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Sequence
The following sequences are available for this feature:
mRNA from alignment at Sc0000086:523618..529445+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >Blg00287.2 ID=Blg00287.2|Name=Blg00287.2|organism=Branchiostoma lanceolatum|type=mRNA|length=5828bp|location=Sequence derived from alignment at Sc0000086:523618..529445+ (Branchiostoma lanceolatum) ATTGTCATATTGCCTTATGAATCACAGACGTTTCATGTTCAACGGCGGCG
TGGGTCCATGTGGAGACGACGCCCTCCCCTGTGCCCGCCGTGCCGGGAGG
GACGGTAACTCTCCCCTGTGCCTACACCGCGAGTCACCCCGACTCCGGCG
GCGTCACCATCACCTGGTGGCGGGAACCCACCGTGCCGTCTGACACACGA
CAGATCGTGTACGAGGCCCGGCGTCCCGGGGACCCAGGCGGCCGGGGGTA
CGACCAGTGGGACGGGCGCACGTCTATGGCCGGCCAGGCGTCGTTACGGA
TAGAGAGAGTCCGTACGGAGGACGCCGGGACGTACGAATGTGAGATTAGG
AACTTCCAGCACGGAGCTGGCCGTGGCTACGTCACCCTTAACGTTATCGG
TACGTTCAGCCTGTACGTTCAGTTAGTAACTGCCATATTCTGTTCAAACC
ATTTTAAAGGGGTGAAACCTTACAGATGTGCACGGTCAGCCCAACTTAGG
GTACTTAATGTTACATCTCTATTGTATTGTCCTGGACGTCCAAATATCGT
ATATCAATAGCCCGGACCACGACTTGTATATCAACCCCACTATCATTTTC
GTTTCCTTTTCCGTTTGGTTGGTTGGTTGTTGGCTGTCATTACAATGTAT
TGTGATAATGTACATCTAATTCCTTTTCTCAGTACCAAGAGTTGACATGG
TATAGTATTACATATGCCGTGTTTGTTAAAATCACGAATCGTGGATCATG
GATATGTTCTGTTTTTCAGTTCCCGCCAACCCACCGCGTATCCATGGCAA
CACGCCGTCACCTGCCGGCTCCACCCTCACCCTCACCTGCACGTCTACAG
GTGGGCACCCTGCACCTGGAATCACCTGGACAAAGGCCGGACAACCCGTA
GGACAAACACCTGTGTCCACTACCGACTCACAGGTGTCATCCACGCTCAA
CCTGCGACTGTCCAAAGAGGACAACCAGGCCCGGGTGACGTGTACGGCGA
CACAGGATGGCAGACCACCTCTAGCTCACTCCGTTGTCTTGAACGTCTCC
TGTAAGTTAGTTTGCCATTACGCCGTAACGTTACATTATCAGATGACATT
CTTTTTATATTTAGCAAAAGTCACTGAATTTTCGACAGGTATTGCGGCCG
TCTACAGGAATATCAACCCACTCAATTTTGGCACGTGATCTCGTCCTGTG
TGTTTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTCTGTTTGTTTGTG
TGTGTTTCTGTATGTATTTCATACAAAAGTGATCTCGTCCCGTGTGTGCG
TGTGTGCGTGTGTGTGTGTGCATGTGTGTCTGTGTGTATGTATTTGTGTG
TCCGTGTGTCTGTTTGTTTGTGTGTGTGTGTGTGTGTGTGTGTTTCTGTG
TTTTATATTAAAAGAAAAGATGTTAATTGCTGTCTGTGCCAAGTAAGTTT
GATTTTTTTTCAGATCCACCAGAAGGAAATATAATGATAACTCCTTCTTG
GGTGACGGTCGGCCAGGCTGTATATCTAGACTGCCAGGTGGACAGCAACC
CTCCGCTGTCGGGCGGTGTGCGGTGGGGCCGGGTGGGCAGGCCTCTCCCA
GCCTACGATGAAGTGAACGAGCACGGTACGTACTACATCCCGCAGGCCCG
GGCAGAGCACGGCGGATGGTACATGTGCAGCACAAAGGACGGAATCATCT
