Blg00282.3 (mRNA) - B. lanceolatum

Overview
NameBlg00282.3
Unique NameBlg00282.3
TypemRNA
OrganismBranchiostoma lanceolatum (Amphioxus)



Sequence
The following sequences are available for this feature:

mRNA from alignment at Sc0000086:578734..585444-

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>Blg00282.3 ID=Blg00282.3|Name=Blg00282.3|organism=Branchiostoma lanceolatum|type=mRNA|length=6711bp|location=Sequence derived from alignment at Sc0000086:578734..585444- (Branchiostoma lanceolatum)
TCAAGATTAAGTGGTACGTGCTGACTTCCGGGTTAGAGGTCAACATCTGC ACCAGTGTTCCCGCCTCCCCCAACTTGCATGCACCAACATTTATTGTGTG TTCAACGTTAGTAGGCGTGTTCCGAGTACGTGACTTTAGGATTTCGTTGT TTCTAGCGACATCTGCTGTTGTCTGAACCATGGGGGAACCAGACAGGATA TGGACCGAGGAGCAGGCACTGTCGGACGATGTCGGCAAGAAAGATTTGAT CAAATTTCTGCAAGACCATGCTTCCAAGGAGGTGATTTATGTTCTTTAAA AAATTCACAGAAATGTACCCTCATTGATATAAGCCCTACGTTATTTTTGC AAAAATAACGACTTTGCAATGCATACATTTAAGATGCATCTCCGCACATC TTACCAGAAATGCATATTTGACCAGAAAATATATTTTGTTGTGCACCAAT ATTTCGATCCTAGAACTAGATTGAAGATTTTTGGTGCAATGCAGCTGCAG AAATACTAATGGTGCAACGTGTTTTTCTGCAGTTTCTTGCAGATCACAAA CTGCTGGGCAGCGCCAAGAACGTCGCTAAGACAAGCAAGAAGGAAAACCT TGTGGAAGCCTACACTCAGATGTTCGACACCAAGGTAAAAGGGGTGTGAA TTAACATGTATGGCTAATTATAAATTCTTAGGGCCATATGCATGCTATGA ATAGTAATGGTGGAAGGTGTTGATCAATATGTTGACGTAGTTGCAATATT TCTATGATAGGTTTGTGTGTCATGTTGTGGGTTGATGTGTAAGGGCTCGA ATTATATTATTTGGGAAAGGACTTTACTTAGGTGCAGATGAGAAAAATGT TTGCAGGATAAGAATTTTACTAGCACAACATAAAGCTATGTTCAAATACA AGTACAAGCCTAAAATAATTAATATAATTCAGAAGTATTCTCTAGAAATA CATTTTTAGACTATTTTGTAAAAGACATTTCAAAACTAGGGGACTGAATC CTTTGCCACTTCTTCAGGTGTCCAAGAGCTATCTACCAATGAAAAATCAT GACCACAGCATGTCCAGAACATGAAATATGAAAACAGAAGTCATGCTGCA GTACCATGCAGCTGCCAGGGGGCCCTTAATCATGTGTTGATTTTGCTAAC ACCTTTCAACATATCAAAGATAATAAAGATATATCCACAATTTTTTGAGT TATGCTCTTTACAAATACATGTAGGCACAAACGCAGACCCACACACGAAA CATAACCTTCTTGGCAAAGGTGAAAGAAAGGTTTCTATAGACAAAATCTC ATCCGGGCACGCTTCTGCTTTTACATGCACACAGTAATTTGATAACATTG CTAGTAGATAAAAAAATTCATTTTTTCAGACATTTTCCATTTTTCCATCT AAATTTCAATGATTTGTTCTCTTTGCGAAGTCAGGGTAGAGATATTGGGA TGCTTGAACATATTGCAACATACTGTAGATCCTTTTACTTCTACAGTGGT TTTGCCATACAAGGGAAAAGGGTTTTTGTGGTGTTCTGAGTTCATGGTTT AAACAATACTGTAGTATATTAGTTATACAGTGGAAACAAGGATTTGTAAG GAGAGGCCACTGCAAAAACTACAAAAGCAAAACCACGAGAAAGTAAATGA ATCTTCAGTACGTAGCTCCGTTCCAAATCAAATAAGTTACATTCATGTAT TTAGGTTTGTTCGTACATGTGCTTTCTTCTGTAGACTTGTCCTGTAGATT TATCAAAGCCTAGAGTTGTTGAGAGTTAGATTTCCTCATTTTTATACATC