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Sequence
The following sequences are available for this feature:
mRNA from alignment at Sc0000086:548813..555770- Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >Blg00309.5 ID=Blg00309.5|Name=Blg00309.5|organism=Branchiostoma lanceolatum|type=mRNA|length=6958bp|location=Sequence derived from alignment at Sc0000086:548813..555770- (Branchiostoma lanceolatum)
GTAAAAGGTTTCGGGGTGGGGAGATTTTTAGGGGGAGTACTAATAGCTAC
ATTTTGACCCGAAGAGAACTTTAAGCTATATTTTCATATACAAATATACC
ACCGATAAGCTTCCCCTTTCGCATTTTTAACCTCTCCATATCGACCTGTG
TCTATATATACTAATCTCATTTCATGGACAACCGAGACGACAACATGGGG
CAGTACGAAGTGTTGACGTTTGTTCCCAATGTAATAGGTAAGTCTGAGGA
CTGGCATTTAAGATAACTCTCCAAGCAGAGGAGTGGGTCCGGCAGGTTTT
TGACGTGTTTTTAGGCGTTTTTGTCGAGCTTTCTACTTTGTCATGTTTTT
TTTTTGTCTAGCCAAGGACATTATATAATGTCCTTGGTCTAGCCAACCCA
CAAAAAAAACATGACAAAGAAGAAAGCCCGACATTAACCCCGAATTAAGG
TGTATGTACCCCGACTTGTAGCATATGTACCCCGACTTGTAGCGTATGTA
CCCCGACTTGTAGCGTATGTACCCCTACTTGTAGGGTATGTACCCCTACT
TGTAGCGTATGTACCCCGACCTGTAGCGTATGTACCCCGACCTGTAGCAT
ATGTACCCCGACCTGTAGCGTATGTACCCCGACTTGTNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAGCGTATGTACCCCGACT
TGTTGCGTATGTATCCCGACCTTAAGGTCTCATTCTTGTATTACTCCGAG
TGGGTACCCTAGAAGAGTCCGTTGCCCAAAATAAGAACGGCTGCATATAC
GTGTGTCTATATCGGTTTAAATCCCTTTTAGCTGGCCCAGCTGATATCAA
GCGTCAAACTGATGAAAGCTTGTTTGTAACGAAAGAAACTAACAGGTAAA
GTTCGGCAGCCGCGCGCGAGGTCGGACGTCCACAGCCGGACATTGGCGGT
AATTCGGTCGATCACTTTCAGCTGCAAAGTACCTATTTAGGGGGTCTAGC
AAAGTGCCGTTTGTAATTGCCATAAAAAGGTATTGTATGCCAACTGGTAG
TTGGCAATTTTTTAAAATGATCTAGGGTAGATGAGCTCAACAGAGAATGA
ATGACATTGGTGCATTTCTTATAGCTTCATTGCGAACGCGCTCATGTAAA
ACACGTTTTANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTAG
CGTATGTACCCCGACTTGTAGCGTATGTACCCCGACTTGTAGCGTATGTA
CCCCGACCTGAAGCGTATGTGACCCAACTTGTAGCGTATGTACCCCGACT
TGTAGCGTTTAAATGGTCCTTTCCAAAGATACTCTCCAAGCAGAGGAANG
TCCGTTTTCAGATATAAACCATCATTGCATCTTAGTGCATCATTTAACAT
TTAAAGATGTTTATCAACACAGTACAGCGTGATTAATGTCCTTATGTTTT
CTTCTTCAACAGACTATGTTCGCATCGTCTTGCTCCTCGTTGCCTACTAC
CACATGCTTGATGACCCTGTTATCGGCTCCGTGTGCTACTTCAGTAACGT
CATCCTAGATGAAGTAAACNTGAATTATATCAGTTGATCATCTTCTCTAT
