Blg00296.0 (mRNA) - B. lanceolatum

Overview
NameBlg00296.0
Unique NameBlg00296.0
TypemRNA
OrganismBranchiostoma lanceolatum (Amphioxus)



Sequence
The following sequences are available for this feature:

mRNA from alignment at Sc0000086:85697..92021-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>Blg00296.0 ID=Blg00296.0|Name=Blg00296.0|organism=Branchiostoma lanceolatum|type=mRNA|length=6325bp|location=Sequence derived from alignment at Sc0000086:85697..92021- (Branchiostoma lanceolatum)
ATGGCAGGTATGGACGTTTCATGAACGTTAACATTTAGCGGATGCATTCG ACGGTTTGAACATGTTTTCTTTACCCACAGCGTATAGCTAGCTACGAGCT TTAGGAAAGAATGAAGCAATTACATGTAAGAATGGATTGATTTCCGACAG GGCTGCTGAAGGTGGGAAACTTGGCGCAACTCTCTCCAGAGCGGTATTCG GCAGCATTTAGAGCCTTTCGGGCGGCAGTAGAGAAGGGGAAAAATAGCCT CCAGGTGCTGTATGGATCAAAGATTCCCGACTCTACCCTGTGTGAGCCGG GAGCCGACCTACGTGTGCTTGGGATAGGGAGTGGATCAGGTGAGACCGCC ATGTTGTCCTTGTGACGTCAGTGTCAAACCGGATAGGAACTGATCATTAT TGTAAAGTCCTGCAGTTCCCCAAAATAACAATAATAAACACAATATTGAA AAAAAAAAAACGTAATACCTTTTCAGGAGAGATCGACTGCATCATCTTAA AAAAGCTTCTACAGCGCCACAACAGTGTGTACAACAGGGTTGTGGAACCG TCCAAAGACATGCTCGGGCGATACAAGGTGGGAATCATTTGTACTCCTGT CTCATCCATTTTCAACAATTTCAATGTCATACAAATAGTCTGAGGGGGTT AAAGCCTGTACTGTGCCAGATGCACACATTTTCATAGAGTGAACAGAATC AGTTTTTATCCCGTTTTGCCAGACAAGTACTAGTGTAACTAGAGTTCGAC GACCTCATGCCTTCCCATTCTATTTAGTTTATTATGCAAATGGTGCCCTC AAGTTACATACACAATTTATATGAAAGGCCTTAGATAGAAAGAGAGGTAG AGAGGGGGAGAGAGATAGGAGATAGAGAGATAGGAGATAGATAGATAGAT AGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAG GCTTTTGCTTTGATCATACTCGCTCTGATTCATTACTTTCCCACACCTTT TGCTTGACGTTAGAGGAACTCAATAGTTTCGTGTCACTGTAACTCTATAG GCACTGGTGCGTGAAGACACGAGTCTCGGTGCTGTGAAGTTTGACTGGCG CCAGCAGACAGCGGAAGAGTACTTCCAGACAAAGGAGGACACGAAGTTCC ACTTGGTCCATGCAGTCCACGTTCTGTACGAAGTGGAAGATCATGACGTC ATCTTGCGGAAGATGTGGGAACAGCTTTCGGACGGTGGCTACATGTATGT TGCCATGCAGTCAGGTAGTACTGGAAGCTCAGTTTTATTATTGAAGGAAA CCTCAAAGATGTATTCTGACAACAGCCTCTTTGTATCAAACACACATCTG CTGTTGGTGCTGTCTCTCGCTACGTTACATTCATAACTTTATTGCATTGA TATGATTTGAACACGGTCGAACTTACATGCATAACTAAAAGTGCAAGACT CCAAAGTTGTCGTTTTCTCATGGCCTTATAGCTTATAACCAATGTGCGTG TTAGTGAGCGTGTAAGTGTGAGTATGTCGACAGAGACTTTTATCGGGATC TCAACGGCAGAACCATCTCAATCTCTACCCTAACATATACAGGTACATGT ACATGTATACTGTCTGAGTTACCCATACTAGTTATTTTCTACTGTAAACT CACACACCCTTAATTCTGTTTCCTGTTTCCATATTCACAGACAAAGGTGA