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Sequence
The following sequences are available for this feature:
mRNA from alignment at Sc0000086:548813..555731- Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >Blg00309.3 ID=Blg00309.3|Name=Blg00309.3|organism=Branchiostoma lanceolatum|type=mRNA|length=6919bp|location=Sequence derived from alignment at Sc0000086:548813..555731- (Branchiostoma lanceolatum)
CTAATAGCTACATTTTGACCCGAAGAGAACTTTAAGCTATATTTTCATAT
ACAAATATACCACCGATAAGCTTCCCCTTTCGCATTTTTAACCTCTCCAT
ATCGACCTGTGTCTATATATACTAATCTCATTTCATGGACAACCGAGACG
ACAACATGGGGCAGTACGAAGTGTTGACGTTTGTTCCCAATGTAATAGGT
AAGTCTGAGGACTGGCATTTAAGATAACTCTCCAAGCAGAGGAGTGGGTC
CGGCAGGTTTTTGACGTGTTTTTAGGCGTTTTTGTCGAGCTTTCTACTTT
GTCATGTTTTTTTTTTGTCTAGCCAAGGACATTATATAATGTCCTTGGTC
TAGCCAACCCACAAAAAAAACATGACAAAGAAGAAAGCCCGACATTAACC
CCGAATTAAGGTGTATGTACCCCGACTTGTAGCATATGTACCCCGACTTG
TAGCGTATGTACCCCGACTTGTAGCGTATGTACCCCTACTTGTAGGGTAT
GTACCCCTACTTGTAGCGTATGTACCCCGACCTGTAGCGTATGTACCCCG
ACCTGTAGCATATGTACCCCGACCTGTAGCGTATGTACCCCGACTTGTNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAGCGTAT
GTACCCCGACTTGTTGCGTATGTATCCCGACCTTAAGGTCTCATTCTTGT
ATTACTCCGAGTGGGTACCCTAGAAGAGTCCGTTGCCCAAAATAAGAACG
GCTGCATATACGTGTGTCTATATCGGTTTAAATCCCTTTTAGCTGGCCCA
GCTGATATCAAGCGTCAAACTGATGAAAGCTTGTTTGTAACGAAAGAAAC
TAACAGGTAAAGTTCGGCAGCCGCGCGCGAGGTCGGACGTCCACAGCCGG
ACATTGGCGGTAATTCGGTCGATCACTTTCAGCTGCAAAGTACCTATTTA
GGGGGTCTAGCAAAGTGCCGTTTGTAATTGCCATAAAAAGGTATTGTATG
CCAACTGGTAGTTGGCAATTTTTTAAAATGATCTAGGGTAGATGAGCTCA
ACAGAGAATGAATGACATTGGTGCATTTCTTATAGCTTCATTGCGAACGC
GCTCATGTAAAACACGTTTTANNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNTAGCGTATGTACCCCGACTTGTAGCGTATGTACCCCGACTTG
TAGCGTATGTACCCCGACCTGAAGCGTATGTGACCCAACTTGTAGCGTAT
GTACCCCGACTTGTAGCGTTTAAATGGTCCTTTCCAAAGATACTCTCCAA
GCAGAGGAANGTCCGTTTTCAGATATAAACCATCATTGCATCTTAGTGCA
TCATTTAACATTTAAAGATGTTTATCAACACAGTACAGCGTGATTAATGT
CCTTATGTTTTCTTCTTCAACAGACTATGTTCGCATCGTCTTGCTCCTCG
TTGCCTACTACCACATGCTTGATGACCCTGTTATCGGCTCCGTGTGCTAC
TTCAGTAACGTCATCCTAGATGAAGTAAACNTGAATTATATCAGTTGATC
