Blg00271.0 (mRNA) - B. lanceolatum

Overview
NameBlg00271.0
Unique NameBlg00271.0
TypemRNA
OrganismBranchiostoma lanceolatum (Amphioxus)



Sequence
The following sequences are available for this feature:

mRNA from alignment at Sc0000086:772453..774916-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>Blg00271.0 ID=Blg00271.0|Name=Blg00271.0|organism=Branchiostoma lanceolatum|type=mRNA|length=2464bp|location=Sequence derived from alignment at Sc0000086:772453..774916- (Branchiostoma lanceolatum)
ATGTCGCAGCTCCGGCGAGGTCTGGAGGGCGTGACGCCCCTCAAAAATCA AGCTGAAACTCTTATGTATTTTTTTTTCAAATAGAGATGTCATGAAACTT AGCTTACTCTTCAGGAAAATCCCCCCTCAGAATTCAGGAAATAGCGTTTC AGAGTGTCAAGATTTCAAAATTTTCGTTGCGCCTTCGGCGCTCGTCATCG TGATCATGAAATTTCCTGCCGCCGCCGAATTTAAAGCGTTCGGAGCAGGC GTGCGAGAATGGCATAGCGTAATAGGTCTCCTGCCACAAGACCAGGGCGA CTAGTGGCAAAAAACCGTCGTCTTCAGGGGTATCTCATGTTCTAAAAATG CTGAATTTACCGTTAACCGTTATCGGCCGGCCTGAATTTACCGTTAAGCG TTATCGGCTGCCCTGAATTTACCGTTAAGCGTTGCCAGGACCCCCCCATG CAGACCCTCCTGTCTGAGCTGTTTACTCACAGTATACAGTCAGTAAATAC TTTGAACTGATATACTAGTAGTAGCTAGCTGATATACTTTTAGTATAGAA ACAGAATTGCACTCACCTATATTTGTTATCACATGTTTTATCAGTGGTTG TTGAGTGACAGGAGAGAAGGCATGAGCCCAATTTGGCCAAGCACACCGAG TCACTCCTACTTTTCTCAATGTTAAGTGTTCTGGTTCTATATGATAGGTT TGACACATGAGTCTGGCCTTCCCATACACAGGACCGAAATGATCACTTCT GACATAACGTGACCTTAATGTTGTACACTATCAGACCCAGATGATTATGA TTGGCAGCCGCCAACAGAGGCTGACCTGAAGGTCATCGAGGCACGTCGTG AACGTAACGATCAGATCAGCAAGCGGATGGGAGACTACCTACTGAAGGGG TGGAAGATGCTGGGTACCAACTGTGAAGATTGTGGGGTGAGTATTCTGAT ACCCTAATGATACATGACACATGTACAGTCATATACAGATACATGTGTAC ACTACAATCAATTGGATCTAGAAGAGGTCACAAATAGTGACATTTCAACT GTGAATGGACAAAAGTTCACGTTGAACTTCTGAAAACAATTGTAGAATGG TGATAAAAGCTCAACATTCCAGCATGACAAGAAAGTCTCAACAAATTCTG ATACTTCAGCCTTCTTTATATTAGGTTTGAATTAGGTAACATCATGTGAC TTGCAGATGCACATGACATCAGGGATTGGTCAGATTTCTTCTTCAAGTAC ACGTAGTTCTTGACTTGTATTTCGGGCAGACCATCACAGATTTAAATGTA TAACTATGTATATATTCACTGTATCTGTTCCCTGTGCAGTGTATTCTGCT GAGGGACAAGCAGGGAGCTGACTACTGTGTGGCCTGTAATGAACTTGAAT CTGATCATGACAAGGATAATCCAGGTGAGGAGGACATGGTGCTGTGTGTG TGTTCTCTAATGTTTAGAGTTAGTTTCACCTTTTTAGACATTTGCACTAT AGGTAACAATTGTATACTTAGCAATATATCAGATATTTTTTGTAATATGG AAAGAGTTGAAAATCTTGTAAAATGATAAATTTTTTTAAACTTCTGCCCA GAGCATGCTTGACAAAATTTTGAATAAGACTATTTCTTAATCTATAATCT ATAATCACAAATCAAAAAGGAAATTTTGAATATGTATCTATGTAGCTGGT CTAACCGCAATTTGGCGTAAGACATCAATCAATATTGTGAAACAAATTTT ATGGAATTCTTGTTGCTGCAGCGGTAAATGAAGAAGCAGCTAGAGGGCTC CATCGAGAGGCCCAGTACGCCACAGCAGCCAAGGACCTGGCTTCCTCATC TGTACAGGAACCTGATATCAACCACGTGGCCTCTCCGCCAAGGAACGTCA CCCAACAGGAAGACACCGTACCAAGGAACAGACTCGCTTCGGCAAATCCG ATAGCCGTCGTGTCCAGTGCACCGCAACAGGTCAGCTCGGCCAGTCAGAG CCATGCGTACTCACAAGCCGGCGAATGGGAAGAGCTGACAGAAGTTGCAG GCATGTCGGTAGAGGCTGTTCAGAAGAAACTGGTTTGGGCAACTGAAGAG TTGGGAAAGACTTCATCAATAGAGAATAGCATTCAACTCTGCACGTTGAT AAAGGCTTGTGCAGAAGCACTGGTAGCATTGAAAAAGATGTAGAAATAGA AGATTAGTACAGAAGCACAATTTTTCATAACAATACCACTCCTTGTTGTA GTCTATAAAGACCAATGTTGATTGTTATCTAACCATGACAATCACACAAT TTCAATCCATACTTGTAGTACCACCTTGTGTTGCTAGGAGGTGCTGCTAC TGCATTATAACACAATGTCATATAGAAGGAGCAATAAACCTAAGCTTGTT ATAAAGTGTTGCATCTGTGCCATTCACATAATTTGTTCGTTTACAGACCA AACCAGTACAGTAA

