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Sequence
The following sequences are available for this feature:
mRNA from alignment at Sc0000086:599830..606005+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >Blg00270.1 ID=Blg00270.1|Name=Blg00270.1|organism=Branchiostoma lanceolatum|type=mRNA|length=6176bp|location=Sequence derived from alignment at Sc0000086:599830..606005+ (Branchiostoma lanceolatum)
GAACATTACTACAATATTAGTAGGGACACACCCATGACAATTATATTACC
TCAAAGATAAAAGTCCATTGTCTAATTACGTTTTTGTTCCAGGTTGTCAC
GGCATCTGAGAAAGGAAGGTTCATCGTCAGATTCACGCACGTACACAGAT
GACCAAAAGGTAATAGAATGACCTCAACTAATTGTTTACTGTGTTGAGGC
TTATAATAAAGAACATGAATGATTAATGACTCATGTATGAAAGGAGTGTA
CTAGTACTCTATATATGTTACATATCGTATGTCTGGCTGTTAAAAAATAA
TGCTGTTCAAATACAAGATGACACCAAAGGATTAATTGTCCTTTAAACAA
TTTCATTTGTTAACAGTGCAATATGTTAAGGGATCAAAACGCTCACATGT
AATTTGCAGAAAGAATTTGAGAATGCAGAAAAAGGATGAAAAAAGCATGA
AATTTTGCAAGGTAACAAAATACACATTCTAGGTATCATGACTCACGTAT
TGCAAGAAACAAGAAATATTTAGTATGTCAAGACCTGAATGATAAGACCT
AACCTATCTTTTCAGATACATCAAGGGCTAAGAAGTTTGGCAAATGTAAA
GAAACATTTTAAGGATTAGAGCCTTCCAATTCAATAGGCTTTAGATAATA
CCTTTTGTATGTATGTCAAGACTTGACAGGCATGACGTATATGTTGTCAC
ACTGTTAGCTAAGGTCAGTGTGCCGTAATAATGGTTATAGTTAGACCCTT
GGCCTGAAACAGGAGGCTGTAATAAAAGTGTAAAGTGTTTCTTTGTTTGT
ACTTTGTATTTAAGGGAGTCAAATTGATAATTGCATTAGGACAATCGGAT
GTTTGATACACTAATGGCAGTTAGATTTCCAGGTAAACATTATCTACAGA
CAAATTTATCTCTACAAGTACAACTAGATAGTAACTGTATTTCATATAGT
AATCCAGAAGAAGAGTGCAAAAATCAAATTAACTTAAACTAGTTAAAGCC
TGAAACATGGCACAAATGTTGAATGCAGGATCATAAACGATTTCAGGGGT
GGAACCATTACATGGCAACTGTTGCTAGGCAACTTATCTTTCCTATCAAC
CAGTATTAGGATGACAGTGGTTCTGTATTAAGATACTGTATTTTGTCTTT
CAGAGAATCCTTTCCAAAGTGTCGACATGTTTAGACTTGAGAAGTCAGGC
CCTGCAGGCTGCCCATGGTACCAGCCTGGAGGACTCCTTGTCCCTGGAAG
AGCTGAAAAAAGTGGAACCAAGTACGGCTTTCACAAAAACCTCCCGCCAT
GTTCCAAATGCACCATTTGAACAACATTGTATAGCTACATATAGGTCATA
CTACTTATTTGATTGAATTGATGACATCCTCTGAGATCCAGAAACCCGAT
GCAATTGTATTTAAAAAAAGTTGGGGCCGCAAAAAGTTGTCTTCATTATG
AATCTAAATAACTGGTCAGGAATTTTGAACAAATGACTGAACACACAGAA
CATGGCATACCAAAGAATGAATTGTTTCTTATTGTTCTTTCACAGCTTTT
TGATTTTGGAAGATTTTGCTCATTAGTAAATGTTTTCCAATATTTTTTTG
CACATCACGACATATGTTATACAGTAAGGTCGCAAAGTTTTTTAAGGGGC
AAAAATTTATGCATGCACGATTTGATGCAATATTTCAGTCAGTGTGGCCA
TACAGTGCACCAGCTTAAGTCTAGCAAATATAGGCTTAGTTACACCATTT
CAAAGATCGTTTTTCTTCTTTTGAATTTTGAGCTTGCAATGTTTAACTTC
