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Sequence
The following sequences are available for this feature:
mRNA from alignment at Sc0000086:525046..529445+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >Blg00287.3 ID=Blg00287.3|Name=Blg00287.3|organism=Branchiostoma lanceolatum|type=mRNA|length=4400bp|location=Sequence derived from alignment at Sc0000086:525046..529445+ (Branchiostoma lanceolatum)
GCTGTCTGTGCCAAGTAAGTTTGATTTTTTTTCAGATCCACCAGAAGGAA
ATATAATGATAACTCCTTCTTGGGTGACGGTCGGCCAGGCTGTATATCTA
GACTGCCAGGTGGACAGCAACCCTCCGCTGTCGGGCGGTGTGCGGTGGGG
CCGGGTGGGCAGGCCTCTCCCAGCCTACGATGAAGTGAACGAGCACGGTA
CGTACTACATCCCGCAGGCCCGGGCAGAGCACGGCGGATGGTACATGTGC
AGCACAAAGGACGGAATCATCTTGGCATCAAAACAACTCGTCATCCACGG
TTAGTCCATAATTTGATGACTCAGTGGATTAACATACGTATCTATTCTTT
AACATATAAGGATACATTTGACAACGTATGCTATGTTTTCAATGCTATGC
TATCAATCAATAGACGGCTCCAAAGGTCTGATACAATATCCTCTTTAATG
CCATTTGGCCTTCTTGTATCAGAATGCATGTACTGCAGTGACAGTGTGCA
TTAGAGCCATATAGTTCGAAATCATAGCGTGTTTTATAATAATGCCATAG
GTCCATTTGCTACGCCGCCGCCGCCGACTACGTCACCGACATCCACTGCC
AGAAACGGCGATATCGTCATCAGGACCCCAACTCACGTCAGAACCACACG
CACGGGCGAGAGTGTGTCCCCAGGGGCTTGGACAACGGTTAACCGGGAAG
AGCCAAGCATGGGTACGCTTTGACACTGATCATCAGTATTGGTAGTTTGG
AACGTTATCTCAAGCATTTTTTGACAATAAAGGTCTTTGATCTGAACATA
ACGGTTACACAGTTTTAAAAAATACTGCTTGTTTCGACAAAATGTATCGA
TATTCCTAATCTCAACTTTGTAACATCTTTTATTCGCAACATAGCGTGAA
TTGAAATTAAAACAACGTGACAATGATTCTTATTCGAAAGATGACACCGT
AGTTGCCGACCGTGACCCAGACGCCAGTCTGAAGCCGCTGAAGATCGCGA
CCATCACGTTAGCGTCTCTCGGCGGAGTCGCGCTGTGTCTGGTTCTGATG
GTCCGGCTCAGAGACAGGTGCAAGCGGAAGGCGCCCAGACCCGTGCCGCG
TGATAAGGAGACACGGATCGTGAACCGTGCCGGCCCCAGTCTACAGCTAA
CGCCAGACCAAGGTACGCAAGAGGGTAACAATGAAGAACATCCGATGATG
AGGTCTGACTCCGGCGTTTATGATGAGCAGGACCAAGAGCTTGGTAAGAG
GTTCACCAAAAGGGCAGTGTTTTCGATAGCGTTTGTGTGTAACAGTGTTT
GTTTGTAACGGTGGTTGTGGCTGAACAATATAAAACAAGAGGCTCTTAAC
ATTTTTTCCATGTTGGATCAAAATCTAACATGGCGACGCCCATGGATGCC
GACGAAAACAAAACAGGAATGATCTTTGCTGCATTTGATACTTGGCAATT
TTTATTAGTTCCGCTAGGTTTCGCCGTGTCGTCCAGGGCGTGTCCGTGGC
TGACAGAAGACCACCCGCTCGTCCAACAGTTGCAAGGTGTACTGATGGAC
CCAGAGCGTCTAGAGCTCGGAAGAGTGCTGGACGAGGGTAGGAATTTTTA
TTTGAGGTTTATGGTGTCGTCTTTTACTGCTGTGTACGTAGAAACAAGGT
GCATTTCTATATGGGGTCCAACGTATCATGATTTGGAACATTTGGGGAAA