TGGCATCAAAACAACTCGTCATCCACGGTTAGTCCATAATTTGATGACTC
AGTGGATTAACATACGTATCTATTCTTTAACATATAAGGATACATTTGAC
AACGTATGCTATGTTTTCAATGCTATGCTATCAATCAATAGACGGCTCCA
AAGGTCTGATACAATATCCTCTTTAATGCCATTTGGCCTTCTTGTATCAG
AATGCATGTACTGCAGTGACAGTGTGCATTAGAGCCATATAGTTCGAAAT
CATAGCGTGTTTTATAATAATGCCATAGGTCCATTTGCTACGCCGCCGCC
GCCGACTACGTCACCGACATCCACTGCCAGAAACGGCGATATCGTCATCA
GGACCCCAACTCACGTCAGAACCACACGCACGGGCGAGAGTGTGTCCCCA
GGGGCTTGGACAACGGTTAACCGGGAAGAGCCAAGCATGGGTACGCTTTG
ACACTGATCATCAGTATTGGTAGTTTGGAACGTTATCTCAAGCATTTTTT
GACAATAAAGGTCTTTGATCTGAACATAACGGTTACACAGTTTTAAAAAA
TACTGCTTGTTTCGACAAAATGTATCGATATTCCTAATCTCAACTTTGTA
ACATCTTTTATTCGCAACATAGCGTGAATTGAAATTAAAACAACGTGACA
ATGATTCTTATTCGAAAGATGACACCGTAGTTGCCGACCGTGACCCAGAC
GCCAGTCTGAAGCCGCTGAAGATCGCGACCATCACGTTAGCGTCTCTCGG
CGGAGTCGCGCTGTGTCTGGTTCTGATGGTCCGGCTCAGAGACAGGTGCA
AGCGGAAGGCGCCCAGACCCGTGCCGCGTGATAAGGAGACACGGATCGTG
AACCGTGCCGGCCCCAGTCTACAGCTAACGCCAGACCAAGGTACGCAAGA
GGGTAACAATGAAGAACATCCGATGATGAGGTCTGACTCCGGCGTTTATG
ATGAGCAGGACCAAGAGCTTGGTAAGAGGTTCACCAAAAGGGCAGTGTTT
TCGATAGCGTTTGTGTGTAACAGTGTTTGTTTGTAACGGTGGTTGTGGCT
GAACAATATAAAACAAGAGGCTCTTAACATTTTTTCCATGTTGGATCAAA
ATCTAACATGGCGACGCCCATGGATGCCGACGAAAACAAAACAGGAATGA
TCTTTGCTGCATTTGATACTTGGCAATTTTTATTAGTTCCGCTAGGTTTC
GCCGTGTCGTCCAGGGCGTGTCCGTGGCTGACAGAAGACCACCCGCTCGT
CCAACAGTTGCAAGGTGTACTGATGGACCCAGAGCGTCTAGAGCTCGGAA
GAGTGCTGGACGAGGGTAGGAATTTTTATTTGAGGTTTATGGTGTCGTCT
TTTACTGCTGTGTACGTAGAAACAAGGTGCATTTCTATATGGGGTCCAAC
GTATCATGATTTGGAACATTTGGGGAAAGTTTTTAAATGATGTTCAGAAA
GGCTGAAATTCGTCTGTTGCACTCGCTAACTTTATTGTCTTGCCTTACAG
GGAACTTTGGTCTCGTCCGTAAAGCAGGCCTGAGGTCGGAAGACGGGAGG
ATGTCAACTGTCGCTGTCAAGACACTTCAAGGTGACAATATGTGACTAAA
ACGTCTAAGTAGAGCACTTCCATACATTACATATTTTACTTACAACTAGT
CAACGTTGAAGATGTCAAACGTTCACATTGTGTTGAATTTACGGTAGTTG
ATGGGCTACGTCATATTTTCCTAACGGTATTTCAAAAATACAACCATCTC
TTTTACGCAGCAACCTCCCACGCCAGAGCTCCAGAAGTGGCGTGTTTCCT
ACAGGAGGGTATCACCATGAAGGGGTTCGACCATAAGAACGTGCTGGGGC
TGATCGGCGTGTGTGTTCCCCAGGACGGCTACCCTGTGGTCGTCCTCCCC
TTCATGCAACACGGCAGCCTGCTGTCGTATCTAAGGAACGACGAAAATGT
AAGGGACTAGAACGTTGCAGTTGGAGCTCTTTCAGGATTGAGGTACCACA
GCGATAGAAAGCTGTAGCAACCTACAGACCCACATCTGTGTCGTTATTTA
GTCCAACGTTTTTAGTTTGACCTCCATCCCACCGCTGCCACCAGTGTAAA
CGCTTGGTATACGTCTTATTCATGTCACGCAAGAAACTCGTATCCTTCAT
