Blg00312.0 (mRNA) - B. lanceolatum

Overview
NameBlg00312.0
Unique NameBlg00312.0
TypemRNA
OrganismBranchiostoma lanceolatum (Amphioxus)



Sequence
The following sequences are available for this feature:

mRNA from alignment at Sc0000086:160196..162756-

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>Blg00312.0 ID=Blg00312.0|Name=Blg00312.0|organism=Branchiostoma lanceolatum|type=mRNA|length=2561bp|location=Sequence derived from alignment at Sc0000086:160196..162756- (Branchiostoma lanceolatum)
GAACGTACGAACGTGGTTCTAAACCGTCATCTGTTCTATTCTGAGTGGTT ATCCGTGGCAACCCTGTGTTTGTGTTCATTCCACGAGTGACTCTTGTCGT GGAAGGACGTTCGTCCGAACAGCTCTCCCTATCTCTGTGTTCTACTGTTC TACATTCTGAATTTTTGAGTCGGACGCTTATTCAAACATGTCACTGCCCA TGGAACCATCAGTAGCAGCCGCCTCTGAACCATCTCCGGCCGGTAAGACT GTCTCAGATAGACACCGGCGCGAGGCCCTTCTGAAGCTTCAGAACCGGGC AAGGCGGCTGCCTGCTATGGAGAGACCAACGGAAGCCGTCTGCAGTTCTT CACACAACAGGAAGGAGGAGCCACTGAGCACCAAAGGTAAGTATGGCGCC AGCAGCAGTGATGAGTCCGACACCAGCAGCGACGAGGAGGATGACACCAG CGCGGAGGAGTCCAGCAACGACGACCCGGAGGAGTCCAGCCGCCCGGAGG AGTCCAGCAACGACGACCCGGAGGAGTCCAGCCGCGTCAACCCGGAGGAG CCCAGCAACGACGACCCGGAGGAGTCCAGCCGCCCGGATGAGTCCAGCAA CGACGACCCGGAGGAGTCCAGCAACGACGACCCGGAGGAGATCAACAGCG ACGAGGATGCAGCCTGTGACGAGAAGGAGGACAGCCGTGATGAGAAGGAG ACTAGCTGTGCTGACGTGGACCTGTCGAGTCTCTCTTCAGGTGGATCAGA ATACGGTAAAGGTAAGGACAACAATTTCTACTCATTTCCAAGTTCACCCC CAACAGATTGAATTACGTTTAGTACCACGGTTATACATATGGTGCAACTA ATAACACCCTTCAGACGACCCGGTCAGCTATTTTCCACACCCTGTCCGCA AAGTAGTACTAGTACACGATGCTGATTTACCGATTTGCTTTTGCTGGAAG GTGATGAATAGAAAGTAATTATGGTGAGAAAACATCATGAATCAGTCCAA TCATAGATTTGAATTCGTTTTGAGCACACCCGTTATAAACAAAACAAACG TACCGTGTTGACTGGTGATTTTCCACAATACAATGTGTCATGGGGAAAAT GGCTACATATGATGCAAATGGACTCCAGCAGCTAATGGTTGGGTGACATT TTTTTCTGACAATAAAAAGTGTGATAAAAATGCAAATCATATCTACTGAT TCAAAATCAATATCACACAACCCTCAGTGCAGGTCCGAGGTCTTATTCAA AGTATTTATAGATTGTATATTGTGTGATGATGCAGCTTGCTTACTAGCTT AAGGCAAGTCAGTGCTGGCGATGACGTCACTTCCGCCAGAAGATGCAGTC TGTACATTGATTGAAAACCAATATTACTGTACGACTTGTAGGGAAGAAGA GGGGCTCCAGGAGAAAGGTGAAGTGGTGGAGGAAGGTTAAGAGGCTCTTC TGCTGCTGCGTCAGGCCAGACGTCACGGATGAGGAACTGGTCAGTAACAC TGGTTTTTATTTCTTTACCCATTTGATATACCGACATATTGTTTTAATTT GGGCATGTCTTTTAAGAAGAATCAGGACGTGTTTTCACACACACACACAC ACACACACACACACACACACACACACACACACACACACACACACACACAC ACACACACACACACACACACACACACTCANCACACACACACACATACACA CACACACACACACACACACACACACATACACACACACACACACACACACA CACACACACACTCACACAAACACACGCACACATACATACACACACAGAGA CAGACATACACAGACATGCACACATACACCCACATATACACACACACACA TACATACATACATTCACAAATGCATCAACACACATGGATCAGAATTGTCA TTATTCTAAAAGTAAAACTTTGCTGTGACAAAAATAAATCTGTAAACACT TACTATTAGTGCTTTAATCATTTCTTCTTTTCTTTCAGAAAAGACGCTCC AGCTTGGAAGACTTCTACTTTGAAGACTTCTATTTTGATGATGAACTATA TTAGAAACTTTTATATTGTATGATTTTCAGACAAGAGAGAGAAGGAAAAG ACTAGTAAAGTCTTGTATTTTTATAAAGATTGTGAAGAAACTGCTTTATT GTATCATATGACAAGCGAAAGATCACTATTTATGATTGAGTGTACATGTT TATAATGTATAAAAGAAATTTGTATCATGAAAATAAAGCTTGATCAAATG ATATTGAACAGAACATTGTCATGTGCTTTCTGTTTGTTTCCTTCCACTAT GTAGACTACGTAAGGAATATGTAATATAATGTAGAACTTCATTTTTTTTT ACATCGACCACTTCAGAAACGGTTACCATTATGCAGCAACGTTAATGCTA CCAAATTCTCATACTTGCTTCTAATTTTCTGTGTCTGTAAATTCTTCATG ATTGGTTGAACGCTATAGCCTTTTACCTCCAATGGACCATCGCAACACAC AAATAAACATGAAAAATAACTATAAATCAGAACAAACAGAACTGAGATAT GAGAGTTACTG