GTTTTTAAATGATGTTCAGAAAGGCTGAAATTCGTCTGTTGCACTCGCTA
ACTTTATTGTCTTGCCTTACAGGGAACTTTGGTCTCGTCCGTAAAGCAGG
CCTGAGGTCGGAAGACGGGAGGATGTCAACTGTCGCTGTCAAGACACTTC
AAGGTGACAATATGTGACTAAAACGTCTAAGTAGAGCACTTCCATACATT
ACATATTTTACTTACAACTAGTCAACGTTGAAGATGTCAAACGTTCACAT
TGTGTTGAATTTACGGTAGTTGATGGGCTACGTCATATTTTCCTAACGGT
ATTTCAAAAATACAACCATCTCTTTTACGCAGCAACCTCCCACGCCAGAG
CTCCAGAAGTGGCGTGTTTCCTACAGGAGGGTATCACCATGAAGGGGTTC
GACCATAAGAACGTGCTGGGGCTGATCGGCGTGTGTGTTCCCCAGGACGG
CTACCCTGTGGTCGTCCTCCCCTTCATGCAACACGGCAGCCTGCTGTCGT
ATCTAAGGAACGACGAAAATGTAAGGGACTAGAACGTTGCAGTTGGAGCT
CTTTCAGGATTGAGGTACCACAGCGATAGAAAGCTGTAGCAACCTACAGA
CCCACATCTGTGTCGTTATTTAGTCCAACGTTTTTAGTTTGACCTCCATC
CCACCGCTGCCACCAGTGTAAACGCTTGGTATACGTCTTATTCATGTCAC
GCAAGAAACTCGTATCCTTCATCAAAGCCTTTTACTATTTCAACGACCCA
CAGTCCTCCAAAGGAAGATCGTACCACCGCACTGATAGGACTTTCACAAT
TGAGAACATCGCACTCGTAGCAGAAGGCTATTACAGGGGATTTTCTGTAA
CATGTTTTCCTTTCATGCATCAGGACGTGTCTATGAAACAGGCCACCACG
TTCTGTCTGGACGTTGCGAGAGGGATGGAGTACCTGTCTAAGCTGAAGTT
TGTACACCGAGACCTGGCCGCTCGCAACTGCATGTAAGTACCGATTAAAC
GTTATGAGTTATGGTCTTGTTGATGCTTGGTCACAATCGTCATACTATAC
TTTTTTAGTCGTAGAGTTTTCAGCGAAGCTATGAATGGACGGAATCTCCG
ACAACCTTTTCCATTAGAAGACAGCTGGAGTGTGCATGTGCGAGGTCTAT
TACTGTTCTGAGAATGTACTCGATTTGTCCTAAACTAATCGTACGACGAA
TGTGACGGGCCCTATAACGACGAATGAACCTCCGACGTGCCGCTGCTTTT
CTGACGAGTAATGATCGTACAAAGCATGACACGTTGCTTACTTTTATGTG
ATACAGGGTTAACGTTAATCTGGATGTGAAGGTCGGAGACTTCGGCCTGT
CCCGCCACCTTCACACGAAGCAGTACTACCGCCTGGGGGACCAGGACGAC
CGGGAGCTGCCCATTAGGTGGATGGCACCGGAGAGCTTCCGCCGCCGGAC
CTACACCACCAAGACAGACGTGGTAAGTAAAGTATCGTAAATGTAAATTT
AGCTGTTCTCAGGATGAGACGACGCGTCAGATTCTTTTTATGGCTGGGAG
TGCCATGCGACTCCGCCACCATTGCTCATGAGGCGTCTACAAGACAACGC
CATTCTTACGAGCAAAGATGGCCAGAATGACACATTCATTGTTTTCTCCA
GGGAATATTACTTTGGAGACCTGAAACCATGGAAATGGTCCATTGGATAT
TTTCATCTGCTGGTATACATTTTTGATTACATTTGTAACTTTCAGTTTGT
GTTCTGTTCAGTGGTCGTTCGGTGTGCTGATGTGGGAGGTGATGACCCGG
GGTCTGCAGCCGTACCAGCAGCTCAACAACACTGAGGTGGCGGGCTTCGT
CTGCTCAGGGCACCGCCTGGACTGTCCCGAGTACTGCACAGAGAGGCTGT
GAGAACACTCTGCTTTTTGAAGCCTTGAAAGCCCGTTAGTTAACACAAGT
TGTCGGCTTTTCGTGTGATTTTTACCTCCGTGAACGGATGTATCGTTAAT
GGTGTGTGTGTCTGTTTGCTTGTTTGACTATTTGTTTGCATACTCATTTT
TGTCTAATAGATGTACTGACGACAGCTCGAGCTAGGAAACCAATGTGATT