CAAAGCCTTTTACTATTTCAACGACCCACAGTCCTCCAAAGGAAGATCGT
ACCACCGCACTGATAGGACTTTCACAATTGAGAACATCGCACTCGTAGCA
GAAGGCTATTACAGGGGATTTTCTGTAACATGTTTTCCTTTCATGCATCA
GGACGTGTCTATGAAACAGGCCACCACGTTCTGTCTGGACGTTGCGAGAG
GGATGGAGTACCTGTCTAAGCTGAAGTTTGTACACCGAGACCTGGCCGCT
CGCAACTGCATGTAAGTACCGATTAAACGTTATGAGTTATGGTCTTGTTG
ATGCTTGGTCACAATCGTCATACTATACTTTTTTAGTCGTAGAGTTTTCA
GCGAAGCTATGAATGGACGGAATCTCCGACAACCTTTTCCATTAGAAGAC
AGCTGGAGTGTGCATGTGCGAGGTCTATTACTGTTCTGAGAATGTACTCG
ATTTGTCCTAAACTAATCGTACGACGAATGTGACGGGCCCTATAACGACG
AATGAACCTCCGACGTGCCGCTGCTTTTCTGACGAGTAATGATCGTACAA
AGCATGACACGTTGCTTACTTTTATGTGATACAGGGTTAACGTTAATCTG
GATGTGAAGGTCGGAGACTTCGGCCTGTCCCGCCACCTTCACACGAAGCA
GTACTACCGCCTGGGGGACCAGGACGACCGGGAGCTGCCCATTAGGTGGA
TGGCACCGGAGAGCTTCCGCCGCCGGACCTACACCACCAAGACAGACGTG
GTAAGTAAAGTATCGTAAATGTAAATTTAGCTGTTCTCAGGATGAGACGA
CGCGTCAGATTCTTTTTATGGCTGGGAGTGCCATGCGACTCCGCCACCAT
TGCTCATGAGGCGTCTACAAGACAACGCCATTCTTACGAGCAAAGATGGC
CAGAATGACACATTCATTGTTTTCTCCAGGGAATATTACTTTGGAGACCT
GAAACCATGGAAATGGTCCATTGGATATTTTCATCTGCTGGTATACATTT
TTGATTACATTTGTAACTTTCAGTTTGTGTTCTGTTCAGTGGTCGTTCGG
TGTGCTGATGTGGGAGGTGATGACCCGGGGTCTGCAGCCGTACCAGCAGC
TCAACAACACTGAGGTGGCGGGCTTCGTCTGCTCAGGGCACCGCCTGGAC
TGTCCCGAGTACTGCACAGAGAGGCTGTGAGAACACTCTGCTTTTTGAAG
CCTTGAAAGCCCGTTAGTTAACACAAGTTGTCGGCTTTTCGTGTGATTTT
TACCTCCGTGAACGGATGTATCGTTAATGGTGTGTGTGTCTGTTTGCTTG
TTTGACTATTTGTTTGCATACTCATTTTTGTCTAATAGATGTACTGACGA
CAGCTCGAGCTAGGAAACCAATGTGATTACTAACGATTGAAAGAATGGTG
AATTTTAGATTGCAAAATGTAGCCAAAACTCTTTGTGAGAAACCCTAAAG
CGGCGTTTAAGTTGTAGTGGGACTTCTCTAGCCTCTACCAGGCTCCGTGG
ATCGCTGGAAAAATTGTAGAACTTGGCCAAAAAGAGTCGGTCGGCCAAAA
GGGTCCAATAGGCAAATCGTAAATTTCTACTATTTTTCCAGCGATCCGGA
GAGCCTGGTAGAGGCTAGGACTTCCAAATGAATCTAGTTATCAGGCCGAT
AGTTCTTTGATCCTCTACCCCTATCTAATCAGTACGATTTTGAACCCGGT
ATTGGACATAAATCCCTCGTATTTCCCACACCATTGTTTCCCCAGGCATG
GTTTGATGTTACACTGCTGGGCGGCTGACCCTGACGACCGACCGGCCTTC
CCGGAGATCACGGCGGAGCTCGAGCGAACTCTGCTGGCCTCCACCGGGCA
CCAGTACGCCTCGCTACAGCGGTGTTACGTTAACTTTAACGATATAGTCT
AGAGATACACAATTCCATCAAGTGTGTAATGTTATACTTCAACTAGAATG
