Blg00270.0 (mRNA) - B. lanceolatum

Overview
NameBlg00270.0
Unique NameBlg00270.0
TypemRNA
OrganismBranchiostoma lanceolatum (Amphioxus)



Sequence
The following sequences are available for this feature:

mRNA from alignment at Sc0000086:598473..606005+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>Blg00270.0 ID=Blg00270.0|Name=Blg00270.0|organism=Branchiostoma lanceolatum|type=mRNA|length=7533bp|location=Sequence derived from alignment at Sc0000086:598473..606005+ (Branchiostoma lanceolatum)
CGATGACAACTAAATTTTACTTATTTCTAACAAACATTTATGTATCCGAT GGATAAATATGCACTACTGTTTAAAAAATTCACCTTTGCTGATAGTGGAC TAGCCCAGCCGTTAACCCGGAAGTGAGGCGTGTTTCCTTCGCCGGGTTAT GGGAGGGCGTTGGTTCCTCCGGCAAGTTCAACAAACGATTTTTTCCTCAC CACCGTCGTTTCCCCCATGAAAAATTTTCCGAAGCTCGCCATCGATTGAA CGGGTATGTCAGAGAAGACCAAGCAAGTGGCCAAATGGCACGGAGCCTTC AAAAAAGCAACGGACTTCGATTCCTGGGGCCAGCTAGTCGAGGCCGTCGA CGAATATCAGATGTCAGTATCTAGAGAGAGAAGTATTTTGTTTTGTTGAT CTAACGTCAGAGATCTCAGTCTAATTCATCGTAATTTGGGAACCTTTTGC CTGTTTCAGAACAAACTACAAATTTTTAGAATTCAGATGATTGAAAAAAG GATTAATCCAATTTTTTAAAATGTGTAAACTCTTTTGTGTGTGTTACCGT TAATCAAGGAGGTTAAAAAAGGACATCCTTTGTATAATTTCTCCCGCTAT GTTATTGTTGTGGGGGGAGGGGGGGATTAGAATTCTCCCTTGCTTGTGCC GATCATTTTCATTTTTTATACCACCCCCAAAATATTCCCGAGTGCCCCAC CCTATATCTATAATTGAATAGAATAGATCAATATTTGATTACAGTCATTA ACTGCATTCCTTAAATCAAATTAGATTGTTTAGAATCGAATTAGTTGTTC ATTTAAAAAAAAGATTCTTTTTGATAAAATGATTTTGTGTAGTTAAACAT CCTGTCAATATTGCAAAAAAATACTTACTGTCCGAAACATCCTGTCAATA GAACTTCCTGTCAAAAGCCATGTCTTAAAATGCTTATTGCAATGATCCTT AAATAGATACCATATACAGGAAATGAGAAAGACAAGACATGAAAGTGCGA ATCCAACTGATTGAAAGTAAATTACATGATCAAAGATGTAAAAAAAATCT ACTACATGTAACGTTTAAGTATTAACAATATCATCTGTCTGGATACCCCC CTCCCCTTCCAATAATTGTACCAAAAGCTGCATGTTGTAATTTTCCCTTG CGTCAAATCCAAGTTAGATATGCTGTTCAGTTTCAACAGTTTTACTTGAT GAATGAAGCAAAGGAAATAAACTTTTTTCTCTTGTGCTTGGCAATTTGGA CTAGACAAGAGCCATCTCTTATTTGATTGATATACTTATTGCAGTATCAT TTGACCTTTTCTCAGGACAAGTGGAATTATCTGCTATGTTCTCTCCCAAT GAAGGGTGAACATTACTACAATATTAGTAGGGACACACCCATGACAATTA