ACTAACGATTGAAAGAATGGTGAATTTTAGATTGCAAAATGTAGCCAAAA
CTCTTTGTGAGAAACCCTAAAGCGGCGTTTAAGTTGTAGTGGGACTTCTC
TAGCCTCTACCAGGCTCCGTGGATCGCTGGAAAAATTGTAGAACTTGGCC
AAAAAGAGTCGGTCGGCCAAAAGGGTCCAATAGGCAAATCGTAAATTTCT
ACTATTTTTCCAGCGATCCGGAGAGCCTGGTAGAGGCTAGGACTTCCAAA
TGAATCTAGTTATCAGGCCGATAGTTCTTTGATCCTCTACCCCTATCTAA
TCAGTACGATTTTGAACCCGGTATTGGACATAAATCCCTCGTATTTCCCA
CACCATTGTTTCCCCAGGCATGGTTTGATGTTACACTGCTGGGCGGCTGA
CCCTGACGACCGACCGGCCTTCCCGGAGATCACGGCGGAGCTCGAGCGAA
CTCTGCTGGCCTCCACCGGGCACCAGTACGCCTCGCTACAGCGGTGTTAC
GTTAACTTTAACGATATAGTCTAGAGATACACAATTCCATCAAGTGTGTA
ATGTTATACTTCAACTAGAATGAACCCTGCGGGCATCTACATCACACCCA
Coding sequence (CDS) from alignment at Sc0000086:525046..529445+ >Blg00287.3 ID=Blg00287.3|Name=Blg00287.3|organism=Branchiostoma lanceolatum|type=CDS|length=1677bp|location=Sequence derived from alignment at Sc0000086:525046..529445+ (Branchiostoma lanceolatum)
ATGATAACTCCTTCTTGGGTGACGGTCGGCCAGGCTGTATATCTAGACTG
CCAGGTGGACAGCAACCCTCCGCTGTCGGGCGGTGTGCGGTGGGGCCGGG
TGGGCAGGCCTCTCCCAGCCTACGATGAAGTGAACGAGCACGGTACGTAC
TACATCCCGCAGGCCCGGGCAGAGCACGGCGGATGGTACATGTGCAGCAC
AAAGGACGGAATCATCTTGGCATCAAAACAACTCGTCATCCACGGTCCAT
TTGCTACGCCGCCGCCGCCGACTACGTCACCGACATCCACTGCCAGAAAC
GGCGATATCGTCATCAGGACCCCAACTCACGTCAGAACCACACGCACGGG
CGAGAGTGTGTCCCCAGGGGCTTGGACAACGGTTAACCGGGAAGAGCCAA
GCATGGATGACACCGTAGTTGCCGACCGTGACCCAGACGCCAGTCTGAAG
CCGCTGAAGATCGCGACCATCACGTTAGCGTCTCTCGGCGGAGTCGCGCT
GTGTCTGGTTCTGATGGTCCGGCTCAGAGACAGGTGCAAGCGGAAGGCGC
CCAGACCCGTGCCGCGTGATAAGGAGACACGGATCGTGAACCGTGCCGGC
CCCAGTCTACAGCTAACGCCAGACCAAGGTACGCAAGAGGGTAACAATGA
AGAACATCCGATGATGAGGTCTGACTCCGGCGTTTATGATGAGCAGGACC
AAGAGCTTGTTCCGCTAGGTTTCGCCGTGTCGTCCAGGGCGTGTCCGTGG
CTGACAGAAGACCACCCGCTCGTCCAACAGTTGCAAGGTGTACTGATGGA
CCCAGAGCGTCTAGAGCTCGGAAGAGTGCTGGACGAGGGGAACTTTGGTC
TCGTCCGTAAAGCAGGCCTGAGGTCGGAAGACGGGAGGATGTCAACTGTC
GCTGTCAAGACACTTCAAGCAACCTCCCACGCCAGAGCTCCAGAAGTGGC
GTGTTTCCTACAGGAGGGTATCACCATGAAGGGGTTCGACCATAAGAACG
TGCTGGGGCTGATCGGCGTGTGTGTTCCCCAGGACGGCTACCCTGTGGTC
GTCCTCCCCTTCATGCAACACGGCAGCCTGCTGTCGTATCTAAGGAACGA
CGAAAATGACGTGTCTATGAAACAGGCCACCACGTTCTGTCTGGACGTTG
CGAGAGGGATGGAGTACCTGTCTAAGCTGAAGTTTGTACACCGAGACCTG
GCCGCTCGCAACTGCATGGTTAACGTTAATCTGGATGTGAAGGTCGGAGA