CTGCGGAAGGCTCCGTTGCAAGTTGTGGGATGATTTCGGCAAAGGTGACC GTTTGAAAACGTCATTCCGCATGTCCGGTGACGTCAAACAGTGGCTTGAC ACAGCGGGCATCAGTTACGTCACTTCGGAGGCCCAAATCTATATCAACGT TACAGAGTGTTTTAAGGAGAACTCAGAAACAGGAAAGTTGCTTCTGGACT TTTTGACACACACGCCTTACGTGTCCAGCGAGACCGAAATAAGAGCAATG GTCCTGGAGTACATAAGGTGCAATTCGTCATTAGTTGATGATAGAATCAT CTTCAAATCGGTCAACGAGGTTATCCTGGCATTAAAAACTGTGTGAAAAA AATGAAAGAGAAGATCATCGGATGACCTGCTTCACCAGGCCATACATATC ATAACGTAATGGTGCACGAGTGTCACGCAGCATGATTTCAACATGTCCGC ATGTTTTGCTCGCAAGTTAGAATTAAAGGGTGTGCTTAAAGTACAATATC ACTCTGGATCCTGTACTGGTTCTGTAAACCAGTCATGTACAGAGAGGGGT GATACAGTGATATATGAATGGAACAGCTTGCATCATGCAATATGGCTGTT TTAGAAATGAATTTCTACTATCAGTACCATAGTAAAATATCCCTACCGTA ATAAGAACCAACATTTCCACTGATAGATTCAGACACATGTTTTGTGATAA CAGACAGAAAAATGTTGTTTGGAACTCCGTTCCGAGAATAAACGTCAATT AAAAAATAACATATACCTTGGCAGTCTGCACTTGTTTGAAGTGGCTTAAG CCAAGAGAAGCTCGTAGCGCTCTGGCGTTTGGTATTTTTAACCAGTTTAG ATCAATTGCTCCTTTTGCTTTGTCCTCGTACCCTTAACTTTCGCTAACCA TATTTTTTGTGTCGAGTAACTGTTAATTAGTGTAAGTGACTGCGTACCGA TCATGATGAAGTCAACTCAAATCGTCTCAAGGCTTTTTAAGAAATTCAAT CTACTGATGTGATTTTTCATTAACGTCAGCACATTGTTAGCAAATCAAAG TCATTGCCAAATGTTTATGAATGAAGGGCGTGGCCTACCTATTCTCCAAG CAGAGGTTTCGGGGGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGGGGGGGGGGGGGGGGGGG GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG GGGGGGGGGGGGGGGGGGGGGGGGGGTACATGTGTAGTATTGGCCAGGAT TTTGTGTAGGTAGGGAAACGTTAAAAATCGTGGACCTTACTAGCCCCCGG ACCTCTGCTTGGAGAATATGGCCTTCCCACCTCCAATTATGTTGGCTGGA GGTCAAATCACGAGGGTCAAGGTAAAGCGAACTTTGACAGCGCCATGGCA GGTATGGACATTTCATGAACATTTACTGGATGCATTATACGTTACAGTCA CTACCCACATAACCATTGTATAGCTAACTTCGAACAAGGCATGATACTAA GATGCATGATACAGTGATATTAAACCTCCTTGGATATACGAATGGAACAG TGTGCGTCATGCAGTGACAATTTTAGACGGCCTTCAGGAAATAATGAAGC ATTTTACATATAAGAATGAGCAACGTTTACAATTGCCCTGATAAGTGAAT TGCATTCCGACAGGGCTGCAGAAGTTGGGAAACTTGGCGCGAGTCTCTCC AGAGCGGTATTTGGCAGGTTTTAGAGCCTTTCAAAGGCGGGCGGTAGTAG GGAAGGAGAAAGATAGCCTCCAGGTGCTGTACGGATCAAAGGTCCCAGAC TCTACCCTGTGTGAGCCGGGAACCGACGTACGTGTGCTGGGGATAGGGAG TGGATCAGGTGAGACCGCCATGTTGACCTTGTGACGTCAGTGTCAAACTG GTCCCGGATAGAAATTGATCATTGTTGTGAAGTCCTGCAGTTCCCCAAAA CAGCAATAAACTAAAGGTCAGGTGAACCATTTTCAAACTGGATCTTTGTC CCTACAACCGTTACACACCTACTAAAGAATCCAATCACAGTTTCTCGAGT TATGCTCTTGACATACATGCAGACCCAGCCCCACCATGGGCGTAACTGAA AACATAACCTTCTCGGCGAAGGTAAAAACACAATATTGTTCCCAAAACAG CAATAAAAAACACAATATTGAAAAAAAATACGTAATGCCATTTTTCAGGA