGCCGCACAAGCCGTCCTGGTGCCTGAAGCGTGGC TAGATGCTGATTCCTTCCTCTCAATCTTCGCCTTCAAAGGACCTGTGCGC TGGTCTAACTGTGGTAAGTTTCAGGTGTTTTATCAACCGAATGTGGCATC AATTTTTCCTTTGAACCTTCTACCACCCTGTCTTGTCACTTCGTTGGATT TATCTATCTATCTATTTAGTTAGTTAGTTAGTTAGATGTGTTGCTGTTTT GTTATTGCTTTAGTGGAAGACATAACCTGTTGTGCACCCCCACCTCCCCA CTTACAGGTGATCCCGTCACACAGAGTTTTAACGGGACGATCACCCCAAA CCCACCAATGAGAGGACAGAAAGTCGCAGGCTCTTTCACCTTTGTACCAG GTATGTGCTGACGGGTCGATAAGAATAGATGTGAATCAATCAATCAATCA ATCAATCAATCAATCAATCAATTTCTTATATATATATATATATATATATA TATATATAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGATATAGATATA TATATATATGTATATATATATATATATATATATAGAGAGAGAGAGAGAGA GAGAGAGAGAGAGAGAGATATTGATATGTATAATTATGTATATATATATA TATAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGATGTATAGA TAGATATACCGCATTATTGGTGATCCTCTTACAAGTGTTAAGTATGAGTG TATGTAACTCTACAATTGTTGTTTCGGTACTTATAACTACAGACGCAGAT CTAACCGCTGGAAAGATCAGCCTGGATCTGTGGTATAACGGATCCCCTGC GCTAAAGGTACCTCTCCCGATCTGCAAAGGCGGCAAGGGATCGGAATACT GCCCGATGAAAAAGGGAGGTGAGTAACGGTCACAGGGAATATGCTTGGTC TGGGGTGGGATACAATGGACGTTGTATATATACTGCTTTATACTTAGCAT AAGTTGTCTTTTTGTTATAATTTGGCCTATGTTATGTTACATGGGGGGAA GCACAATTATGTTTCCTTGCCACTCTAGCCCCCTTTTTGTCCTCAGTTTG CGTCACGTTGCCTAAATGCATGCTTTACTGCTTGATTATAGAAAAATTTA ACAAACTTTGATACACTTTGAAGTTGACTACTCCCTTCTACTATTTAGTA ACGTGTGATTGATTCATCTTAGCATATATTGTACGTCTGTTTGCCCTACA GTGAAGGTGACCGCTGCCAGTTCTACCGCAGTGCCCAAATACTTGCAGCC GGTAAGATGAAATTCTCCAGTGTGGTACAGACTTATAAATGAAAGGTTTC TGTATTGTAATTATTTATTCTTTATTTATTGAAACGCCCACTCCACTTTA TAAGATTAAAACACCTATAACGGCAGTATGATAAAGATCTAGTTCCCGGT TTCTACGGTAAAACACTTTCAGAAATTCCTCAAAATCGAAGTACTAGTAC CACAATGATGCTCATGTTGGAACACATTAAAATTTGGTTCCCAAAAACAG TTCCTAAAACTGCAGTGTGACAGACACTGAAATGACTATGTACATTAATG TCCGTTACCGACAGATACCCTCTTCCCCTTTTTCGTTACTAAAAAGGAAG GAAATCCTTTCTGTTCCGTAAAGTCTTGCTGACTTTTGTTCTTTTTAGTG TTGTTCAATCTTTACTTTCAATTCTCTATACTTTTTAATCTCGTCATCAT CATATACATTGCTACGATGACAATTTAGTCCATCACACATATCTAATGCG CATATTTTGTAATGCTGTAACTGACTATGAAGTGCGCATATAGATTGGTA CGATGACTATTTAGTCCACCACACATATAGATAATGCGTGTGTGCTGTTA TGAAGTGTGCATATAGATTGCTATGATGACAATCTAGTCTACCGCACGTA CTACTGGCAATGAAGCTACGCTGTTAACTTTTGATGAGGTGTGATTTCTT GTTTTATTAGCCATAAAATTGTGCGCTATTTGGAAACCTGGCGTCTGATA CGACTTTTTGTTTCTTCATTTTGGCGCATGCGCCCTTGCAGGGACACTAC AACGGCACCGCCATCTTGCTGAATCAGGACAACCATCAGATGCTGTGCAT TCAGGCGGAGGGGGACCTGGCCTAGATCTGAGGAGCGAAACCAAATGTTT CAGAAACATTGCCTATTCAAGAGCGCTAGAATCAACAATCCCCATTATCA TCACATTCTTGACTTGAATTAAAAGTGTTCGAATAAAGATTTGACCAAAG ATCAACAGGATTTGTGTTTTATACGATCTGCTCACATGCACAATATCGAC AACGTATGTTGTATTTTGGAAAACTATGCCATTTACAGCAAAGGATATCA TGAATATCATGAAACACGTGTTATTTCTGTTGGATATGGTTTGTTAAAAT TGAGTAGATATTCAAGCTTTCATATAGGATTACTCTGAAAGAGTAGACGC TAAAAATAAAATGTCGCATGAAA

Coding sequence (CDS) from alignment at Sc0000086:228095..231267+

>Blg00314.5 ID=Blg00314.5|Name=Blg00314.5|organism=Branchiostoma lanceolatum|type=CDS|length=369bp|location=Sequence derived from alignment at Sc0000086:228095..231267+ (Branchiostoma lanceolatum)
ATGGCAGCAGCACATCTCCTGGCCGTAATCCTCCTGATCGCCACCGCCGC
ACAAGCCGTCCTGGTGCCTGAAGCGTGGCTAGATGCTGATTCCTTCCTCT
CAATCTTCGCCTTCAAAGGACCTGTGCGCTGGTCTAACTGTGGTGATCCC
GTCACACAGAGTTTTAACGGGACGATCACCCCAAACCCACCAATGAGAGG
ACAGAAAGTCGCAGGCTCTTTCACCTTTGTACCAGACGCAGATCTAACCG
CTGGAAAGATCAGCCTGGATCTGTGGTATAACGGATCCCCTGCGCTAAAG
GTACCTCTCCCGATCTGCAAAGGCGGCAAGGGATCGGAATACTGCCCGAT
GAAAAAGGGAGGTGAGTAA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Feature NameUnique NameSpeciesType
Blg00314.5Blg00314.5-proteinBranchiostoma lanceolatumpolypeptide
The following exon feature(s) are a part of this mRNA:
Feature NameUnique NameSpeciesType
Blg00314.5-exon-Sc0000086-1570713199:228095..228857Blg00314.5-exon-Sc0000086-1570713199:228095..228857Branchiostoma lanceolatumexon
Blg00314.5-exon-Sc0000086-1570713199:229052..229144Blg00314.5-exon-Sc0000086-1570713199:229052..229144Branchiostoma lanceolatumexon
Blg00314.5-exon-Sc0000086-1570713199:229537..231267Blg00314.5-exon-Sc0000086-1570713199:229537..231267Branchiostoma lanceolatumexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Sc0000086genomeSc0000086:228095..231267 +
Properties
Property NameValue
GeneIDBlg00314