CCAAATAACAAGTTCAAAGTATGAAAGTCTTATCTTAGAAAAGAAGGCTA
TTGTAGCATTTCCTCATAAACTATGTGAATGAGGCTCTCAATTATGCAAA
ATATGTATTCATTTGCATATTGCTTTCTATCGATATTCCTCTCTTTCTCA
GTTACCTATGTTACGTGTTTGAGAGTCCTATAATGGAGTGCAACAGATTT
ATAAACTTTCCTTATTAATTATGCAAATTACCTACTTATTTGTATAATTA
GCATGCGATTTTGTCAATCATCACTACCAACGATCTACCTACCAAATATT
ATGACGATCCGTCAACGCTTTCTTGAGATATTCACTTTCCAAATCGGCTC
CTGCAGTTCCAACTGCTATGGGGCCCAAACCTTCACAACATACTTCTCCC
AGGTCCTATCTACCACTCAAAATCATGACCATAGCATGTCCACAACACGA
GATATCAAACCCGGAAGTTCCGCTGCAGTACCATAGTAAGCCATTAGGGG
CCCAAAATCGAATCTACTCATTTTGAGGTCTCAAAAAGACCTACCCACAT
ACCAAGTATCAAGACAATCCATCCAGGTACTCTCGAGTTATACTGTCTAC
ACACACACGCACACACACGCACGCACACACACACACACACACACACACAC
ACACACACACACGAACACTGTACAAAACATACCCTTCTCGGCAAAGGTAA
TAATAAAACAGTGTTACTCACATGTTACCATGTGATCGTCCGTTTTCAGA
TATAAACCATCATTGCATCTTAGTGCATCATTTAACATTTAAAGATGTTT
ATCAACACAGTACAGCGTGATTAATGTCCTTATGTTTTCTTCTTCAACAG
ACTATGTTCGCATCGTCTTGCTCCTCGTTGCCTACTACCACATGCTTGAT
GACCCTGTTATCGGCTCCGTGTGCTACTTCAGTAACGTCATCCTAGATGA
AGTAAACGGCTATGCCGCCCGCTTGTTCAACCAATGTAAGACAATGAGAT
CAATATATGAACTATTGCATTAGTTTACAGACTCTGAGATATTGCAGGAA
AGGCTAGAAATAACACTTAATTCCTTCATAAACATCTTTTGTCGTACAAA
GGAGCTAACAATATTATGGTAGATCCACATATCATCATGTTGGTTCAAAG
ACTCTGATAATTATCGCAAGCCATTGACAGTGTATAATGAGATCAAATCA
AAAATAGTGCACGACTTTCTTGTATAGTAGTATAGATAAACCAGGGAGTT
AGACCATAGTCATAGAGCATGAGGTTTACTGTTAATGTTAGCAATAGAAG
ATAACAGTACGTTTGGCCGCACCGATCAATTTCCTCATTTTCGGACATTA
TAAAAAAATATTTAATGTGGGCTGGGAGGAAAACTAACACATGACTATAT
TCAGTCCCTAGAGTTGTGTACACCAAAGGCGCAGACAGTATTATTCCATC
AGACATTGTTATCGGGTTAATTTTCCCGTTCAGCAATTATCTTTTTGACT
CCGAGAAGAAATTGAACTTGCATGGCCTTACCTGGCCCATCTGAATTTCT
TTGTTCCTTTACCGCAACGTTTGACTTCTTTTCCTCACTCTCCTTCTTTT
TTATTTGCGAGAAATGCCTCAGACCACACTACCCTTACAATAAAATGCAA
TAATCATGTACATTATCACTAATACATTGTTGTACCTGTACGTCTGTAGG
CACTCGTTTCGGGAGTCAGTTGGACATACTGGTAGATCTAGTGGGTACCT
GTGGGCTGCTGACGGTGCTGTGTATGCTGTACCCGAGATGGGCCATGGTC
TTCCAGGTCAGCACAGCACTGGACATCTCAAGCCACTGGATGCACTTTTA
CAGGTGCTTGTTAGAGGGTTTATTAAGTCTATCTTTATTATACATGAATA
TATATATACATATATATATATATATATACAGTATATATATATATGTATAT
AACAGAGAGAAAGAGAGATAGAGAGAGAGAGAGAGAGAGAAAGAGAGAGA