AACCCTGCGGGCATCTACATCACACCCA Coding sequence (CDS) from alignment at Sc0000086:523618..529445+ >Blg00287.2 ID=Blg00287.2|Name=Blg00287.2|organism=Branchiostoma lanceolatum|type=CDS|length=2103bp|location=Sequence derived from alignment at Sc0000086:523618..529445+ (Branchiostoma lanceolatum) ATGGCCGGCCAGGCGTCGTTACGGATAGAGAGAGTCCGTACGGAGGACGC CGGGACGTACGAATGTGAGATTAGGAACTTCCAGCACGGAGCTGGCCGTG GCTACGTCACCCTTAACGTTATCGTTCCCGCCAACCCACCGCGTATCCAT GGCAACACGCCGTCACCTGCCGGCTCCACCCTCACCCTCACCTGCACGTC TACAGGTGGGCACCCTGCACCTGGAATCACCTGGACAAAGGCCGGACAAC CCGTAGGACAAACACCTGTGTCCACTACCGACTCACAGGTGTCATCCACG CTCAACCTGCGACTGTCCAAAGAGGACAACCAGGCCCGGGTGACGTGTAC GGCGACACAGGATGGCAGACCACCTCTAGCTCACTCCGTTGTCTTGAACG TCTCCTATCCACCAGAAGGAAATATAATGATAACTCCTTCTTGGGTGACG GTCGGCCAGGCTGTATATCTAGACTGCCAGGTGGACAGCAACCCTCCGCT GTCGGGCGGTGTGCGGTGGGGCCGGGTGGGCAGGCCTCTCCCAGCCTACG ATGAAGTGAACGAGCACGGTACGTACTACATCCCGCAGGCCCGGGCAGAG CACGGCGGATGGTACATGTGCAGCACAAAGGACGGAATCATCTTGGCATC AAAACAACTCGTCATCCACGGTCCATTTGCTACGCCGCCGCCGCCGACTA CGTCACCGACATCCACTGCCAGAAACGGCGATATCGTCATCAGGACCCCA ACTCACGTCAGAACCACACGCACGGGCGAGAGTGTGTCCCCAGGGGCTTG GACAACGGTTAACCGGGAAGAGCCAAGCATGGATGACACCGTAGTTGCCG ACCGTGACCCAGACGCCAGTCTGAAGCCGCTGAAGATCGCGACCATCACG TTAGCGTCTCTCGGCGGAGTCGCGCTGTGTCTGGTTCTGATGGTCCGGCT CAGAGACAGGTGCAAGCGGAAGGCGCCCAGACCCGTGCCGCGTGATAAGG AGACACGGATCGTGAACCGTGCCGGCCCCAGTCTACAGCTAACGCCAGAC CAAGGTACGCAAGAGGGTAACAATGAAGAACATCCGATGATGAGGTCTGA CTCCGGCGTTTATGATGAGCAGGACCAAGAGCTTGTTCCGCTAGGTTTCG CCGTGTCGTCCAGGGCGTGTCCGTGGCTGACAGAAGACCACCCGCTCGTC CAACAGTTGCAAGGTGTACTGATGGACCCAGAGCGTCTAGAGCTCGGAAG AGTGCTGGACGAGGGGAACTTTGGTCTCGTCCGTAAAGCAGGCCTGAGGT CGGAAGACGGGAGGATGTCAACTGTCGCTGTCAAGACACTTCAAGCAACC TCCCACGCCAGAGCTCCAGAAGTGGCGTGTTTCCTACAGGAGGGTATCAC CATGAAGGGGTTCGACCATAAGAACGTGCTGGGGCTGATCGGCGTGTGTG TTCCCCAGGACGGCTACCCTGTGGTCGTCCTCCCCTTCATGCAACACGGC AGCCTGCTGTCGTATCTAAGGAACGACGAAAATGACGTGTCTATGAAACA GGCCACCACGTTCTGTCTGGACGTTGCGAGAGGGATGGAGTACCTGTCTA AGCTGAAGTTTGTACACCGAGACCTGGCCGCTCGCAACTGCATGGTTAAC GTTAATCTGGATGTGAAGGTCGGAGACTTCGGCCTGTCCCGCCACCTTCA CACGAAGCAGTACTACCGCCTGGGGGACCAGGACGACCGGGAGCTGCCCA TTAGGTGGATGGCACCGGAGAGCTTCCGCCGCCGGACCTACACCACCAAG ACAGACGTGTGGTCGTTCGGTGTGCTGATGTGGGAGGTGATGACCCGGGG TCTGCAGCCGTACCAGCAGCTCAACAACACTGAGGTGGCGGGCTTCGTCT GCTCAGGGCACCGCCTGGACTGTCCCGAGTACTGCACAGAGAGGCTGCAT GGTTTGATGTTACACTGCTGGGCGGCTGACCCTGACGACCGACCGGCCTT CCCGGAGATCACGGCGGAGCTCGAGCGAACTCTGCTGGCCTCCACCGGGC ACCAGTACGCCTCGCTACAGCGGTGTTACGTTAACTTTAACGATATAGTC TAG
