|
|
Sequence
The following sequences are available for this feature:
mRNA from alignment at Sc0000086:1052291..1056054+ Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below. >Blg00289.0 ID=Blg00289.0|Name=Blg00289.0|organism=Branchiostoma lanceolatum|type=mRNA|length=3764bp|location=Sequence derived from alignment at Sc0000086:1052291..1056054+ (Branchiostoma lanceolatum)
ATGATCGTAGGTATTAAAGCGTCAGGGGAGAAGGTTAAATTTCGTAATTT
TCGCAAGAAAATTATGACCCAGTCAAGTCTACGGCTATCAACAAAAGTCA
ACGCGTGGACAATGTGAGCCAAGGAGAACAAAGCGTAATACTGTAACTTC
ATGCCCGAATGCTGATTGTGGGTGACCTTGCCATATGTTATTGTGTTTAC
AGGATTACAGATGGGCACTTTGACAAGAGGGAAGCCGGGACGGCCCGTTG
ATCCACCGGACGGAGGTTGGGGGTGGATGGTCGCCCTCGCCGGTTTCGTC
GTGTGCGCATGCTCGTACGGAGTGACGCGGTCCCTCGGAGTGTTCTTCGT
GACTTGGCAGGACTACTTTTCTGTGACAGCCGCACAAACCGGTCTGATCC
AGTCTATCATCACAGGAGTCTTAAACTTAGCAGGTAAAGAAAAAATTATG
GATTATGATATAGCTTTGAGACTGGTCCTAAATGTCATAGGCCTAAAGCA
TTATAGACTCATAGACTCATTAAATGCAATGAGTGTCATATATTAAAGAT
CATTAAACCTTAAGCTTGTGTACACATGCAGTGTGTCTACTAATTTTCAA
CTTGGGTGTAGCTAAGTACATACATCCGTCAATGACAAACGTGCCACAAT
TGGTAAATCAATACCTTAATCAAATATACACATTATACGTATAATGTGCA
CAATTCGAGTCTTAGTAATGCCTATGTTGCATGATATCCTTATTGAGGTC
TTATCTTGTTACGAAGGAATTGTTGCATTTTTTATAAAGTCTTCTATTGA
ATTTGAAATTTGCACTTGGGCAGGAATCTGTTAAGTGGTCCGCTACATCA
GCTTGGCTGCCTGGCGCTCCACTATGTATTGTCTTGTTGCAATTTTTAAT
AAAGAATCTGAAATACGCAAATGTCTAGCTAACTTATATGTGGTATTTGA
TGATCAAAGAATTTGGACTTTTTCATCGTTTAATATGAGTTCAATTTAAC
ATCCAGAGAATAATGCAGATGACGTACGTACAATCCAATTATAAACTTAT
ATCTGTTAACAAATACATACAAAAATGGCTACGATTGCTCTGATGCCTTT
AAGACACTCCCCATCCTAGCACCAATCGCAGGAGCTCTGAGCAACAGGTT
TGGGTGCAGAGTTGTGGTCATGGCCGGCGGAGTGATATCTTCGGCAGGAT
TCGTGTTGAGTCTGTGGGCCTCGTCACTCTCCCATCTTTACCTCACCGTT
GGCTTTTTAACAGGTTAACAGTTTAACTACGTTTCTTTTTTTCTTTAATA
AAAGCAATTAATGTGGGTTTCTGGCACATTCATTTTTTTTACAATGTTCT
TATTGGGGATTCGGGCGTTTACTTTTCATTTTTATGAAGCCTTCACTTTT
TGTAATTTACAAGTTTTCTTTATGGTTAATGTTTCAAATGCATTACGACT
TGTGTTTGTTGCCAAATGCCTAGTTTTTTGCTGAATATGACTTACACAGA
CGAGAATGTGTTCGCCAAAGTTGATATCAACAATCGCTGTCATTGTGATT
GTGCCATATTTCACCCTTATTCACCACTGTAATAATTGAACGGTAGAGTT
TCGTAGATTATTAAAAGATTCACAAATTGATGGATTTACTTTTTCATCCT