GAGAGAGAGAGAGAGAGAGAGAGAGAAAGAGAGAGAGAGAGAGAGATGAG
GTATCATGAAGAGGGTTTTAAATTTCATTTCTTTATTGGATTGGAGAGTT
TGATCCCACAACCATTGCAAACAAATAGAGCAACATTACAGCTTAACACT
CCAGCTATTTCACCGGCACCCAAAGCTACATATGAAGGATTTTGGGCGAT
TTAGAATTCCTTAATATGTCACAGCTGTAACCCCGATTCACTAGAAAATA
CGGACCGTCCCAATACACGATAATGGCTGTAAAGACTATTACTTTGAAAT
GAAGATTCGGGGTTTACCTGTTACAACTTTTCTTTCCCCGAAGCACAATC
TCACTGATGAAGTCTGCGACCCACAAGATGGCAAATTTCGCCAGCCCACT
CCTGAACCTGTACTACTCCAACTCGGTCAGTATTCAGAGTGTTAACATTT
CATACTTCATGCTGAAATACATTGTGTAGATCAGAAGCTATCACTACTAG
CTGTGACAACGACCTTATCTGCATGTTGACGATGACCTTTGTTGCATTTT
CATTCCCAGAAGGGCTAAATGCCGTGCGTTTAATAAATAAAAGGGAAAAA
GACAAGCATGTACTATTTTACAATTTGTACCACTAAGTAACAATCAGATA
ATATTTTGTGGTTAATTTGGGGGTATATAAAGGGTTTGGGGTATCATTTG
AAAACTTGCACAGGCTGTAGAGACATGTCACATTTCTTCACATTCCAGCA
CTTTATGCGTGTCATGTGCATTGGCAATCAGGCCTGTTACATCATGTTGT
ACCTGCGGTACTTCACACCAGGACCATTTTGTGAGTCATCCGCCATTCAA
TGTGATTTGTATAATATAAATGAGACAAAACTGTATGAAGTTGTGTTGAC
ATTATTAAATGATGTGGCNTTTATTAGATGATGTGGCGGGAAGGTTATAT
ATAGTAGTTTTAAACTCTGAAGATAAAAGCATTCCAGAGAAGGCATATGA
AACTTCACATTGACTAAAATTACTTTTCTGGTAAAAATATTTTAACACAG
GTTTGACCAATCCTCTGCTCTTCTTCCAGATAACTGAGGACCCAGTTGCT
CGGCACACGTCACCTCCCGAAAGTGTAACGTAAGCATGAGGTCAAAGGTG
GTTGAACGGGGGCCGGTACAGACTTTCAACCACCTTTGACCCGGTGCTGA
CGTCACATTTCTAGAAAGTGGTGTCTACTTAGCAACCGGGTCCTCCGTTA
TCCTGAGGGTTGGAGTGAAATGCTATTCCATGACGTTACGTACCAACACA
ATTGACCTTTTATGTTAGATCTCTTTCAAAGTTTTATTTCACTTTTGTCC
ATGTGAAGGGCCATTCACGAGAGTCGGTCTGTATGCAGTACTCTTCTACC
TGTGTCTCCCTGTGGCACTGCTGAAGGCCTACATCAACTGTGTGCAGCTG
CAGGAAGCAGTAAGGACAATCACTGAAGTGGACATGCAAGAGAGAAAACA
AGCGCTGGCATATTAAAGACAAAGACATTACCAGAACAAACCGGAAAATC
CTTCCCAAATGGATTTCACTTGGAGAGGGTTTTTTCCAGGTTATTGGTGG
ATTGAAGACGAAACGTGGAAGCTCTGCATGTCATAAGACAGCGGGCCAAT
CGCGAGTCTCAAAATACCAGAAAGAGTTTCTACTTTCTGCCGTATCTTTC
ACGTGATGACTGGTGTGCGCTTAGGTAGTGGACCGCTTCATCTGCGAGGC
AAACTAGTGGGCGGATAGCTTTGTTTTTTTTTTTACATAAAATAATGTAC
ATCCGCGCATACAAAGGCTGCTTCAGACAGATTTGGTTGAAAGCTTATAA
ACAATACATCCTTTCCCAACATTCTATAATTTCATGTATAGTGTGGATAT
AACGGTTACGTCCTGTTTACATTTTTGTCCAGCATACTACAAGGCAAAGA
TGTTGCAAACATGTATTTTCTTGACATTATCATATCTGGACTTGCAAATG