TATTACCTCAAAGATAAAAGTCCATTGTCTAATTACGTTTTTGTTCCAGG TTGTCACGGCATCTGAGAAAGGAAGGTTCATCGTCAGATTCACGCACGTA CACAGATGACCAAAAGGTAATAGAATGACCTCAACTAATTGTTTACTGTG TTGAGGCTTATAATAAAGAACATGAATGATTAATGACTCATGTATGAAAG GAGTGTACTAGTACTCTATATATGTTACATATCGTATGTCTGGCTGTTAA AAAATAATGCTGTTCAAATACAAGATGACACCAAAGGATTAATTGTCCTT TAAACAATTTCATTTGTTAACAGTGCAATATGTTAAGGGATCAAAACGCT CACATGTAATTTGCAGAAAGAATTTGAGAATGCAGAAAAAGGATGAAAAA AGCATGAAATTTTGCAAGGTAACAAAATACACATTCTAGGTATCATGACT CACGTATTGCAAGAAACAAGAAATATTTAGTATGTCAAGACCTGAATGAT AAGACCTAACCTATCTTTTCAGATACATCAAGGGCTAAGAAGTTTGGCAA ATGTAAAGAAACATTTTAAGGATTAGAGCCTTCCAATTCAATAGGCTTTA GATAATACCTTTTGTATGTATGTCAAGACTTGACAGGCATGACGTATATG TTGTCACACTGTTAGCTAAGGTCAGTGTGCCGTAATAATGGTTATAGTTA GACCCTTGGCCTGAAACAGGAGGCTGTAATAAAAGTGTAAAGTGTTTCTT TGTTTGTACTTTGTATTTAAGGGAGTCAAATTGATAATTGCATTAGGACA ATCGGATGTTTGATACACTAATGGCAGTTAGATTTCCAGGTAAACATTAT CTACAGACAAATTTATCTCTACAAGTACAACTAGATAGTAACTGTATTTC ATATAGTAATCCAGAAGAAGAGTGCAAAAATCAAATTAACTTAAACTAGT TAAAGCCTGAAACATGGCACAAATGTTGAATGCAGGATCATAAACGATTT CAGGGGTGGAACCATTACATGGCAACTGTTGCTAGGCAACTTATCTTTCC TATCAACCAGTATTAGGATGACAGTGGTTCTGTATTAAGATACTGTATTT TGTCTTTCAGAGAATCCTTTCCAAAGTGTCGACATGTTTAGACTTGAGAA GTCAGGCCCTGCAGGCTGCCCATGGTACCAGCCTGGAGGACTCCTTGTCC CTGGAAGAGCTGAAAAAAGTGGAACCAAGTACGGCTTTCACAAAAACCTC CCGCCATGTTCCAAATGCACCATTTGAACAACATTGTATAGCTACATATA GGTCATACTACTTATTTGATTGAATTGATGACATCCTCTGAGATCCAGAA ACCCGATGCAATTGTATTTAAAAAAAGTTGGGGCCGCAAAAAGTTGTCTT CATTATGAATCTAAATAACTGGTCAGGAATTTTGAACAAATGACTGAACA CACAGAACATGGCATACCAAAGAATGAATTGTTTCTTATTGTTCTTTCAC AGCTTTTTGATTTTGGAAGATTTTGCTCATTAGTAAATGTTTTCCAATAT TTTTTTGCACATCACGACATATGTTATACAGTAAGGTCGCAAAGTTTTTT AAGGGGCAAAAATTTATGCATGCACGATTTGATGCAATATTTCAGTCAGT GTGGCCATACAGTGCACCAGCTTAAGTCTAGCAAATATAGGCTTAGTTAC ACCATTTCAAAGATCGTTTTTCTTCTTTTGAATTTTGAGCTTGCAATGTT TAACTTCTGTTTTTGTGTGTGCTTCTTTTGTGTTCTTTCTCTCAGTGTTG AAAAATTTACTGGATGCCAATCCAGAGGAGTTCCCAGTCCAGGTCTCACA TTTCTCCCCAGTCAGGTACGCACTTCATAAAGGCTACAAAGATTGTTATT