CAGGGTTTGGATACTCCCTATCCTTGATCACTACCATGGCAACAATAGGN
CCCTATCCTTGATCACTACAATGGCAACAATAGGAAGATATTTCACCACT
CATAGACTTCGCGCCAACAGTTTCGCTTCTATAGGCAACAGTATCGTGTC
TTTCGCGTTCCCTCCGTTATTCCAGTACCTCATGGACGAGTACACGTGGA
GGGGTGCTTTACTTCTTATCGGAGGGATCGTTCTTCAGGTAGCCGGGTTT
GGGGCATTGGTACGACCCATCGTTCTGAAAGGTGACGTCACTCCCAAATG
TGACAGAACTGGTGACGTCATTATAAAACAGTCTTCAACCAATGGCGAGA
AACTGTTAGAAAACTCGAGTACAGCTGAGTCGACCCCACATACGACACGT
GAGACTGTCATGGGGAAACTTAGTTCTGTCATAGATGTAAAACTACTGAC
AGAGCCGCGTTTTATAGTGTTTGGAACGGCCGTCTTTCTGTTCGGATTCG
GTCGCTTCGTTCCCAACATATACCTAGTCCCACGGGCACGGGCCTTCGGT
GTTGAAGAATACCCCTCGGCCTTCCTGCTGTCCATCCTCGCCATAGGAGA
CATCATTGGCCGAGCTTCGGTGGTGTTGTTACCGGAGTGGTCGGGGTTCA
GGCGTGTGGATCAGTACGCCGTCAACATTTTCCTTATGGGAGTGGTCACG
TTGTTCGCGCCTCTTGCTAAGACATACGCCACCATGGCAGTGTACAGCGG
GTTCTATGGTTTACTCATGGGCGGGTGTGTCCCGCTTTTGTACTCTGCCA
TTGCAGAAATTGGGGGAGCCAACAGGATTTCCAGCTCTCTTGGCATCGCC
ATGTTCATACGAGGTATAGGAAACCTTGCAGGACCGCCTATTTCAGGTGA
GCATCCTTTTTGTTTCTACTCTAAGAGAGTTCACAATAATCATTGTGTAT
GACTTTTAACGCTAGTTCACCATTAATTGATGAACATCTGTCAAAACAAT
CTTGGAGTTATCAATATTTCATATATCGATATCCCTAAATACACCGTTTT
TAAAAATCCCGGTTTTATGTTACACCGCGGATATAGGTGAAGTAACGTCA
CATGACATATACGTATTGTTTTCATACCTACACAATGCATACATACTTAT
TGTACTTCTGTGCGGTTCTTGCAAAACCACATATGCCAATATCGAGATTC
CTTTACAATAGCTTTAACATTTGAATTATGTACAACTATAAGGACTTATG
AAATATTTGTTTGGATCAATCAGGGTGGCTGCGAGACATAACAGGAAGTT
TCGACGCGACTCTGTTGGAGGCGGGTGGCTGCATGGTACTTGCCGGACTT
CTACTGTCTCTACTTCGCCTACCCATGTTTCAAAACACAGAAACGGAGGA
AGACATTGTGGAACCCGAAGTTAAATGCTTATTAACGGCTGAGAAAGTAC
AAACAGAGACAGTGTCAGTCCAAACTCACATCTTCAGAGAAACTACATGT
TGATGACTTAGAATGAAAGAATGATTAAAAAAGAGCGTCTGTAACTATTG
GTGTCTTGGTACATGTTGTGGAGAACTAGTTATGATTTATGTTTCGTACT
ATCCGCGAAAATGGCCAATTCAACATGATTTATACTTCTTTATACTTTAT
TGTTTATTGTCAAACGCCAGATATTCATATCCAGACTAAAAGATTATGCA
ACCATTGTAATGAAAGTGATCAAATACTTTATAGGCTCCAGAATTTGAAA
CAATCAAACAATAACAGCTTGACATTTGGGACCATGGTATTAAAAGTAAA
CAATCAAAAATTGTATGTCAACATGGATATGGTATGCTCTTTACTTTAGT
ATATGACTTATTGTCTTGTTTACTTTTTTAATCGTGAGAGCTTGGAAGAT
ATTTGCTTATTGAAAGGCTCGTTTGGCTTGGAATGAATGGCAGTGAAGCA
GAAAAGTTTCCCAGACATGTTTGGATGATACATATATGGCATATATGTTC
ATTTCAAGGCTCCTATTTCATGTTACAAAGGGATCAAATGCTAAATGAGT