TAACACTATATAGGGTCAGTATATCATAGTTTTCTTTAAATTATAAATGT
ACGTGCGTTATAATGTGCAACTTGCTTTTCCGGCCTGGAACATTAATACG
GAAGGAAGGGGCAAAAATATGGATAATAACCCTCTGATCCCGCGGCCTCA
AAAAGGCCATGGGACTACCTGTACGAGTGTCTTTATGACGTGGAAATAGG
ATATGAAGTAGATTAATCATGCTGTCGCGAAAGTAGCAACTTAACTCTTG
ATGCACATAGAGACACGCCAGTTGTGAAGTACCTGCTGTATGTAGAATAT
CTAGAGACGACTACAAATGCTGCATTCACGTGGGAATAAAAAGTGAGGTC
AAAATACT Coding sequence (CDS) from alignment at Sc0000086:548813..555770- >Blg00309.5 ID=Blg00309.5|Name=Blg00309.5|organism=Branchiostoma lanceolatum|type=CDS|length=501bp|location=Sequence derived from alignment at Sc0000086:548813..555770- (Branchiostoma lanceolatum)
ATGGACAACCGAGACGACAACATGGGGCAGTACGAAGTGTTGACGTTTGT
TCCCAATGTAATAGACTATGTTCGCATCGTCTTGCTCCTCGTTGCCTACT
ACCACATGCTTGATGACCCTGTTATCGGCTCCGTGTGCTACTTCAGTAAC
GTCATCCTAGATGAAGTAAACGGCTATGCCGCCCGCTTGTTCAACCAATG
CACTCGTTTCGGGAGTCAGTTGGACATACTGGTAGATCTAGTGGGTACCT
GTGGGCTGCTGACGGTGCTGTGTATGCTGTACCCGAGATGGGCCATGGTC
TTCCAGGTCAGCACAGCACTGGACATCTCAAGCCACTGGATGCACTTTTA
CAGCACAATCTCACTGATGAAGTCTGCGACCCACAAGATGGCAAATTTCG
CCAGCCCACTCCTGAACCTGTACTACTCCAACTCGGGCCATTCACGAGAG
TCGGTCTGTATGCAGTACTCTTCTACCTGTGTCTCCCTGTGGCACTGCTG
A
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| Blg00309.5-exon-Sc0000086-1570713199:555534..555770 | Blg00309.5-exon-Sc0000086-1570713199:555534..555770 | Branchiostoma lanceolatum | exon |
| Blg00309.5-exon-Sc0000086-1570713199:552186..552320 | Blg00309.5-exon-Sc0000086-1570713199:552186..552320 | Branchiostoma lanceolatum | exon |
| Blg00309.5-exon-Sc0000086-1570713199:551318..551471 | Blg00309.5-exon-Sc0000086-1570713199:551318..551471 | Branchiostoma lanceolatum | exon |
| Blg00309.5-exon-Sc0000086-1570713199:550746..550827 | Blg00309.5-exon-Sc0000086-1570713199:550746..550827 | Branchiostoma lanceolatum | exon |
| Blg00309.5-exon-Sc0000086-1570713199:548813..549812 | Blg00309.5-exon-Sc0000086-1570713199:548813..549812 | Branchiostoma lanceolatum | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| Sc0000086 | genome | Sc0000086:548813..555770 - |
Properties
| Property Name | Value |
|---|
| GeneID | Blg00309 |
|