GATATGTTGTTGTTGTTTCTTTAGAATAGGCTACAGTAGATGTATAGCTA GTCAAATTGACAATGGTCAACGTTTGTTTCAGGCATTCAAAGATGCTGCA CAGGACAAGGAGTTTGACGACATGGCTGCAAAGGCTAAAGAACTCAAGAT GTCCGAGAAACCTAAAGAAGAAGAGGAGGAAGCTGTATGGGTTATATCAT TACATAACAATAGGCGTATCAGATAAATTTGGTAATGTGCGTTTGTAACC ATGAGTAATGTTTTTCTATAATTGTTGCTTTAATCGTTGCTCTAATCTTA TGACCATAACATGTACACTTTTGGGGTCAAGCTAAGAAGGGACCAGGAAA GGCATGCCCCGTACTGGTGATTGCCAATTTTGTTACACACAAGAAATGAG ACATCAGGAGGGGGCCAGAAGTGCCCAAAAATCAACATCATCTGTCCTCC CAGTTTGAAATGNCAACATCATCTGTCCTCCCAGTTTGGAATGGTTTGAT GGCTCTTATGACTGTTAAGTGTTATGGTCTCCTTTACACCATATTCCATT ATTTTGTTGCATGTCTGTCCAGAGTTACTAGGCATGTCAGAGACACTGAC AGCAAGTTAGGTCAAAGTTCCCATAAAGGTCCCAGAATAGGCTATGAAAG GTCATCTTATTTCCTGTCTTCAATTTCGTGCTATATGCCTGTCTGTTTGT TGCCCAATGTGAAAATGCATAGACAGAATCAGAATTCACATTTAAAAACT CAGAAAAAAATCATGTTTTTTGTTTGTTTTGTTTTTCATTGTGTTGTACA TCTCTTCCTCCCCAGGCTGCAGAAGCTCCCAAGTACACCAAGCAGACCCT GAAGAAGGGTGACGGGAAGAACTTCCCCAGTAAGGGGGACCTGGTGTCCT GCTGGTACAAAGGCATGCTGGAGGACGGGACCGTGTTCGACACCAACATC TCCGATGGTCAGAACAAAAACTTATCTCTCTTCTTTACCTCCACGAAAAT AAAGGTATTGTTTTTGGTTTCTTTGTTTGTCTTTGAGTGTGGTCAAGTTT GTTTCTGTTGGCCCGAGAACACAGTTTCTGGGCACTTGTCAGGGATGCAC ATTATGCCTTCAGCATCTTTGTTTGTATTCAATATTCATATTTTAATTGA TGCGGAAACAGGACTTGCTTTGTTCACAGCCTGTCCAAGATCTGGAATGT AGATAGATATACTATAGATCTATAGATTCTATATAAGAGAAAGCACATAT TGTTTTATCATGTACTTTTAAACACATGTTAACATATTGAAAGTGTTAAA CTTTTTTTTACAGGGAGCAAGAAGAAGAAGGCAACTCCGCTGAAGTTCAA GGTTGGAACTGGCAGAGTTATTAGAGGGGTGAGTTAAAGTAGCCAATAAT TCTGCTCATTCACACAGGTTAGTCCAACAACATGTCCATCTTTAAGCTTT GCGTTTAGTATTGAATTGGCTTAGTGCCCGTACATGAAATACAGTCAAAC TTTGTACAAGCAACCTCCCTTGCAAAGGACCACTTTGTGGTAGTCCCTTT AGATTGATTGTGGTATGACGAGTTTCTTTTTTATAGTGACCACCAGTCGG CAATGGGCACTCTTGTAAAGCCCTACTCTTTGGCCTGATTCATAGAAGAA GATAATATAAGGCCAAAGCTTTTACAAAACAGCATAGAGTGAATAGCCTC ATCAAGTTGATAAGTCGTTTGAAGGTAAAGTTCTTTTAACTCAACCAGAC TTTCCACTCCTGCCAATGTTTCAGCTGCCTTTATCAGGGTGCTCTGCCAC TTCTTGCCACTAGGTGGCACCGCGGCAACAATGCAGTGACTGTGTTTATC TCCCCACTGGCAGCAAGCATTAGCAGAGTTCATTATGTTCTGATGATGAA GGCAGCTGACTAGTTAAGCAAAACGTTGGCATGTGAGAATGGTCTGCTTG TGTTGAAAGAACTTTACCCCTCTAAATGCTATGACAACAGACGTTGTTTT TTCTGAGACACAATTCTGTGTTTCAGTGGGATGAAGGCCTGATGACCATG ACTAAGGGGGAGAAAGCTAAGCTCATCATCGAGCCAGACTGGGCTTACGG TAGGAAGGGGCTAGAGAAGAAGTATCCTTTCCCTCTGTTGTTACTGACTT ATAGTCACCATATTTGTTGATTACTACAGAATGTTGCAACTTCACCCCAC GAGAGTGATATATTGATTTTGGTTTGTCTGTGTCTGTATGTATGTGTGTG TGTGCGTGTGCACATGTGCGTCCGTGTGTGACTGTGTGTGTGCATGTGTG