Blg00285.0 (mRNA) - B. lanceolatum

Overview
NameBlg00285.0
Unique NameBlg00285.0
TypemRNA
OrganismBranchiostoma lanceolatum (Amphioxus)



Sequence
The following sequences are available for this feature:

mRNA from alignment at Sc0000086:827028..833355-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>Blg00285.0 ID=Blg00285.0|Name=Blg00285.0|organism=Branchiostoma lanceolatum|type=mRNA|length=6328bp|location=Sequence derived from alignment at Sc0000086:827028..833355- (Branchiostoma lanceolatum)
ATGGCGGGAAGATACATTTCACCTTACGAAGAAAAACGTCTGAAGAACAT GGAGGAAAACAGACGAATCTTGGAGAGTCTGGGGCTGGTGGAGCCTGACT CGGTAAGTTGTGAGTTTGATTTATTGTCCATCCTGTTTGGTAAAATGTGG TGAAGTGTAACGTTTTGTGTTGGTTTTAGTTGTGTATCGGTCTGTCTACG TGTTTGTATGTGTTTCAGTAATACCAAGTAGTGTTCTGTGGTGCAAAATA CAGCGTTGCATGTAACGTAAAACGTTACATCCTCAGTAGGGGTGGGTACC GGTAAATAGAATTCAGGTCCGGTCCAGAGGGTCAGGTCCAGGTCCGGACC TGTACCTGTACCTGAATATAGTAGTGTCGCAGTACATCATATTTTGGAGA GCGAGACACACGCAAAAGTCTCAAAGTGTCGTGTATGGAACGATATAATT TCTTAGGTTTGCACTTTGTCTCAAAATTACATTGTATAACTATACTCTCC TCGCCGTCTCTTTACTCATCCTTTAAGTGTTTCTAGATATGATTCACAGC TAAAGTTTTCGAAAACGACACTTAAATCTGCTGTTTTGTATTTTCTTAGA CCAGTTATGTGGCCGCCTGCTGGTAGCCTGGTACTATGAATTTTCTAATC GGTCCATAGGCCGGTCCACTGATTTTTTACGGACCGTTTTTTTTGACCGG TCCAATAAGAAATACCGGTACACGGTACCGGTACCCACCCCTAATCCTCA GTATTGCTATTTTTGGCGACGCTGTAGGGACGAAGCCTATAGGTATTGTC GGTGAGACAGGATTTCTCTTTAGATATTAATTTCCTAAAGTGATCTTCTC AAATCTTTAAAGTCCATGGATCAAATCTTTGCTCATGATACATAAGGTTG GTCTGCAACTACAATGTTAACGATACAATGACTAATAGTATCCAATACAT GATTATACTGCTGTGGGCGTTCCAGACACTGGTGAGTAGCAGTCAGCTAG TCTTCACATCGCGATTCCAAGCGACTCTGTCCGGCGAGTCCATGTTGACG AGGCCGTACACCTTAATGCCCTTATTTGTTGTGCAATTAAGTTCTTAATG TGTTATCAAGCAAAACAATCAAATGTGTCTCTTTGTTGAATACAGGTGAA GCCAAAAAGGGTAGTGAAAAAGAAGGCTCCACTCAAGAGAAAGAAGAGTA TTCGTGTGCACACGCAAGCCAAGAGGGTTATATCAACTGATGGCCTAGTG AATGAACAGGTGGATACAGACCAGGATGGTTTCACACCCACCAGGAGATC TGCAAGGCTCAGAGAAAAGGTTAGTCATTTATAATCTATATTTGTATCTA TATAGCCAGTAGAACCGCCCTTCAGTGTAACACACCAGCTTCGCAGGCAC ATGGCACAGTATCAACTAGTTATATTACTCTGAGCGGCCTTTAGTACCTA ACCTTTGCACATCTTACTGTAAGCTATCTAGTGAGGATGGTCCTACAGTA CAGTACTTGTTGGCAATGAGCTCCATTCTACAATAGATCTAGTCATCTGA AGATAGTCGTTACCAACGAACATGAAGGGATATAGCATAATACTTTTTTT ATATTTTTGTTGGCCATCCGTGTTGAAACACAGTGGTTGTATATAGTATT TCTGCTAGCGCCAACTGATTGGGTCATCCATCAGGGATATTAAGTATCGA GACCAAAGTGTGAGAAATTTAGAGCCCCTGGGGTAGGCTCCTTCAGAAAG TTTTGGAATTACCAACTCTGAAATGGTATTTCTCACAATTGGAGAGACAC ATGTCAAAGGGCTTTGTGCTAACATTGGTGGCAATCACTGAGAAGTGCTG GATATTAATTGAAGTATGCACTGTTTTTAAGCAACTTGGGCACGATTTTC GAACGTTTTTAACTTCTTCTTGCTTCTGGCAGGTAGATAGGTCAAGTGTC