Coding sequence (CDS) from alignment at Sc0000086:160196..162756-

>Blg00312.0 ID=Blg00312.0|Name=Blg00312.0|organism=Branchiostoma lanceolatum|type=CDS|length=738bp|location=Sequence derived from alignment at Sc0000086:160196..162756- (Branchiostoma lanceolatum)
ATGTCACTGCCCATGGAACCATCAGTAGCAGCCGCCTCTGAACCATCTCC
GGCCGGTAAGACTGTCTCAGATAGACACCGGCGCGAGGCCCTTCTGAAGC
TTCAGAACCGGGCAAGGCGGCTGCCTGCTATGGAGAGACCAACGGAAGCC
GTCTGCAGTTCTTCACACAACAGGAAGGAGGAGCCACTGAGCACCAAAGG
TAAGTATGGCGCCAGCAGCAGTGATGAGTCCGACACCAGCAGCGACGAGG
AGGATGACACCAGCGCGGAGGAGTCCAGCAACGACGACCCGGAGGAGTCC
AGCCGCCCGGAGGAGTCCAGCAACGACGACCCGGAGGAGTCCAGCCGCGT
CAACCCGGAGGAGCCCAGCAACGACGACCCGGAGGAGTCCAGCCGCCCGG
ATGAGTCCAGCAACGACGACCCGGAGGAGTCCAGCAACGACGACCCGGAG
GAGATCAACAGCGACGAGGATGCAGCCTGTGACGAGAAGGAGGACAGCCG
TGATGAGAAGGAGACTAGCTGTGCTGACGTGGACCTGTCGAGTCTCTCTT
CAGGTGGATCAGAATACGGTAAAGGGAAGAAGAGGGGCTCCAGGAGAAAG
GTGAAGTGGTGGAGGAAGGTTAAGAGGCTCTTCTGCTGCTGCGTCAGGCC
AGACGTCACGGATGAGGAACTGAAAAGACGCTCCAGCTTGGAAGACTTCT
ACTTTGAAGACTTCTATTTTGATGATGAACTATATTAG
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Feature NameUnique NameSpeciesType
Blg00312.0Blg00312.0-proteinBranchiostoma lanceolatumpolypeptide
The following exon feature(s) are a part of this mRNA:
Feature NameUnique NameSpeciesType
Blg00312.0-exon-Sc0000086-1570713199:161996..162756Blg00312.0-exon-Sc0000086-1570713199:161996..162756Branchiostoma lanceolatumexon
Blg00312.0-exon-Sc0000086-1570713199:161268..161365Blg00312.0-exon-Sc0000086-1570713199:161268..161365Branchiostoma lanceolatumexon
Blg00312.0-exon-Sc0000086-1570713199:160196..160768Blg00312.0-exon-Sc0000086-1570713199:160196..160768Branchiostoma lanceolatumexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Sc0000086genomeSc0000086:160196..162756 -
Properties
Property NameValue
GeneIDBlg00312