Coding sequence (CDS) from alignment at Sc0000086:772453..774916-

>Blg00271.0 ID=Blg00271.0|Name=Blg00271.0|organism=Branchiostoma lanceolatum|type=CDS|length=483bp|location=Sequence derived from alignment at Sc0000086:772453..774916- (Branchiostoma lanceolatum)
ATGTCGCAGCTCCGGCGAGACCCAGATGATTATGATTGGCAGCCGCCAAC
AGAGGCTGACCTGAAGGTCATCGAGGCACGTCGTGAACGTAACGATCAGA
TCAGCAAGCGGATGGGAGACTACCTACTGAAGGGGTGGAAGATGCTGGGT
ACCAACTGTGAAGATTGTGGGTGTATTCTGCTGAGGGACAAGCAGGGAGC
TGACTACTGTGTGGCCTGTAATGAACTTGAATCTGATCATGACAAGGATA
ATCCAGCGGTAAATGAAGAAGCAGCTAGAGGGCTCCATCGAGAGGCCCAG
TACGCCACAGCAGCCAAGGACCTGGCTTCCTCATCTGTACAGGAACCTGA
TATCAACCACGTGGCCTCTCCGCCAAGGAACGTCACCCAACAGGAAGACA
CCGTACCAAGGAACAGACTCGCTTCGGCAAATCCGATAGCCGTCGTGTCC
AGTGCACCGCAACAGACCAAACCAGTACAGTAA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Feature NameUnique NameSpeciesType
Blg00271.0Blg00271.0-proteinBranchiostoma lanceolatumpolypeptide
The following exon feature(s) are a part of this mRNA:
Feature NameUnique NameSpeciesType
Blg00271.0-exon-Sc0000086-1570713199:774898..774916Blg00271.0-exon-Sc0000086-1570713199:774898..774916Branchiostoma lanceolatumexon
Blg00271.0-exon-Sc0000086-1570713199:773981..774132Blg00271.0-exon-Sc0000086-1570713199:773981..774132Branchiostoma lanceolatumexon
Blg00271.0-exon-Sc0000086-1570713199:773493..773577Blg00271.0-exon-Sc0000086-1570713199:773493..773577Branchiostoma lanceolatumexon
Blg00271.0-exon-Sc0000086-1570713199:772937..773145Blg00271.0-exon-Sc0000086-1570713199:772937..773145Branchiostoma lanceolatumexon
Blg00271.0-exon-Sc0000086-1570713199:772453..772470Blg00271.0-exon-Sc0000086-1570713199:772453..772470Branchiostoma lanceolatumexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Sc0000086genomeSc0000086:772453..774916 -
Properties
Property NameValue
GeneIDBlg00271