TAATGTCTGTGTGTTGTTTTTTCCCACCAGGCTGCCCCCTCATATCAGGA GCTAAGGACTGAAGTGGATGAAGAGTTAGAGGCAGAAGAAGAGAAGGACA CTCGCTACAAACCAGTTCCTAAAGACAGACCCAATGTCTTTGGGGAAATC CCAGGTCGGTCTGTGTCTAAGTAGCTTAGTTTAACTTCTTCCTACTAAGG TACTGCAGCATGGAATAGATCAAGTGTAAGGAGGAAAAAATTGTTTTCTT AGATGTCAACAATATGTAAGAAATGCATCATAGAATTGTGTGGGTCCACC CTTAATGTTTGCACCTTCCTCTTCCCTTTGATAAATTGAATGTTTCCTTT TTCAGGTTTTCCAGTCGGTACTTGGTTTGAGAGAAGGATGGAGGCATGCC TAGCTGGAGTACACAGGTGGATGAAACAGTCACGATTGCAAATATCATAA ACATAGATAAACAGAAACTATGATGGCTCGTGCTAAGGAGCTACGGAACT AACTTTAAGAAGGCCATGCGTAATTGCTATATTAGCTCAGAACAAAATAC GATACTGAATTTCCAGCATGTCATCTATTTTATGAATTGTCAATTGTGTT CGGTAATTTTCAGTAATTTTTGCAAACTTTAAGTGGAAGTAGAATGAATA GTGCGATGTTAACTGATGATATTAGTCTCCAACCAGACCCAATAGATTGC AAAGACCGTATCCAACTGGAAGAAGGAGCTTATAGTGCAATCTAAGGTCT GGAACAAGTCGGTCTGAACAAAGGCTATCAACATCTAATTGTTACCTAAT CAAACTGTGCTTCTGTAAGTGAGTTTATTACTCTCTGTTCGCACGGGCGT GCGGCGCCATGCCGGGCTGACACCTCCAGGCCGCGACTGAGAGGCCGTTC ACTTGGGCAGGGCTGTACCGCGAAAATTAAACTTCCCAGGAAAAATAAAC TAAATGTTGCCAACAGAAAAGACTTGGTCTCTTTTTCAAAATCAATCTGT TACGAAGATCGCTACCAAAACTGCTTCAATCGTCACAAAATGCGATCAAT TTTGACCAGTTACGTCGGAACTGTAAGGGCAATTCCCGCCATGTGGTCAC GTGGAATCTTGCAGTTAATCTCTAGTAATAGTGGCTTGAACCCGAAACAG TAAACATTGTCTACGAATGTTTTTGTAAGAACGGTTTTCCATGATGCCAC AAACATCGCCGATGGGTGAAAGAAACTGCTATTGTGAGAGCTTTTTACTA GGCTCAACCAAGGCGCGAACCTCCCACTGGGACGTGCGCGGGTGACTGGG CTTGGTCATAAAAAGATTAGTACCCCGGACATTCGTACGGCTGTTAGCAT TACAACGAGGAGGGGCAGCGGCACCTTTATTGAATAGAAATGCTCCGCCC TGTTTGAGTTGTAGCAGACCTTGGGTTGGCTATGAAAACTCCTTCTGCCT GTTGGATACGGTCTTTGCCAACCCGTAGGTCTGCTTGGAGACTATGATGA TATCACTGATTGACAGGCCCCCAGTTGCTGGTGTCCATGGTAACGACTAT GAGGGTTGTTACTCCTTGGTGCTGTCGGGAGGGCATGAAGACAATGGAGA GTGCTTCACCTATACTGGAAATCACACAAAATGTAAATGTAATCTTGTAA ATAAGTCAATTGCCACTGTTGGAATTGCCACTCTTGATCCCGATGAAGCA TTGAAACCATAACACTGTACTAATATCATTTGAAGTATAGAAAATGGAAT AGTTCAATGCCTGTGTGTCAGTGCAGTAGTCAAGTGAAGTCATGCACATT TTATTAACATAAAATCAGCTACAATAGACATACATACTGGAATTTTGCAC AAACTTAACTGTTTATGTACTTCAATTCTCTATTGACTCCGCAGGTGGAC GTGACCTGAACGGGACGAAGGCCAACCCGAAGGTAGGGACATAAATCTGC TCTGTTGGAGCCAAGCACTAGCTGTGATAGGTTTATGTTAGGTTTTTCAA CTGTCTATAGTTAGTAGTATCTAATATTTGATTATACTGCTGCCGGGGTC CCTGACACTGGTGGGCAGCAGTCGGTTATTTTAGTCTTCACATCACGTGT ATAACAGACACAGAAATTCCCATCTTATCATCCTTGTATTGGAAATCCCA CGTCCAATGGAAAGATGTCCTTCCAACATGTTTGTGTTACTGTTTTCAGA ACCATCGCACTGCTCCCCAGTCTAAAGACCAGACTCTGACTCGAGGTAAG TTTTGTCACCATCCGGCTACTAGTGCAAAATGTAGCAGACACGATTTATT TGTATATTTGTTTACTATTTGTTTGCACAACAAGAAAATGCATAATACGA TCAACAATAGATAGAAAAAAAAGGTGCAGGAGGAGGAAAAGCGTTTATAG