TGTTTTTGTGTGTGCTTCTTTTGTGTTCTTTCTCTCAGTGTTGAAAAATT
TACTGGATGCCAATCCAGAGGAGTTCCCAGTCCAGGTCTCACATTTCTCC
CCAGTCAGGTACGCACTTCATAAAGGCTACAAAGATTGTTATTGTTTATA
TTTGCATTTAATTTGTTTAACTGTTGTTTATGAAAACCTACTTCTGCACA
TATTCCAAATTCGAAAGAGAATGCATATTTATATGGTTGTCAACTATTGT
TGAAATTGCAGGACCTATAGAAATTAACAGTTGTGCCTCTTATGCTAGTA
ATAAAAAACTGTTTTTCTCTTGGATAGAACGTTTGCAAGTGATTCTGATC
ATTTGTGTTTTTTTTTTCTATATCAGACTGACATAAAACTACCATTCTTC
AATACTTGTTCAGTAAAGCACTAATATTTATTACACAGGAGACCAGCAGG
TCCTGAGGTGGACATCAGTGTGTTGAATTTAGATGGGGAGGAGGAGGAGG
AAGAGGAAACAAGAGGTGAACGGACCACACCCACGACGCCCAAGCCAACC
AGTAAGTCTGTCCATACTCACAATATGTATTTGTCACTTACTTTTTGTTA
AAGGTGCTACTGGCCTAAATATACAGTATACTGTATTTTTTGTGATTATC
ATAGTTCACAAAAGACGAGTATCACCTTAAAGAATTACAGATCTGATGTT
TGGCATCTTCTCATTCTAGATATTGGAATGGATGCCCAGATAAGTACAAG
GGCCAATCAGGTTGGCTCTACTAATACCCAGGCTTTGTCATGTATCTTTC
AAACATGTAAATTTCTGTGGGGGCTAATCTCTTTGTTAGCAGCTCATTGT
CATTTGTTTCTACTATAGATACATGTACTTGATAAACATTGATTTCTTCA
CTTTAACCCCAGGTGGGAGCTTACTTCCACGCCTTCCCCCTGAGCCGGGT
ATGACGAACTTGACCCTGAGGATAGAGAGGATAGGACTGAAGGACGCTGG
TCAACACATCGACCCTTACGTCACTGTTAGTGTGAAAGGTATGTATGTAG
CCTCTCTCTTCTACAGTGTATGTTTCTGATACAGCAGTGGAGACTGGGTT
TGTCATGGGTCAGTACAGGTTATAGTAGGTGCAGGTAGATATGAAAATAC
CTGCACAGGTGCAACCTGAAAATGCAGGTGGTATTTCAAGCCCTGCAAAA
GGTAGAATCAAGGGGATAGTACATTACAAATTATGTGAAATTTCGGCGCT
CAGAACGATACATTCAGAAACAACGCTAACGTTGGTTTCAACCTCGCACT
GATTACACTTTATGTTGAGTGGTATGGTTAAGAGTAACATAACATTAAAA
TAGCTGGTTATGCCTCACAGAAAAAATCTCGCAGTCTCACAAATAAGAGC
ATGCAATACTGATGTATCATAGTGGTCTTGACAGAAACTAGGAATTGTAT
GACTTCACACGTGACATTTCTTTTTGATATTTTTGTTTAAGCCAAATTGG
TGTCTTCAGTATTTGACTCTTTTCCTCTAACAGTATTTACATCTAACCTA
GCTTACACGGTTAAGTCACTGACACTTAGGATAGAACTTTCTTGTTACCA
AGTAAGTAAAGTATGGTTGGTAAATGTTGAATTGTGTCCTCCTGTCAACT
CCTACACAGATGTCAGCGGCATTGACTTGACAGAGCCACAGGACACACCC
ATAGCCAGTAAGAAAGAGGACCCCTATGTGTACTTCAACGTGGACGTAGA
AATACAGAGACATGTAGAGAAGATGCCCAAAGGTGAGATACAATACGGGA
AAATCACTGGGTTACAGTTAGGGGAGGGGGGATATGTTCTGTTTTTCATG
TATGACCTTTTGGTGTATGATAACTTTGATGGTCATATAGTTAACTACAA
TTTATTTGTGTATGTGTTTGGTATTGAAGTTTTAAGTTGCCTTTGATACA
TATTTTAGTTCTTGTATTTCAGCTCAACTGCCCTGTCCCCAAAGTGGAAG
GCATCCTTTTGCTCTGTATTTCAATATTCATTGCTGCTGGAAGTAGACTG
TTTCCAGAGTACTCTATTTCATCGTCCTACATCGGGTTATGAACAGCACA
CACAAAAAATTAGACTCATAATCACTTGGCTGTATTGGAATAGATTTACA
GATAAACATGATATAGTTAAAGGTATTACTTATGATGGAAAAACTAATAC
ACTTGTACATGTACATTATGAATTTGAAGTTTACACAGAGTCTTGTCTCC