ATCTTCTCTATCCAAATAACAAGTTCAAAGTATGAAAGTCTTATCTTAGA
AAAGAAGGCTATTGTAGCATTTCCTCATAAACTATGTGAATGAGGCTCTC
AATTATGCAAAATATGTATTCATTTGCATATTGCTTTCTATCGATATTCC
TCTCTTTCTCAGTTACCTATGTTACGTGTTTGAGAGTCCTATAATGGAGT
GCAACAGATTTATAAACTTTCCTTATTAATTATGCAAATTACCTACTTAT
TTGTATAATTAGCATGCGATTTTGTCAATCATCACTACCAACGATCTACC
TACCAAATATTATGACGATCCGTCAACGCTTTCTTGAGATATTCACTTTC
CAAATCGGCTCCTGCAGTTCCAACTGCTATGGGGCCCAAACCTTCACAAC
ATACTTCTCCCAGGTCCTATCTACCACTCAAAATCATGACCATAGCATGT
CCACAACACGAGATATCAAACCCGGAAGTTCCGCTGCAGTACCATAGTAA
GCCATTAGGGGCCCAAAATCGAATCTACTCATTTTGAGGTCTCAAAAAGA
CCTACCCACATACCAAGTATCAAGACAATCCATCCAGGTACTCTCGAGTT
ATACTGTCTACACACACACGCACACACACGCACGCACACACACACACACA
CACACACACACACACACACACACGAACACTGTACAAAACATACCCTTCTC
GGCAAAGGTAATAATAAAACAGTGTTACTCACATGTTACCATGTGATCGT
CCGTTTTCAGATATAAACCATCATTGCATCTTAGTGCATCATTTAACATT
TAAAGATGTTTATCAACACAGTACAGCGTGATTAATGTCCTTATGTTTTC
TTCTTCAACAGACTATGTTCGCATCGTCTTGCTCCTCGTTGCCTACTACC
ACATGCTTGATGACCCTGTTATCGGCTCCGTGTGCTACTTCAGTAACGTC
ATCCTAGATGAAGTAAACGGCTATGCCGCCCGCTTGTTCAACCAATGTAA
GACAATGAGATCAATATATGAACTATTGCATTAGTTTACAGACTCTGAGA
TATTGCAGGAAAGGCTAGAAATAACACTTAATTCCTTCATAAACATCTTT
TGTCGTACAAAGGAGCTAACAATATTATGGTAGATCCACATATCATCATG
TTGGTTCAAAGACTCTGATAATTATCGCAAGCCATTGACAGTGTATAATG
AGATCAAATCAAAAATAGTGCACGACTTTCTTGTATAGTAGTATAGATAA
ACCAGGGAGTTAGACCATAGTCATAGAGCATGAGGTTTACTGTTAATGTT
AGCAATAGAAGATAACAGTACGTTTGGCCGCACCGATCAATTTCCTCATT
TTCGGACATTATAAAAAAATATTTAATGTGGGCTGGGAGGAAAACTAACA
CATGACTATATTCAGTCCCTAGAGTTGTGTACACCAAAGGCGCAGACAGT
ATTATTCCATCAGACATTGTTATCGGGTTAATTTTCCCGTTCAGCAATTA
TCTTTTTGACTCCGAGAAGAAATTGAACTTGCATGGCCTTACCTGGCCCA
TCTGAATTTCTTTGTTCCTTTACCGCAACGTTTGACTTCTTTTCCTCACT
CTCCTTCTTTTTTATTTGCGAGAAATGCCTCAGACCACACTACCCTTACA
ATAAAATGCAATAATCATGTACATTATCACTAATACATTGTTGTACCTGT
ACGTCTGTAGGCACTCGTTTCGGGAGTCAGTTGGACATACTGGTAGATCT
AGTGGGTACCTGTGGGCTGCTGACGGTGCTGTGTATGCTGTACCCGAGAT
GGGCCATGGTCTTCCAGGTCAGCACAGCACTGGACATCTCAAGCCACTGG
ATGCACTTTTACAGGTGCTTGTTAGAGGGTTTATTAAGTCTATCTTTATT
ATACATGAATATATATATACATATATATATATATATATACAGTATATATA
TATATGTATATAACAGAGAGAAAGAGAGATAGAGAGAGAGAGAGAGAGAG
AAAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAAAGAGAGAGAGAG
AGAGAGATGAGGTATCATGAAGAGGGTTTTAAATTTCATTTCTTTATTGG
ATTGGAGAGTTTGATCCCACAACCATTGCAAACAAATAGAGCAACATTAC
AGCTTAACACTCCAGCTATTTCACCGGCACCCAAAGCTACATATGAAGGA
TTTTGGGCGATTTAGAATTCCTTAATATGTCACAGCTGTAACCCCGATTC
ACTAGAAAATACGGACCGTCCCAATACACGATAATGGCTGTAAAGACTAT
TACTTTGAAATGAAGATTCGGGGTTTACCTGTTACAACTTTTCTTTCCCC
GAAGCACAATCTCACTGATGAAGTCTGCGACCCACAAGATGGCAAATTTC
GCCAGCCCACTCCTGAACCTGTACTACTCCAACTCGGTCAGTATTCAGAG
TGTTAACATTTCATACTTCATGCTGAAATACATTGTGTAGATCAGAAGCT
ATCACTACTAGCTGTGACAACGACCTTATCTGCATGTTGACGATGACCTT
TGTTGCATTTTCATTCCCAGAAGGGCTAAATGCCGTGCGTTTAATAAATA
AAAGGGAAAAAGACAAGCATGTACTATTTTACAATTTGTACCACTAAGTA
ACAATCAGATAATATTTTGTGGTTAATTTGGGGGTATATAAAGGGTTTGG
GGTATCATTTGAAAACTTGCACAGGCTGTAGAGACATGTCACATTTCTTC
ACATTCCAGCACTTTATGCGTGTCATGTGCATTGGCAATCAGGCCTGTTA
CATCATGTTGTACCTGCGGTACTTCACACCAGGACCATTTTGTGAGTCAT
CCGCCATTCAATGTGATTTGTATAATATAAATGAGACAAAACTGTATGAA
GTTGTGTTGACATTATTAAATGATGTGGCNTTTATTAGATGATGTGGCGG
GAAGGTTATATATAGTAGTTTTAAACTCTGAAGATAAAAGCATTCCAGAG
AAGGCATATGAAACTTCACATTGACTAAAATTACTTTTCTGGTAAAAATA
TTTTAACACAGGTTTGACCAATCCTCTGCTCTTCTTCCAGATAACTGAGG
ACCCAGTTGCTCGGCACACGTCACCTCCCGAAAGTGTAACGTAAGCATGA
GGTCAAAGGTGGTTGAACGGGGGCCGGTACAGACTTTCAACCACCTTTGA
CCCGGTGCTGACGTCACATTTCTAGAAAGTGGTGTCTACTTAGCAACCGG
GTCCTCCGTTATCCTGAGGGTTGGAGTGAAATGCTATTCCATGACGTTAC
GTACCAACACAATTGACCTTTTATGTTAGATCTCTTTCAAAGTTTTATTT
CACTTTTGTCCATGTGAAGGGCCATTCACGAGAGTCGGTCTGTATGCAGT
ACTCTTCTACCTGTGTCTCCCTGTGGCACTGCTGAAGGCCTACATCAACT
GTGTGCAGCTGCAGGAAGCAGTAAGGACAATCACTGAAGTGGACATGCAA
GAGAGAAAACAAGCGCTGGCATATTAAAGACAAAGACATTACCAGAACAA
ACCGGAAAATCCTTCCCAAATGGATTTCACTTGGAGAGGGTTTTTTCCAG
GTTATTGGTGGATTGAAGACGAAACGTGGAAGCTCTGCATGTCATAAGAC
AGCGGGCCAATCGCGAGTCTCAAAATACCAGAAAGAGTTTCTACTTTCTG
CCGTATCTTTCACGTGATGACTGGTGTGCGCTTAGGTAGTGGACCGCTTC
ATCTGCGAGGCAAACTAGTGGGCGGATAGCTTTGTTTTTTTTTTTACATA
AAATAATGTACATCCGCGCATACAAAGGCTGCTTCAGACAGATTTGGTTG
AAAGCTTATAAACAATACATCCTTTCCCAACATTCTATAATTTCATGTAT
AGTGTGGATATAACGGTTACGTCCTGTTTACATTTTTGTCCAGCATACTA