CTTATGCTAGGCCCTCCACCTCTATACTAATCACAATCAGAATTGATACA TAATATAGCAAAGTAATACATAGAATATGATAACGATAGATAGGAATAAT CAAATTATTCTCGTGTATCATACGTCTGTGTTTGTATGAGAGCATCTCTA TTCTTGGACCAGAATGACTCAGTCTTGTTCTTTCCCCTTGAAGGAAACCT GGCGCTGAGTGTGAGTGTGGAAACCCGTCGGCCCGTGCGTGTGATGAGAG GGTACAAGCTGGACAGCTCGTTCGCTCCAGAGGAGGGGTACAGATACGAT GGTACGTGTCGAGTGATACCTGTCAATCAAATTATTATGAACTTGCTGTT TCATCAGTGTGTCAATCAAATTATTATCAACTTGCTGTTTCATCAGCGTG TCAGGTGTTGTAGTTGTAGTAAGGACTGCTCTTACAGGGATCAGACTTAT CAACCTAGGATTGATGTGTAGAAAAATTTGTATTTTCCTAGAACGATCGT AGAGTGGAACTCGTTGCCATCAAGTACCGTGGAAGCATCCTCATTCGATA GCTTTAAACAATGCATGCAATTAGATATGCAAAGGTTAGACGTGACAGGT CGTTCGGTGTAATATAACTAGCTGCTGCCGCTCCGCATGTCTGTGAAACT GGTGTGTTACGCCGAAGGGCGGTTATACCGGCTATAAAGATACAGATCTT ATCAAATCTATGGCGCATTACGAAGATGAAGATATAAAATCAATTAGTCA AAGTGGATGCATTGTTCAATATTGATGGATCTTTTTAATAAGGCCTACTG GCAGTATGTGTCATTCTCTTATATACTTATTCTCTTCTTGACTTATGCCT GTACCTCACTGATTGCTTGAATACAAACTTTTCTTTTTACTTTCCATGAT TTGTACATTGAAAAATAACACCTCATGTTACAGGTCTGTACTCAGTGGAT AAGTTCTGGTTCACAGCTGGGTTGTCAGGATTTGGGGTGTACAAGTTTGT GTTGAGTAGGTGTCCAGACCAAGCCCCCCCACCATGGACGCTGCCAGCAT CTGGAGACAACTCGGTAAGCGCTTTTACCATGGATCATGATTTAGATCTG CACTGCTCAAGTAATTAGATTTGGATAAAATTTGGAAAAAAGCCATACCA ACCCATTTTCTTGGTTCTTGGAATCAGCCACTTTTTTTATCGCTGCTATA AAAAAAGAGAAAGATTGAATTCTGTGCACACTTAAACCCCCCAATGCTTA TATTTTGGTACCATGAGTTGAAGAAAGTCCTTTCCCATACAAAAATGATT TCATAATCTCATCTGACTCCCGAGGAATGTTTGTTCTGCTGTGTTTGAAT GGCTTTGAGCAGATGTACAGCTTATGAAAAAAATAAGATTTGTTAAGATC AACCCGGGACCCAGCAACAAATAGATGCAGTAAGCTTATCGTAAAAGCAC CGAGAGGTATCGGGGTGTCCCTGTGGTGTAGTGGTTGCGCCTTCTGCCTC TCACCACATCTGGTTCAAATTACTTGGACCAGAAGGACTGGGGTTCAAGC CCCAGGTAAGACACCTCTGGACAAGAGGCGCATTGAGTCATACCAAAACT TTATAAAAATGGTACATACTTCTGAAACAGTATGGAAGTTAAACACACTT CACTGCCAGTGGACTAGCCTCCTGCTACGGTGTGGCCCAGGGCTATGAAA CGGAGATGGGCACTGCCCTATACATCAATAATGGTGTGAGAGGATTTTAA CTAACTTTAACTAACCGAGAGGTATCCCACCGGGGCTAATTTGCAGCTTC AGATCCCAGCCGGGGCTACACCCCCTACGAGCACCGGTGCAAATGTGACC ACACCATTAGTGTTACTGATACATGTATACCTCTATACTCTATCCAGGAC TCTGATACAGACACAAACAAGGCAGACAGTGACTCAGGCGTCTCCATGAC AACAGGAACAGAGACAGAGTCTGACTGA

Coding sequence (CDS) from alignment at Sc0000086:827028..833355-

>Blg00285.0 ID=Blg00285.0|Name=Blg00285.0|organism=Branchiostoma lanceolatum|type=CDS|length=981bp|location=Sequence derived from alignment at Sc0000086:827028..833355- (Branchiostoma lanceolatum)
ATGGCGGGAAGATACATTTCACCTTACGAAGAAAAACGTCTGAAGAACAT
GGAGGAAAACAGACGAATCTTGGAGAGTCTGGGGCTGGTGGAGCCTGACT
CGGTGAAGCCAAAAAGGGTAGTGAAAAAGAAGGCTCCACTCAAGAGAAAG
AAGAGTATTCGTGTGCACACGCAAGCCAAGAGGGTTATATCAACTGATGG
