Blg00290.0 (mRNA) - B. lanceolatum

Overview
NameBlg00290.0
Unique NameBlg00290.0
TypemRNA
OrganismBranchiostoma lanceolatum (Amphioxus)



Sequence
The following sequences are available for this feature:

mRNA from alignment at Sc0000086:243617..246605+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>Blg00290.0 ID=Blg00290.0|Name=Blg00290.0|organism=Branchiostoma lanceolatum|type=mRNA|length=2989bp|location=Sequence derived from alignment at Sc0000086:243617..246605+ (Branchiostoma lanceolatum)
CGAAAAAATCGGACATTTCTTCCTGTGTTTCTTCCTATGTTAGGTCCTAT CCCATAAGCTCTGTGATAGGAACTTATCTATCTATACCAAAGTCATTTTT GTAGTCAAACCATGGACTTAGCCAGACCAGGCCCTAAGATTTCTACAGGG TATTTGAGGGGCAGAAGATCTCTAACGGCAGGGAAAGACGACAAGAAACC CTCTGTGGGCGGCGACAAACGGCTCTCGGCGAGCTCTCGGGACAGGAGGG CGTCGGCCGACGTGTTGGAGAGGCGCAGTCTGACTAGTGTTGGCAGGAGG GGAAGTTCTGAGGAAAAGAGGATTTCCACTGGATCCGTGACCGGAAAGGG AAAGGCTAAACAGGTAACTGCTGTTAATAATTATATGGCTTGCCAAATAA ATAAGACAGCAGAAACCCCATGGCTGCGAGGTGATGGCATTGTAGGATTT ATTATATTAGTTGTACTGTTTGTGAAATGAATAGAGACATGCTGTACATC AACGTTGTCTACTTAGAGCTGTTTACATAGTAAACAAGCCATCTTTCTTC CAAAGTTCGAATTCATATCAAGGTATAACAGCTCCTAGAGCAAAGGGACC ATGACAAACGTCTGTGTATGTACAATAAATGCAATGAAGTGAAGAGGCTT TTCGCTAGGTGGCGCTTCAGTGCGGTTTCCTCTCTCTGTGTTTCAGGAAG CGAAGAAAGCCTCGGTAGTAGACACGCCGCGCGTTAGTCAGGAGGTGTGC GATAAAATAAACGACGAGGTGAGCACATTGATATGTATACATATGTATGA CAGTGACACAGAATGAGCCATGTTTATACAATCGATGCATTTTCAAAACT CTAAAAGTATCAAGTAACACAATGCCTATTATATTATCATAAAATTTTGT CATTTGAGATTTTATTTCCTGGCGCTCTGCATATTTCTGTCAAGTTTCCC ATGCAATATTTTCTCCAAATCGCATAAACATTCTCTTTGGTACATCCCTT TAACTGCTTTCTTCCTTCAGATCATGTCAGAAGACGAAACTCAGAATGAA ATTGAGGAGCTACAGGAGGGTCTTCTCACCCTGCGGATCATGCTAACGGA CCTACAGGACTTACGGGCCATGCGGGACAGGTATCTGAGTTGATACACAG TCTCTACCGACCGTACCCTTAATACATTTATACGCCAATGCGGTCGCAAT TACTGCATACCGCCATACGACACTTACACTCTTATATTTCATCACTCATG TAGGTTTTTATGTGCGCAGTGCAGTACGTCATTTTGTCTTCATATATCAT AGCACCTTTTCATACAGAAATCTTTATTGACACAACAAAAGTACAGCGAC TTTCGTAAGTTCTACTACATCTATACATGCAAACAAACAGTCGATCAAGT GTGCATGAGTAATATTGTTCTTTTCCGTACGGATTGAAATTGTCAACGGA GAATCAGTTGCAATACCTCATGTGCTAACGTTTGCCGTTGTGGTATCTTT CTCCGTCGTTTCTAGGACCCGCGGAGTGAGAGGTGTGGTGCTGGGCGTGA CGGACATGGCCACCTCCCTCAGTCGGGACCAGGTGGTCTGGGTCCCGTTC GTGTCGTCATCACTGATCGTCCTGTTGCTGTGTCAACTCGTGCGCCTCTT CTTTCGCTGATGTTATGCTAAATATTAATTAATAATGCGCCTCGACCGAA GGGTTCACGCCTCTGACAGAGTTGGTGTGTTAAGCCCCCTCTCACTGGGC CCGCGGCACGCTGGCGGCGTCCCTGTGGCCGATCGAATTGACAAAGCACT CAACGAATTTCATCGACAAAAAACAAATATTTTTAAGCTTTGTGTGTTTT GTTGTCTTTTTTGGTCGTACTTGTACGTTTTGAATGATATTCCATTATAA AGTCAATGGTTACACAAATCCAGTTTAGGACGCAGCGACGCCGGCAGGGC ACGGGGGTCCGGTGAGAGGGGTCATAAAACTCTTCATGAAGGTGCAGAAT CGCCATGGCAAATATTTCCTGTTACTCTTCACGTCCTAATTAAGCCACGT CAAGTTGTAAAACGTCCAGGAGTGTAAAGGGGCTGCGCTGCAGATCCTCT AGTGCATTGATATTTGCCCGCGTTTATGGTGCACCTGCCATATGTCTGTC CTTGGTGCTGAAAGGTCCCCTACTGAGTCTCCCGAAAGAATCGTAGTGAA AAGGAGCGCGATTTAGTCAGGCTAACTTGTATCCTTCAGTCCATATCAAA TGTGCAACATATAGGGACAAGTACATTTAAAGTTTAATGATCAAAAAGAA CAAACGAATACTATATAAATAAGACATCAGACGATAGCTTTGCCCATGTG AACATCAAAACCAGTATAAATTGGTCCTTTATACGACCCTGTGCCTACTT ACTCTCTTGCTTAACGTAAAGAAAAGTGCCCAACATATTTTTAAACCTAC TGCAGTTTTTTGGCTAAACTAACGTCAAGACATCTAACAATATACTGAAA GTGCAAAAAAATAAATCAAACAGAAAACTACAGGAAATAAGCTAAAGGAA ATCCACTTCTACCTACAAATACCAACATTGCTACAGTAAAATTTTAGTGA TATAATCAACATGAAAATAGCATAATCATGATTTTAGCTAATTCACAATG GAAGATCTAATATCTAAAAAAAAATAGGTCTAATATCTAGACAATAGTGA GTGCCCTTACAATACAATGATTCAAAAAGTTACTTATCACCCATAAACAA AATGTTACATTCTATTACACTACTAAAAAATAAGACAAATCTAATTGAAA GACAGCAGACAATATGACTCTTTCTCATAAGGTACTTTAACCACATGATT TGGTCTTGAGTGACAAAACTAGATTATCAAACATTAAAGCACTAACCATG TTTTTTCCATGCTTATGATTTGTTACTGTGTAAAATATGGAGTGAATATA AAAATATTCATCAAGGAAGAATTGAACATTGGATTTTTC