GAGATTGATAGCATCATGTTAAAGAAGCTTCTACAGTACCACAACAGTGT GTATAACAGGGTTGTGGAACCGTCGGGAGAAATGCTCGGGCGATACAAGG TGCGATTCATTTGTACTTCTGTTTCATCCATTTTCAGTAGCTTCAATGCC ATACAAATTCCCAAACGAGCTCCGCGACCTCATACCTTCCCCATGTAATT TTGTCTCATTACAATGTTATTAGTATTAACTAAGGAAATCACCTGCATGA TATAACGTTATGACTTAAAATGCTCAATTCTACATAACTTGCAAATGTCA CAAAAATAAAATCTCTATCATTTACCAATAAGTTTACGCAGCCGTTGGAC GTTATTGATATGCAAATGAATCTTTTATTAGCAAAATTAATAAATGAATT ATCTCCTTTCTCCAAATCACATATTTTGCAAATATGAAGCTATTATAACA TGTCCTCATTAATTATGCAAATGATGTTGAAATTTACGTAATCTGTGTCT GATGATATTCACCTTCCTCTAACAAGCACGTGTTGCTAGTATGTTTATGC TATCATTTACCACTAAGGTTTCAAAGATTTGTTCTCATTACTTGATACAT CTCAATGATCAAGTGTCGCTGTTTTGCCCAGGCTCATTTTGCTTTGCTTA TACTTGTTCTGATTCATTATTTTGCCACACCATGGTCGTGCAAACCCGTC AAGCCCTTGTTTAAGTGATCTCATGATCACTTTTTCATATGCTTGAAGTT AGACGGCTAGAGCCAATAGTTTCTTGTCACTGTAACTCTATAGGCACTGG TGCGTGAATACACGAGTCTCGGTGCTGTGAAGTTTGACTGGCGCCAGCAG ACAACAGAAGAGTACTTCCAGACAAAGGGAGACACAAAGTTTCACCTGGT CCATGCAGTCCACGTTCTGTACTATGTGGAAGACATTCACGCCACCTTGC GGGACATGTGGGAACAAGTGGCAGATGATGGTTACATGTTGGTCGCCATG AAATCAGGTATTAATCTACTATTTATTACCTTCGTCAAGAAGGTCATTGT TTTCGTGTGCGTGTGTATGTTTGTTAACAGCATACATGTTGTAACTCGAG GAGTTTGTTGCCGTGCAGTCAGGTAGTACTAGTACTGGCAGCTCTTGATA TTGAAAAAAAACTCAAAGACGTGTCTTCTGATAACAGCTATTTCAATGTC CTTTGTCTCAAACATACACCTGCTGGAGGTGCTGTCTCTCGCTACGTTAC ATTCATAACTTTATTCCATCACTTTGATATGATTTGAACTCGGTAAAACT TTAATATGACTAAAGTGCAAGACTCCAAAGTTGTCGTTTTATCATGGGAT ATCGCCTTCATAGCCTTGAAACTTATAACCAATGTGCGTGTTAGTGAGTA TGTAAGTGCGAGTATATTGACAGAGAATCCGATCGGGATCTCAACGGCAG AACCATCTCAATCTTTACCCTAACATATAGGCACATGTATACTGTCTGAG TTATGCTTTGGTACCATTTCCAAAGCGGGCCCGGCCGGGCAGCTTGTGGG AACACAAATTGTGACATGAAAGACCACAAAAGACACAAAACGTAAGAAAT TACTCCTAACCATATGTTGTATATCATTTTGATCTGCATATTTTTATATC CCGGCCGGGCCCCGGATTGGAAATGGGACCAAAGCATCACTCATACCAGT CATTTTCTAAGTAAACCTACACACTCATAAGTCTGTTTTCCCGCTTCCAT TTCACAGACAAAGGTGACTGGGGAGGGCTGCGTTACAAGTTGTGGGAGGA GTTCGGCCAAGGTGACCGTTTGAAGACGTCATTTCGTATGCCAGGTGACG TCAAACAGTGGCTTGACACAGCGAGGATTAGTTACGTCACCTCGAAGGAT GAATACAACATCAACGTCACAGAGTGTTTTAGGGAGAACTCAGAGGCGGG AAAGTTGCTTCTCGACTTTTTAACACACACGGCTAACGTGTCCAGCGAGC CCGAAATAAAAGCAATGGCCCTGGAGTATATCAGGTGTAATTCGTCATTG GTTGATGATAAAATCTTCCTCAAATCAGTCAACGACGTTATCCTGGCATT AAAAGATCGTGCGACAGAATAGAAAAGATCATTGTATTCATTCGATTCGT ATTGACCATAACTTTGCGAATGTTATCTTGTACTTGTATCACGCAGCATA CTGAGTACATCTTTTAACATCCCGAATGCTGTACTCGAAAGGTAAAACTA AAGGGTAAGCTTCAATTATAATGATGCCACCCTGATCTATTGGCTCTGTA AACCAGGCATGTACAGGGACTGTGA

