Blg00277.0 (mRNA) - B. lanceolatum

Overview
NameBlg00277.0
Unique NameBlg00277.0
TypemRNA
OrganismBranchiostoma lanceolatum (Amphioxus)



Sequence
The following sequences are available for this feature:

mRNA from alignment at Sc0000086:660383..661619+

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>Blg00277.0 ID=Blg00277.0|Name=Blg00277.0|organism=Branchiostoma lanceolatum|type=mRNA|length=1237bp|location=Sequence derived from alignment at Sc0000086:660383..661619+ (Branchiostoma lanceolatum)
ATGGTAAGTTTTACTGCACTTCCAACACACACACTTTGTACCTTAAATCT GGTATCACCCTTGCACTGACAGTCAACTGTCTTCCCTGTACTTCCAGGTT CGTCTGCAGACACAGTCGGCGTCGCATCGCCTGTACAGAGGCACCTTCCA CTGCTTCGCTGAGATTATCAGAAAGGAGTCGGTGAGTTTTGACATTATAG CCGTGTTATGTAATAAAAAACAAATCAAAGTACATGTATATGTTTAAGTC CTTTCGTTGGTATGATGACAAAATTGTAATGCAAGTCAGTTATAGAATAA CTTATAACTGTACAGGATAGGAATTCTACATGGTTTAGCTATTTCCAGGC AAGATGAAACAATGGGGAAATACCGATCAAGTTTTGATTAGATGATTCAT TGAATGTGTTGTTGAGTTCTGGCCAAAAGGACATCTTATTCTTACATGTG CCAAGGTTACAAAAAGCTAATTTTTTTCTGTCATGGTTTGCAGACGTTCG GCTTGTACAAGGGCATGACCTCACCTCTCATAGGTCTGACCTTCATCAAC GCCATCGTGTTTGGGGTGCAGGGTAACGTGATGCGTGTGATCGGCGAAGG AAGCGTACTGAACAGTTTTCTGGCGGGCAGTGCGGCGGGAGCTGTCCAGA CTCTTGTATGCGCGCCTATGGAGCTGGCCAAGACCCGCATGCAGCTCATG GGCATGGGGCAGAAAGTCAAAACGAGGAAACAAAAGGATGTGAAAAACTC TCTGGACTGTCTATTGAAGATCTACAGGAAGGAAGGGCTGAGAGGTTGCT GTAGAGGAATGTACCTTACCCTGTGGAGGGAAACTCCTGCTTTTGGGGTA TACTTTGCCACATATGACATTATCTGCCAAGTGCTGTCTCCGAAGGACCC CAATGAACACATCGGGATGCTTCCACTCATGTTCGCGGGGGGGATGAGCG GGATCGCCTCGTGGATGTCCACGTATCCCATTGACGTCATTAAGTCTCGC ATCCAGGCGGACGGTGCGGGGGGCAAGAACATGTACAAGGGTACGTTGGA CTGCTTTGTTCGCAGCTACCAGGCGGAGGGCTGGACGGTTTACACGAGAG GACTGAACTCGACGCTGATCCGGGCGTTCCCCGTGAACGCCGCCACCTTC ACCGTAGTCACGCTGTTCTTGAGAGAGATGAGGCCGTCGCAGCCCGTGGA CGCCACGCTGTCCAAGCCCCATCTGTACGAGAAGTAA

Coding sequence (CDS) from alignment at Sc0000086:660383..661619+

>Blg00277.0 ID=Blg00277.0|Name=Blg00277.0|organism=Branchiostoma lanceolatum|type=CDS|length=831bp|location=Sequence derived from alignment at Sc0000086:660383..661619+ (Branchiostoma lanceolatum)
ATGGTTCGTCTGCAGACACAGTCGGCGTCGCATCGCCTGTACAGAGGCAC
CTTCCACTGCTTCGCTGAGATTATCAGAAAGGAGTCGACGTTCGGCTTGT
ACAAGGGCATGACCTCACCTCTCATAGGTCTGACCTTCATCAACGCCATC
GTGTTTGGGGTGCAGGGTAACGTGATGCGTGTGATCGGCGAAGGAAGCGT
ACTGAACAGTTTTCTGGCGGGCAGTGCGGCGGGAGCTGTCCAGACTCTTG
TATGCGCGCCTATGGAGCTGGCCAAGACCCGCATGCAGCTCATGGGCATG
GGGCAGAAAGTCAAAACGAGGAAACAAAAGGATGTGAAAAACTCTCTGGA
CTGTCTATTGAAGATCTACAGGAAGGAAGGGCTGAGAGGTTGCTGTAGAG
GAATGTACCTTACCCTGTGGAGGGAAACTCCTGCTTTTGGGGTATACTTT
GCCACATATGACATTATCTGCCAAGTGCTGTCTCCGAAGGACCCCAATGA
ACACATCGGGATGCTTCCACTCATGTTCGCGGGGGGGATGAGCGGGATCG
CCTCGTGGATGTCCACGTATCCCATTGACGTCATTAAGTCTCGCATCCAG
GCGGACGGTGCGGGGGGCAAGAACATGTACAAGGGTACGTTGGACTGCTT
TGTTCGCAGCTACCAGGCGGAGGGCTGGACGGTTTACACGAGAGGACTGA
ACTCGACGCTGATCCGGGCGTTCCCCGTGAACGCCGCCACCTTCACCGTA
GTCACGCTGTTCTTGAGAGAGATGAGGCCGTCGCAGCCCGTGGACGCCAC
GCTGTCCAAGCCCCATCTGTACGAGAAGTAA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Feature NameUnique NameSpeciesType
Blg00277.0Blg00277.0-proteinBranchiostoma lanceolatumpolypeptide
The following exon feature(s) are a part of this mRNA:
Feature NameUnique NameSpeciesType
Blg00277.0-exon-Sc0000086-1570713199:660383..660385Blg00277.0-exon-Sc0000086-1570713199:660383..660385Branchiostoma lanceolatumexon
Blg00277.0-exon-Sc0000086-1570713199:660480..660563Blg00277.0-exon-Sc0000086-1570713199:660480..660563Branchiostoma lanceolatumexon
Blg00277.0-exon-Sc0000086-1570713199:660876..661619Blg00277.0-exon-Sc0000086-1570713199:660876..661619Branchiostoma lanceolatumexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Sc0000086genomeSc0000086:660383..661619 +
Properties
Property NameValue
GeneIDBlg00277