TGTCTTCTCTTAAAGTTAAGCATCCATAGCTTGACAATTTCTTTCTTTCA
CAGGAACAGCAATATTTTTCGAGTTCAAACACTACAAGCCCAAGAAGAGA
ATGACCAGCATCAAGTGTTGGGCCTTTATGGAGATGGATGAGCTCAAGTC
AGGTCCGGCCTCCATCGAACTGTGAGTTATCTGTTGTTTCAGATTTCAAA
CAGTTACTGTACCTTTTAACTTTCCCCCTGTTGAGGATTGCTTTTTGATA
CAAAATTTGTTTGGCTACGAGTTAGTCATCAGTAGGAAGGTTAAACTTTT
TAACCTTCAACTCTCTATGGATGCACCATGTCATAGTTGTTACTCTTGAA
GCTAAACTGACAAAGGTTACAATCAAGAACAAGCCAACTGAATGCTACTG
TGCTTTTCCTAAAGGTGCTTATTATGCTTTAGCAACAACTACTGCGTATC
ATAAGATCATGATTGGGATCTTCAATGTTACTTAGACTTCTACACTAAGT
AGTGTGTGTTGTGTCCTCATAGTACTGTAACTTAAAAGTATGAGAGTACT
TTGTTTTGCAGTAGGAGGGAAAAGTAGGTGTTTAACATTTGTGGTGGGCA
CACAGCATGTTACTGATAGAAAATCTGAATAGCTTAATGTGGTGTTATGA
TGTTGCAGTAAGGTCACAGTAACTGCAAATCAATACCGTAACCACTGTAT
TTCGAAATTTACAGTAACTCCAACAGATGACATAAATGAGGGAATTTTTG
CTCTTCTTCCAATCTTACAGCTACAAGAAGCCGACAGATTTCAAGAGGAA
GAAAGTGAACCTCCTTACGGTCAAGCCTCTCTTTCTGGAGCTCTACCTTA
CTCTGACCAAGGACTAACGGCAGTACAATGTTTGCAGACTTGGGAGAAAG
GCAGACAGTAACACATTGAAAGGCACCTTGCAGTGACTTTGTTCTTATGG
CTGTGTTTATCGTGTAGTTTTTATTGGTCTTCATATGTATAGTGTAACAT
TAATGCAACTCTGATATTTAGATACAGCCAAGGATAGTTTTGTTGCCAAA
TGTGTATGATTGAGCCAAGTCATTCGCACTTGCAGTGGAATTTATATATG
GAATCACCACAATCATTATTTTGTATCACCGTATTCTTGATATTGCTTTC
ACGATGGTGACTCTAGCGAGTATCTCACAGGACTGCGCCAAGTTCCGAAA
TGCTTTTGCAAAGTGGCGCCATTTGGGAAAATTGGTGAAAATCTTGCCGC
AATGATTTGGCACAATTAAGGCGCAGTTTAGTGAGATACCTGCTTCAATG
TGCCTAACATGGGCACAAGATGAAATAGTTACTTGTTTGTTCTTATTACA
TGGAGGTTTGTGTACAGCAAGAGTACTGTTGACACCAATTTGATTAGTTG
GTTCTCAGGTTTTATCTTAAAAGAAAAGAAGGCCTTAAATGTACAATAGT
GAGGGTCTGAACTTATACTGAGATTTTCCAGCTGTTTTTACAGAAACTGA
TGTGAAATTGTTGGTAAAAATCATTTGAGGATTTCAAATATACTCTACTT
GTAGCAAGAAACACATAAAGCTCTTAGAAAAATGGACTATAGTGAACCTA
TTTTCAAAATTATGATACTTGGATATGGTTTGCAAGAAACAACCAATTGA
ATTGGTGGCCTTATGGAAGTGTCATCAGATTAGCAAAGTTTGCTATCACA
TGATGTTACAGTGACTAGTTGTTCTGGCCAGTAGTTTAACTCTCAGTGTC
AGGGAGGCTTGAAAGTAGGCATTATGATTGGACCATGACACATAAAGGGT
TAACTATGTGTAATATCTCTTTGTAACATTCCTATATTGTAGTGCATGTA
GATTAACTGATATGCCTATCTGAACTAAATCATGCCTGTGAACACTAGAG
TTTTAAGTTAAGAGTAGTTTCACTGTTGTATGTGTTGAAATTTTGCAAGT
ACTAAAGAAAGCTCTTTGAATGTTTTAGGTTGAGCAAGAATGTGCCTGGT
ATTGTATATCATTCAGCCAAAGCAATGTGTGGAGACTTTATATATATTTC
TCAATCTGGAAATGCTGGCAAATACACAATGAGTAATATGAGACTTAATA