TAGATTGCATGTTGTGTTCTTGTAAAGCTACTAATTGATATGGTGGTACT GCCCCACCCCACTCAAGATGCAACTATTGATTGCATTGAATATCTTACAA GGTTTGTGTTGCTTAGTTCTTTAAGTCTACCATCATATATTAATTAAGTT GTCACCCTTGTCTATAAAGACGCAATGATCTTTTACCAGATCTGGTTACG CCAGCATTTCCTTGACCTTTAACCCCAGAATCCCTCCACATGCAACATTA ACCTTTGAGGTCGAGCTGGAGAACATAGAGTGACCGGGTCAGAGTTCACC CAGGGGTTAAAGTGCACATCACCTAAAGTAGTATAAGCAAGCCTGCTGTC ATGCATGGAGGCAGGGGGCCACCTGAAAGTTTTGTTAAGGAGAGAACTGA TTATATATATGCTCTACACAACTGTGCTTCCACTCAAAATGAAAGGCATT ATAGATGGGTACAACTGATATGGTATGATATGATACGGGGAACAACCTAT GTCATCAAAATGTCGGCAACCGACTTGTGAGCGGTGGTAGGCAGTCCACA ATGTCCTATTCTACCATCCTTAGTAGAGGTCTGTATGTAACCTAAGCTAG CTAAGAGGTGGTAGGGTATCTCTCAGTCAGCATGGGAGTTATTGTCGTAT TGTCAAACGAGGCACGATTGTCTAACTTGATAACTTTCATATGGGGTCTC ACCATTCTACAACTATTCTTCCCTATATCTCGACTTGATTTGAAGACTCA AAAATAACTCAATGGCTTCAGGTGACTCTGAGATACTCTGTCACCTCATA GCCTAGCTTAGGTTGCCCACTGACCTAACTGAAGGCTGCTAGAAGAGGAA ATTCCCGATGACCTACTAGTACCACCACTTGCTGGTTTGCTGATGCCATT TTGATGACGTACATGTAGACTGAATACTGAGGCTCTGAACTATATAACTG GGTTGGGCTGGTAAGATGTACAGCATGGTTATCACAGACTGATATGCAAA GTATTTTGTTTATTTGTTTGTTTCTTGTTGCTGTGATGCATGTCATTTAA TGACGAAAAACCCCAGGGTAATATTTACTATCTGCTTTACCAGCAAATAC CTTTGTCTAAAGAAATTGTATTCAAAGCGTTCTCTACAAGTTACTACTTT AGTTCATGTCTTAAGTACAGGTATAGTTAAGACTTGCCACAACTTGTATC TTGAGTTATCGGCTGACCAACAAAGTCACAAAAGCAGAATGTTAACTTTC TAAGACCGGTGAGTCAAGTCATTGCTGTGCACATTGCCAAGACATGACCA AAGTTACAGCCATCTAGACATGCCTTTGATGGCGACTTACAGACGAGGCG ATTTCTGGCTGTGTAGGTTAGGTGAGAGAGAAATCTTTAATGTTTATTTT TGTGGCAATATTGTGTTTAGTGCTCACATTGGCTTTCATTGTGCGATTTC CCAAGGAAGCTTGCCAAAATTTGATTTTAGTCTCCCTTAGAAATCATTGA AGTTAACAAGTTTGTAGAGTATATTGAAGCCTTGCTTTTCCTGTCAATAT TGGGGCTTTTTTCTTCTTTTTTTCTTACATTTTAATCATGGCTGTCAAAA AGCATTCCAAGATTTGATTTTATTTCACGTTAGAAAGCACTAGATAAGAA AGCTTTGCGAACATAGTGAAATGTTACCTGATATACAACAAGATTTTGGC CACACTTTATGTGTTGATTTTTAGCGACTTCTTTTTAAGGTGTATTTGAA AGCCAGTCTTATGACATGTGACTTATGATGGACATAAGTACTGAAACAGG CAGCTATTGATGAGACAAGTTGTGAGAATGACATGTTGTCTAGTGCTGTT GTGAAGGTATATACTATATAGGTTAGCATTTTTTTGTATATCAGATGCCA CAGGTCTTTGCCAGACAACGGTAGATAGGAAACCCGTCATCTGTTCAAAA ATAAATAAGTTCCTAAAAGGTGGCATATGTCCTCCTTTGTCTTTTATTGA TGTTCACAATAATTGCTTCAAGCACACTTTGAATAACTAGGGAATCGTTG TTGACTGAGATGATTTTCTCAAACACTTGGTTACTTGATAACGTTAAATC TTTTTAACAGAAAGTTAACATCCTTCCCACACCTTGCTGTGTACAATGTA TAGTGTTGTGCCAATCTCCTTTTCTGTAGCTCTTGGGTCACACAGTTATG CAAGCACTACAGTAGGAGACTAGTCCACTGGTAGGGGTGTGTGTGTTTAA CTCCCCTACTCTTGCTGAGTGCTAAGCAGTTAAAGCAGTATGTATCACTA TAAACATCTTTGGTATGAATGACACAGCTAGGGGTTGAGCCTGCAACCTC CCAAATGTATAGCATGCACTTTTCCCACTGGGCTATTTGGTAAAAAAAAC GTGCTCTAATATTCTAGCAGAATAACCAAAGTCTGTTGCCTTTTCTCTCT CCACAAGTAATACAATTACACTTACAAAACATATGCTTGTATTTATTATG TACATTCATACAGACAGAGAGAAATCATTAATACATTTTTTAAAAAAGCT TCTTCTATGACAAGAATTACCTACTTTTGACATGTTTTCTGCAGTTCATA CTACATCTTTG