CAAGGCAAAGATGTTGCAAACATGTATTTTCTTGACATTATCATATCTGG
ACTTGCAAATGTAACACTATATAGGGTCAGTATATCATAGTTTTCTTTAA
ATTATAAATGTACGTGCGTTATAATGTGCAACTTGCTTTTCCGGCCTGGA
ACATTAATACGGAAGGAAGGGGCAAAAATATGGATAATAACCCTCTGATC
CCGCGGCCTCAAAAAGGCCATGGGACTACCTGTACGAGTGTCTTTATGAC
GTGGAAATAGGATATGAAGTAGATTAATCATGCTGTCGCGAAAGTAGCAA
CTTAACTCTTGATGCACATAGAGACACGCCAGTTGTGAAGTACCTGCTGT
ATGTAGAATATCTAGAGACGACTACAAATGCTGCATTCACGTGGGAATAA
AAAGTGAGGTCAAAATACT Coding sequence (CDS) from alignment at Sc0000086:548813..555731- >Blg00309.3 ID=Blg00309.3|Name=Blg00309.3|organism=Branchiostoma lanceolatum|type=CDS|length=381bp|location=Sequence derived from alignment at Sc0000086:548813..555731- (Branchiostoma lanceolatum)
ATGGACAACCGAGACGACAACATGGGGCAGTACGAAGTGTTGACGTTTGT
TCCCAATGTAATAGACTATGTTCGCATCGTCTTGCTCCTCGTTGCCTACT
ACCACATGCTTGATGACCCTGTTATCGGCTCCGTGTGCTACTTCAGTAAC
GTCATCCTAGATGAAGTAAACGGCTATGCCGCCCGCTTGTTCAACCAATG
CACTCGTTTCGGGAGTCAGTTGGACATACTGGTAGATCTAGTGGGTACCT
GTGGGCTGCTGACGGTGCTGTGTATGCTGTACCCGAGATGGGCCATGGTC
TTCCAGGTCAGCACAGCACTGGACATCTCAAGCCACTGGATGCACTTTTA
CAGGTGCTTGTTAGAGGCACAATCTCACTGA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| Blg00309.3-exon-Sc0000086-1570713199:555534..555731 | Blg00309.3-exon-Sc0000086-1570713199:555534..555731 | Branchiostoma lanceolatum | exon |
| Blg00309.3-exon-Sc0000086-1570713199:552186..552320 | Blg00309.3-exon-Sc0000086-1570713199:552186..552320 | Branchiostoma lanceolatum | exon |
| Blg00309.3-exon-Sc0000086-1570713199:551304..551471 | Blg00309.3-exon-Sc0000086-1570713199:551304..551471 | Branchiostoma lanceolatum | exon |
| Blg00309.3-exon-Sc0000086-1570713199:550746..550827 | Blg00309.3-exon-Sc0000086-1570713199:550746..550827 | Branchiostoma lanceolatum | exon |
| Blg00309.3-exon-Sc0000086-1570713199:548813..549839 | Blg00309.3-exon-Sc0000086-1570713199:548813..549839 | Branchiostoma lanceolatum | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| Sc0000086 | genome | Sc0000086:548813..555731 - |
Properties
| Property Name | Value |
|---|
| GeneID | Blg00309 |
|