AAAGATGACATTTTAGATCACTAAAA Coding sequence (CDS) from alignment at Sc0000086:599830..606005+ >Blg00270.1 ID=Blg00270.1|Name=Blg00270.1|organism=Branchiostoma lanceolatum|type=CDS|length=648bp|location=Sequence derived from alignment at Sc0000086:599830..606005+ (Branchiostoma lanceolatum)
ATGTTGAAAAATTTACTGGATGCCAATCCAGAGGAGTTCCCAGTCCAGGT
CTCACATTTCTCCCCAGTCAGGAGACCAGCAGGTCCTGAGGTGGACATCA
GTGTGTTGAATTTAGATGGGGAGGAGGAGGAGGAAGAGGAAACAAGAGGT
GAACGGACCACACCCACGACGCCCAAGCCAACCAGTGGGAGCTTACTTCC
ACGCCTTCCCCCTGAGCCGGGTATGACGAACTTGACCCTGAGGATAGAGA
GGATAGGACTGAAGGACGCTGGTCAACACATCGACCCTTACGTCACTGTT
AGTGTGAAAGATGTCAGCGGCATTGACTTGACAGAGCCACAGGACACACC
CATAGCCAGTAAGAAAGAGGACCCCTATGTGTACTTCAACGTGGACGTAG
AAATACAGAGACATGTAGAGAAGATGCCCAAAGGAACAGCAATATTTTTC
GAGTTCAAACACTACAAGCCCAAGAAGAGAATGACCAGCATCAAGTGTTG
GGCCTTTATGGAGATGGATGAGCTCAAGTCAGGTCCGGCCTCCATCGAAC
TCTACAAGAAGCCGACAGATTTCAAGAGGAAGAAAGTGAACCTCCTTACG
GTCAAGCCTCTCTTTCTGGAGCTCTACCTTACTCTGACCAAGGACTAA
Gene-mRNA-Prot
The following exon feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| Blg00270.1-exon-Sc0000086-1570713199:599830..599988 | Blg00270.1-exon-Sc0000086-1570713199:599830..599988 | Branchiostoma lanceolatum | exon |
| Blg00270.1-exon-Sc0000086-1570713199:600983..601100 | Blg00270.1-exon-Sc0000086-1570713199:600983..601100 | Branchiostoma lanceolatum | exon |
| Blg00270.1-exon-Sc0000086-1570713199:601668..601737 | Blg00270.1-exon-Sc0000086-1570713199:601668..601737 | Branchiostoma lanceolatum | exon |
| Blg00270.1-exon-Sc0000086-1570713199:602068..602180 | Blg00270.1-exon-Sc0000086-1570713199:602068..602180 | Branchiostoma lanceolatum | exon |
| Blg00270.1-exon-Sc0000086-1570713199:602542..602667 | Blg00270.1-exon-Sc0000086-1570713199:602542..602667 | Branchiostoma lanceolatum | exon |
| Blg00270.1-exon-Sc0000086-1570713199:603289..603411 | Blg00270.1-exon-Sc0000086-1570713199:603289..603411 | Branchiostoma lanceolatum | exon |
| Blg00270.1-exon-Sc0000086-1570713199:603933..604050 | Blg00270.1-exon-Sc0000086-1570713199:603933..604050 | Branchiostoma lanceolatum | exon |
| Blg00270.1-exon-Sc0000086-1570713199:604650..606005 | Blg00270.1-exon-Sc0000086-1570713199:604650..606005 | Branchiostoma lanceolatum | exon |
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| Sc0000086 | genome | Sc0000086:599830..606005 + |
Properties
| Property Name | Value |
|---|
| GeneID | Blg00270 |
|