Coding sequence (CDS) from alignment at Sc0000086:243617..246605+

>Blg00290.0 ID=Blg00290.0|Name=Blg00290.0|organism=Branchiostoma lanceolatum|type=CDS|length=579bp|location=Sequence derived from alignment at Sc0000086:243617..246605+ (Branchiostoma lanceolatum)
ATGGACTTAGCCAGACCAGGCCCTAAGATTTCTACAGGGTATTTGAGGGG
CAGAAGATCTCTAACGGCAGGGAAAGACGACAAGAAACCCTCTGTGGGCG
GCGACAAACGGCTCTCGGCGAGCTCTCGGGACAGGAGGGCGTCGGCCGAC
GTGTTGGAGAGGCGCAGTCTGACTAGTGTTGGCAGGAGGGGAAGTTCTGA
GGAAAAGAGGATTTCCACTGGATCCGTGACCGGAAAGGGAAAGGCTAAAC
AGGAAGCGAAGAAAGCCTCGGTAGTAGACACGCCGCGCGTTAGTCAGGAG
GTGTGCGATAAAATAAACGACGAGATCATGTCAGAAGACGAAACTCAGAA
TGAAATTGAGGAGCTACAGGAGGGTCTTCTCACCCTGCGGATCATGCTAA
CGGACCTACAGGACTTACGGGCCATGCGGGACAGGACCCGCGGAGTGAGA
GGTGTGGTGCTGGGCGTGACGGACATGGCCACCTCCCTCAGTCGGGACCA
GGTGGTCTGGGTCCCGTTCGTGTCGTCATCACTGATCGTCCTGTTGCTGT
GTCAACTCGTGCGCCTCTTCTTTCGCTGA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Feature NameUnique NameSpeciesType
Blg00290.0Blg00290.0-proteinBranchiostoma lanceolatumpolypeptide
The following exon feature(s) are a part of this mRNA:
Feature NameUnique NameSpeciesType
Blg00290.0-exon-Sc0000086-1570713199:243617..243979Blg00290.0-exon-Sc0000086-1570713199:243617..243979Branchiostoma lanceolatumexon
Blg00290.0-exon-Sc0000086-1570713199:244313..244384Blg00290.0-exon-Sc0000086-1570713199:244313..244384Branchiostoma lanceolatumexon
Blg00290.0-exon-Sc0000086-1570713199:244637..244746Blg00290.0-exon-Sc0000086-1570713199:244637..244746Branchiostoma lanceolatumexon
Blg00290.0-exon-Sc0000086-1570713199:245132..246605Blg00290.0-exon-Sc0000086-1570713199:245132..246605Branchiostoma lanceolatumexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Sc0000086genomeSc0000086:243617..246605 +
Properties
Property NameValue
GeneIDBlg00290