TTTTGAAGATACCAGTGACATATACTTTGTAATACAATGGTTTGCCTTAC
AGACGCAGAAATAG Coding sequence (CDS) from alignment at Sc0000086:1052291..1056054+ >Blg00289.0 ID=Blg00289.0|Name=Blg00289.0|organism=Branchiostoma lanceolatum|type=CDS|length=633bp|location=Sequence derived from alignment at Sc0000086:1052291..1056054+ (Branchiostoma lanceolatum)
ATGATCGTAGGATTACAGATGGGCACTTTGACAAGAGGGAAGCCGGGACG
GCCCGTTGATCCACCGGACGGAGGTTGGGGGTGGATGGTCGCCCTCGCCG
GTTTCGTCGTGTGCGCATGCTCGTACGGAGTGACGCGGTCCCTCGGAGTG
TTCTTCGTGACTTGGCAGGACTACTTTTCTGTGACAGCCGCACAAACCGG
TCTGATCCAGTCTATCATCACAGGAGTCTTAAACTTAGCAGCACCAATCG
CAGGAGCTCTGAGCAACAGGTTTGGGTGCAGAGTTGTGGTCATGGCCGGC
GGAGTGATATCTTCGGCAGGATTCGTGTTGAGTCTGTGGGCCTCGTCACT
CTCCCATCTTTACCTCACCGTTGGCTTTTTAACAGAAATTGGGGGAGCCA
ACAGGATTTCCAGCTCTCTTGGCATCGCCATGTTCATACGAGGTATAGGA
AACCTTGCAGGACCGCCTATTTCAGGGTGGCTGCGAGACATAACAGGAAG
TTTCGACGCGACTCTGTTGGAGGCGGGTGGCTGCATGGTACTTGCCGGAC
TTCTACTGTCTCTACTTCGCCTACCCATGTTTCAAAACACAGAAACGGAG
GAAGACATTGTGGAACCCGAAACGCAGAAATAG
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| Blg00289.0-exon-Sc0000086-1570713199:1052291..1052300 | Blg00289.0-exon-Sc0000086-1570713199:1052291..1052300 | Branchiostoma lanceolatum | exon |
| Blg00289.0-exon-Sc0000086-1570713199:1052493..1052723 | Blg00289.0-exon-Sc0000086-1570713199:1052493..1052723 | Branchiostoma lanceolatum | exon |
| Blg00289.0-exon-Sc0000086-1570713199:1053410..1053553 | Blg00289.0-exon-Sc0000086-1570713199:1053410..1053553 | Branchiostoma lanceolatum | exon |
| Blg00289.0-exon-Sc0000086-1570713199:1054747..1054836 | Blg00289.0-exon-Sc0000086-1570713199:1054747..1054836 | Branchiostoma lanceolatum | exon |
| Blg00289.0-exon-Sc0000086-1570713199:1055214..1055359 | Blg00289.0-exon-Sc0000086-1570713199:1055214..1055359 | Branchiostoma lanceolatum | exon |
| Blg00289.0-exon-Sc0000086-1570713199:1056043..1056054 | Blg00289.0-exon-Sc0000086-1570713199:1056043..1056054 | Branchiostoma lanceolatum | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| Sc0000086 | genome | Sc0000086:1052291..1056054 + |
Properties
| Property Name | Value |
|---|
| GeneID | Blg00289 |
|