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
Feature Name | Unique Name | Species | Type |
Blg00287.2-exon-Sc0000086-1570713199:523618..524016 | Blg00287.2-exon-Sc0000086-1570713199:523618..524016 | Branchiostoma lanceolatum | exon |
Blg00287.2-exon-Sc0000086-1570713199:524387..524668 | Blg00287.2-exon-Sc0000086-1570713199:524387..524668 | Branchiostoma lanceolatum | exon |
Blg00287.2-exon-Sc0000086-1570713199:525081..525344 | Blg00287.2-exon-Sc0000086-1570713199:525081..525344 | Branchiostoma lanceolatum | exon |
Blg00287.2-exon-Sc0000086-1570713199:525596..525757 | Blg00287.2-exon-Sc0000086-1570713199:525596..525757 | Branchiostoma lanceolatum | exon |
Blg00287.2-exon-Sc0000086-1570713199:525986..526288 | Blg00287.2-exon-Sc0000086-1570713199:525986..526288 | Branchiostoma lanceolatum | exon |
Blg00287.2-exon-Sc0000086-1570713199:526504..526632 | Blg00287.2-exon-Sc0000086-1570713199:526504..526632 | Branchiostoma lanceolatum | exon |
Blg00287.2-exon-Sc0000086-1570713199:526818..526898 | Blg00287.2-exon-Sc0000086-1570713199:526818..526898 | Branchiostoma lanceolatum | exon |
Blg00287.2-exon-Sc0000086-1570713199:527078..527265 | Blg00287.2-exon-Sc0000086-1570713199:527078..527265 | Branchiostoma lanceolatum | exon |
Blg00287.2-exon-Sc0000086-1570713199:527619..527728 | Blg00287.2-exon-Sc0000086-1570713199:527619..527728 | Branchiostoma lanceolatum | exon |
Blg00287.2-exon-Sc0000086-1570713199:528052..528217 | Blg00287.2-exon-Sc0000086-1570713199:528052..528217 | Branchiostoma lanceolatum | exon |
Blg00287.2-exon-Sc0000086-1570713199:528507..528643 | Blg00287.2-exon-Sc0000086-1570713199:528507..528643 | Branchiostoma lanceolatum | exon |
Blg00287.2-exon-Sc0000086-1570713199:529213..529445 | Blg00287.2-exon-Sc0000086-1570713199:529213..529445 | Branchiostoma lanceolatum | exon |
Position
The following features are aligned
Aligned Feature | Feature Type | Alignment Location |
Sc0000086 | genome | Sc0000086:523618..529445 + |
Properties
Property Name | Value |
GeneID | Blg00287 |
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