Coding sequence (CDS) from alignment at Sc0000086:85697..92021-

>Blg00296.0 ID=Blg00296.0|Name=Blg00296.0|organism=Branchiostoma lanceolatum|type=CDS|length=726bp|location=Sequence derived from alignment at Sc0000086:85697..92021- (Branchiostoma lanceolatum)
ATGGCAGGGCTGCTGAAGGTGGGAAACTTGGCGCAACTCTCTCCAGAGCG
GTATTCGGCAGCATTTAGAGCCTTTCGGGCGGCAGTAGAGAAGGGGAAAA
ATAGCCTCCAGGTGCTGTATGGATCAAAGATTCCCGACTCTACCCTGTGT
GAGCCGGGAGCCGACCTACGTGTGCTTGGGATAGGGAGTGGATCAGGAGA
GATCGACTGCATCATCTTAAAAAAGCTTCTACAGCGCCACAACAGTGTGT
ACAACAGGGTTGTGGAACCGTCCAAAGACATGCTCGGGCGATACAAGGCA
CTGGTGCGTGAAGACACGAGTCTCGGTGCTGTGAAGTTTGACTGGCGCCA
GCAGACAGCGGAAGAGTACTTCCAGACAAAGGAGGACACGAAGTTCCACT
TGGTCCATGCAGTCCACGTTCTGTACGAAGTGGAAGATCATGACGTCATC
TTGCGGAAGATGTGGGAACAGCTTTCGGACGGTGGCTACATGTATGTTGC
CATGCAGTCAGACAAAGGTGACTGGGGAGGGCTGCGTTACAAGTTGTGGG
AGGAGTTCGGCCAAGGTGACCGTTTGAAGACGTCATTTCGTATGCCAGGT
GACGTCAAACAGTGGCTTGACACAGCGAGGATTAGTTACGTCACCTCGAA
GGATGAATACAACATCAACGTCACAGAGTGTTTTAGGGAGAACTCAGAGG
CGGGAAAGCATGTACAGGGACTGTGA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Feature NameUnique NameSpeciesType
Blg00296.0Blg00296.0-proteinBranchiostoma lanceolatumpolypeptide
The following exon feature(s) are a part of this mRNA:
Feature NameUnique NameSpeciesType
Blg00296.0-exon-Sc0000086-1570713199:92015..92021Blg00296.0-exon-Sc0000086-1570713199:92015..92021Branchiostoma lanceolatumexon
Blg00296.0-exon-Sc0000086-1570713199:91683..91871Blg00296.0-exon-Sc0000086-1570713199:91683..91871Branchiostoma lanceolatumexon
Blg00296.0-exon-Sc0000086-1570713199:91445..91545Blg00296.0-exon-Sc0000086-1570713199:91445..91545Branchiostoma lanceolatumexon
Blg00296.0-exon-Sc0000086-1570713199:90758..90971Blg00296.0-exon-Sc0000086-1570713199:90758..90971Branchiostoma lanceolatumexon
Blg00296.0-exon-Sc0000086-1570713199:86069..86264Blg00296.0-exon-Sc0000086-1570713199:86069..86264Branchiostoma lanceolatumexon
Blg00296.0-exon-Sc0000086-1570713199:85697..85715Blg00296.0-exon-Sc0000086-1570713199:85697..85715Branchiostoma lanceolatumexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Sc0000086genomeSc0000086:85697..92021 -
Properties
Property NameValue
GeneIDBlg00296