Coding sequence (CDS) from alignment at Sc0000086:578734..585444-

>Blg00282.3 ID=Blg00282.3|Name=Blg00282.3|organism=Branchiostoma lanceolatum|type=CDS|length=693bp|location=Sequence derived from alignment at Sc0000086:578734..585444- (Branchiostoma lanceolatum)
ATGGGGGAACCAGACAGGATATGGACCGAGGAGCAGGCACTGTCGGACGA
TGTCGGCAAGAAAGATTTGATCAAATTTCTGCAAGACCATGCTTCCAAGG
AGTTTCTTGCAGATCACAAACTGCTGGGCAGCGCCAAGAACGTCGCTAAG
ACAAGCAAGAAGGAAAACCTTGTGGAAGCCTACACTCAGATGTTCGACAC
CAAGGCATTCAAAGATGCTGCACAGGACAAGGAGTTTGACGACATGGCTG
CAAAGGCTAAAGAACTCAAGATGTCCGAGAAACCTAAAGAAGAAGAGGAG
GAAGCTGCTGCAGAAGCTCCCAAGTACACCAAGCAGACCCTGAAGAAGGG
TGACGGGAAGAACTTCCCCAGTAAGGGGGACCTGGTGTCCTGCTGGTACA
AAGGCATGCTGGAGGACGGGACCGTGTTCGACACCAACATCTCCGATGGT
CAGAACAAAAACTTATCTCTCTTCTTTACCTCCACGAAAATAAAGGTATT
GTTTTTGGTTTCTTTGTTTGTCTTTGAGTGTGGTCAAGTTTGTTTCTGTT
GGCCCGAGAACACAGTTTCTGGGCACTTGTCAGGGATGCACATTATGCCT
TCAGCATCTTTGTTTGTATTCAATATTCATATTTTAATTGATGCGGAAAC
AGGACTTGCTTTGTTCACAGCCTGTCCAAGATCTGGAATGTAG
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Feature NameUnique NameSpeciesType
Blg00282.3Blg00282.3-proteinBranchiostoma lanceolatumpolypeptide
The following exon feature(s) are a part of this mRNA:
Feature NameUnique NameSpeciesType
Blg00282.3-exon-Sc0000086-1570713199:585164..585444Blg00282.3-exon-Sc0000086-1570713199:585164..585444Branchiostoma lanceolatumexon
Blg00282.3-exon-Sc0000086-1570713199:584811..584912Blg00282.3-exon-Sc0000086-1570713199:584811..584912Branchiostoma lanceolatumexon
Blg00282.3-exon-Sc0000086-1570713199:583461..583562Blg00282.3-exon-Sc0000086-1570713199:583461..583562Branchiostoma lanceolatumexon
Blg00282.3-exon-Sc0000086-1570713199:582267..582829Blg00282.3-exon-Sc0000086-1570713199:582267..582829Branchiostoma lanceolatumexon
Blg00282.3-exon-Sc0000086-1570713199:578734..581618Blg00282.3-exon-Sc0000086-1570713199:578734..581618Branchiostoma lanceolatumexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Sc0000086genomeSc0000086:578734..585444 -
Properties
Property NameValue
GeneIDBlg00282