CCTAGTGAATGAACAGGTGGATACAGACCAGGATGGTTTCACACCCACCA
GGAGATCTGCAAGGCTCAGAGAAAAGGCTGCCCCCTCATATCAGGAGCTA
AGGACTGAAGTGGATGAAGAGTTAGAGGCAGAAGAAGAGAAGGACACTCG
CTACAAACCAGTTCCTAAAGACAGACCCAATGTCTTTGGGGAAATCCCAG
GTTTTCCAGTCGGTACTTGGTTTGAGAGAAGGATGGAGGCATGCCTAGCT
GGAGTACACAGGCCCCCAGTTGCTGGTGTCCATGGTAACGACTATGAGGG
TTGTTACTCCTTGGTGCTGTCGGGAGGGCATGAAGACAATGGAGAGTGCT
TCACCTATACTGGAAATCACACAAAATGTGGACGTGACCTGAACGGGACG
AAGGCCAACCCGAAGAACCATCGCACTGCTCCCCAGTCTAAAGACCAGAC
TCTGACTCGAGGAAACCTGGCGCTGAGTGTGAGTGTGGAAACCCGTCGGC
CCGTGCGTGTGATGAGAGGGTACAAGCTGGACAGCTCGTTCGCTCCAGAG
GAGGGGTACAGATACGATGGTCTGTACTCAGTGGATAAGTTCTGGTTCAC
AGCTGGGTTGTCAGGATTTGGGGTGTACAAGTTTGTGTTGAGTAGGTGTC
CAGACCAAGCCCCCCCACCATGGACGCTGCCAGCATCTGGAGACAACTCG
GACTCTGATACAGACACAAACAAGGCAGACAGTGACTCAGGCGTCTCCAT
GACAACAGGAACAGAGACAGAGTCTGACTGA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Feature NameUnique NameSpeciesType
Blg00285.0Blg00285.0-proteinBranchiostoma lanceolatumpolypeptide
The following exon feature(s) are a part of this mRNA:
Feature NameUnique NameSpeciesType
Blg00285.0-exon-Sc0000086-1570713199:833254..833355Blg00285.0-exon-Sc0000086-1570713199:833254..833355Branchiostoma lanceolatumexon
Blg00285.0-exon-Sc0000086-1570713199:832037..832210Blg00285.0-exon-Sc0000086-1570713199:832037..832210Branchiostoma lanceolatumexon
Blg00285.0-exon-Sc0000086-1570713199:831252..831375Blg00285.0-exon-Sc0000086-1570713199:831252..831375Branchiostoma lanceolatumexon
Blg00285.0-exon-Sc0000086-1570713199:830990..831050Blg00285.0-exon-Sc0000086-1570713199:830990..831050Branchiostoma lanceolatumexon
Blg00285.0-exon-Sc0000086-1570713199:829774..829889Blg00285.0-exon-Sc0000086-1570713199:829774..829889Branchiostoma lanceolatumexon
Blg00285.0-exon-Sc0000086-1570713199:829474..829511Blg00285.0-exon-Sc0000086-1570713199:829474..829511Branchiostoma lanceolatumexon
Blg00285.0-exon-Sc0000086-1570713199:829161..829206Blg00285.0-exon-Sc0000086-1570713199:829161..829206Branchiostoma lanceolatumexon
Blg00285.0-exon-Sc0000086-1570713199:828705..828812Blg00285.0-exon-Sc0000086-1570713199:828705..828812Branchiostoma lanceolatumexon
Blg00285.0-exon-Sc0000086-1570713199:827942..828072Blg00285.0-exon-Sc0000086-1570713199:827942..828072Branchiostoma lanceolatumexon
Blg00285.0-exon-Sc0000086-1570713199:827028..827108Blg00285.0-exon-Sc0000086-1570713199:827028..827108Branchiostoma lanceolatumexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Sc0000086genomeSc0000086:827028..833355 -
Properties
Property NameValue
GeneIDBlg00285