CTTCGGCCTGTCCCGCCACCTTCACACGAAGCAGTACTACCGCCTGGGGG
ACCAGGACGACCGGGAGCTGCCCATTAGGTGGATGGCACCGGAGAGCTTC
CGCCGCCGGACCTACACCACCAAGACAGACGTGTGGTCGTTCGGTGTGCT
GATGTGGGAGGTGATGACCCGGGGTCTGCAGCCGTACCAGCAGCTCAACA
ACACTGAGGTGGCGGGCTTCGTCTGCTCAGGGCACCGCCTGGACTGTCCC
GAGTACTGCACAGAGAGGCTGCATGGTTTGATGTTACACTGCTGGGCGGC
TGACCCTGACGACCGACCGGCCTTCCCGGAGATCACGGCGGAGCTCGAGC
GAACTCTGCTGGCCTCCACCGGGCACCAGTACGCCTCGCTACAGCGGTGT
TACGTTAACTTTAACGATATAGTCTAG
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| Blg00287.3-exon-Sc0000086-1570713199:525046..525344 | Blg00287.3-exon-Sc0000086-1570713199:525046..525344 | Branchiostoma lanceolatum | exon |
| Blg00287.3-exon-Sc0000086-1570713199:525596..525757 | Blg00287.3-exon-Sc0000086-1570713199:525596..525757 | Branchiostoma lanceolatum | exon |
| Blg00287.3-exon-Sc0000086-1570713199:525986..526288 | Blg00287.3-exon-Sc0000086-1570713199:525986..526288 | Branchiostoma lanceolatum | exon |
| Blg00287.3-exon-Sc0000086-1570713199:526504..526632 | Blg00287.3-exon-Sc0000086-1570713199:526504..526632 | Branchiostoma lanceolatum | exon |
| Blg00287.3-exon-Sc0000086-1570713199:526818..526898 | Blg00287.3-exon-Sc0000086-1570713199:526818..526898 | Branchiostoma lanceolatum | exon |
| Blg00287.3-exon-Sc0000086-1570713199:527078..527265 | Blg00287.3-exon-Sc0000086-1570713199:527078..527265 | Branchiostoma lanceolatum | exon |
| Blg00287.3-exon-Sc0000086-1570713199:527619..527728 | Blg00287.3-exon-Sc0000086-1570713199:527619..527728 | Branchiostoma lanceolatum | exon |
| Blg00287.3-exon-Sc0000086-1570713199:528052..528217 | Blg00287.3-exon-Sc0000086-1570713199:528052..528217 | Branchiostoma lanceolatum | exon |
| Blg00287.3-exon-Sc0000086-1570713199:528507..528643 | Blg00287.3-exon-Sc0000086-1570713199:528507..528643 | Branchiostoma lanceolatum | exon |
| Blg00287.3-exon-Sc0000086-1570713199:529213..529445 | Blg00287.3-exon-Sc0000086-1570713199:529213..529445 | Branchiostoma lanceolatum | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| Sc0000086 | genome | Sc0000086:525046..529445 + |
Properties
| Property Name | Value |
|---|
| GeneID | Blg00287 |
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