GTTTATATTTGCATTTAATTTGTTTAACTGTTGTTTATGAAAACCTACTT CTGCACATATTCCAAATTCGAAAGAGAATGCATATTTATATGGTTGTCAA CTATTGTTGAAATTGCAGGACCTATAGAAATTAACAGTTGTGCCTCTTAT GCTAGTAATAAAAAACTGTTTTTCTCTTGGATAGAACGTTTGCAAGTGAT TCTGATCATTTGTGTTTTTTTTTTCTATATCAGACTGACATAAAACTACC ATTCTTCAATACTTGTTCAGTAAAGCACTAATATTTATTACACAGGAGAC CAGCAGGTCCTGAGGTGGACATCAGTGTGTTGAATTTAGATGGGGAGGAG GAGGAGGAAGAGGAAACAAGAGGTGAACGGACCACACCCACGACGCCCAA GCCAACCAGTAAGTCTGTCCATACTCACAATATGTATTTGTCACTTACTT TTTGTTAAAGGTGCTACTGGCCTAAATATACAGTATACTGTATTTTTTGT GATTATCATAGTTCACAAAAGACGAGTATCACCTTAAAGAATTACAGATC TGATGTTTGGCATCTTCTCATTCTAGATATTGGAATGGATGCCCAGATAA GTACAAGGGCCAATCAGGTTGGCTCTACTAATACCCAGGCTTTGTCATGT ATCTTTCAAACATGTAAATTTCTGTGGGGGCTAATCTCTTTGTTAGCAGC TCATTGTCATTTGTTTCTACTATAGATACATGTACTTGATAAACATTGAT TTCTTCACTTTAACCCCAGGTGGGAGCTTACTTCCACGCCTTCCCCCTGA GCCGGGTATGACGAACTTGACCCTGAGGATAGAGAGGATAGGACTGAAGG ACGCTGGTCAACACATCGACCCTTACGTCACTGTTAGTGTGAAAGGTATG TATGTAGCCTCTCTCTTCTACAGTGTATGTTTCTGATACAGCAGTGGAGA CTGGGTTTGTCATGGGTCAGTACAGGTTATAGTAGGTGCAGGTAGATATG AAAATACCTGCACAGGTGCAACCTGAAAATGCAGGTGGTATTTCAAGCCC TGCAAAAGGTAGAATCAAGGGGATAGTACATTACAAATTATGTGAAATTT CGGCGCTCAGAACGATACATTCAGAAACAACGCTAACGTTGGTTTCAACC TCGCACTGATTACACTTTATGTTGAGTGGTATGGTTAAGAGTAACATAAC ATTAAAATAGCTGGTTATGCCTCACAGAAAAAATCTCGCAGTCTCACAAA TAAGAGCATGCAATACTGATGTATCATAGTGGTCTTGACAGAAACTAGGA ATTGTATGACTTCACACGTGACATTTCTTTTTGATATTTTTGTTTAAGCC AAATTGGTGTCTTCAGTATTTGACTCTTTTCCTCTAACAGTATTTACATC TAACCTAGCTTACACGGTTAAGTCACTGACACTTAGGATAGAACTTTCTT GTTACCAAGTAAGTAAAGTATGGTTGGTAAATGTTGAATTGTGTCCTCCT GTCAACTCCTACACAGATGTCAGCGGCATTGACTTGACAGAGCCACAGGA CACACCCATAGCCAGTAAGAAAGAGGACCCCTATGTGTACTTCAACGTGG ACGTAGAAATACAGAGACATGTAGAGAAGATGCCCAAAGGTGAGATACAA TACGGGAAAATCACTGGGTTACAGTTAGGGGAGGGGGGATATGTTCTGTT TTTCATGTATGACCTTTTGGTGTATGATAACTTTGATGGTCATATAGTTA ACTACAATTTATTTGTGTATGTGTTTGGTATTGAAGTTTTAAGTTGCCTT TGATACATATTTTAGTTCTTGTATTTCAGCTCAACTGCCCTGTCCCCAAA GTGGAAGGCATCCTTTTGCTCTGTATTTCAATATTCATTGCTGCTGGAAG TAGACTGTTTCCAGAGTACTCTATTTCATCGTCCTACATCGGGTTATGAA CAGCACACACAAAAAATTAGACTCATAATCACTTGGCTGTATTGGAATAG ATTTACAGATAAACATGATATAGTTAAAGGTATTACTTATGATGGAAAAA CTAATACACTTGTACATGTACATTATGAATTTGAAGTTTACACAGAGTCT TGTCTCCTGTCTTCTCTTAAAGTTAAGCATCCATAGCTTGACAATTTCTT TCTTTCACAGGAACAGCAATATTTTTCGAGTTCAAACACTACAAGCCCAA GAAGAGAATGACCAGCATCAAGTGTTGGGCCTTTATGGAGATGGATGAGC TCAAGTCAGGTCCGGCCTCCATCGAACTGTGAGTTATCTGTTGTTTCAGA TTTCAAACAGTTACTGTACCTTTTAACTTTCCCCCTGTTGAGGATTGCTT TTTGATACAAAATTTGTTTGGCTACGAGTTAGTCATCAGTAGGAAGGTTA AACTTTTTAACCTTCAACTCTCTATGGATGCACCATGTCATAGTTGTTAC TCTTGAAGCTAAACTGACAAAGGTTACAATCAAGAACAAGCCAACTGAAT GCTACTGTGCTTTTCCTAAAGGTGCTTATTATGCTTTAGCAACAACTACT GCGTATCATAAGATCATGATTGGGATCTTCAATGTTACTTAGACTTCTAC ACTAAGTAGTGTGTGTTGTGTCCTCATAGTACTGTAACTTAAAAGTATGA GAGTACTTTGTTTTGCAGTAGGAGGGAAAAGTAGGTGTTTAACATTTGTG GTGGGCACACAGCATGTTACTGATAGAAAATCTGAATAGCTTAATGTGGT GTTATGATGTTGCAGTAAGGTCACAGTAACTGCAAATCAATACCGTAACC ACTGTATTTCGAAATTTACAGTAACTCCAACAGATGACATAAATGAGGGA ATTTTTGCTCTTCTTCCAATCTTACAGCTACAAGAAGCCGACAGATTTCA AGAGGAAGAAAGTGAACCTCCTTACGGTCAAGCCTCTCTTTCTGGAGCTC TACCTTACTCTGACCAAGGACTAACGGCAGTACAATGTTTGCAGACTTGG GAGAAAGGCAGACAGTAACACATTGAAAGGCACCTTGCAGTGACTTTGTT CTTATGGCTGTGTTTATCGTGTAGTTTTTATTGGTCTTCATATGTATAGT GTAACATTAATGCAACTCTGATATTTAGATACAGCCAAGGATAGTTTTGT TGCCAAATGTGTATGATTGAGCCAAGTCATTCGCACTTGCAGTGGAATTT ATATATGGAATCACCACAATCATTATTTTGTATCACCGTATTCTTGATAT TGCTTTCACGATGGTGACTCTAGCGAGTATCTCACAGGACTGCGCCAAGT TCCGAAATGCTTTTGCAAAGTGGCGCCATTTGGGAAAATTGGTGAAAATC TTGCCGCAATGATTTGGCACAATTAAGGCGCAGTTTAGTGAGATACCTGC TTCAATGTGCCTAACATGGGCACAAGATGAAATAGTTACTTGTTTGTTCT TATTACATGGAGGTTTGTGTACAGCAAGAGTACTGTTGACACCAATTTGA TTAGTTGGTTCTCAGGTTTTATCTTAAAAGAAAAGAAGGCCTTAAATGTA CAATAGTGAGGGTCTGAACTTATACTGAGATTTTCCAGCTGTTTTTACAG AAACTGATGTGAAATTGTTGGTAAAAATCATTTGAGGATTTCAAATATAC TCTACTTGTAGCAAGAAACACATAAAGCTCTTAGAAAAATGGACTATAGT GAACCTATTTTCAAAATTATGATACTTGGATATGGTTTGCAAGAAACAAC CAATTGAATTGGTGGCCTTATGGAAGTGTCATCAGATTAGCAAAGTTTGC TATCACATGATGTTACAGTGACTAGTTGTTCTGGCCAGTAGTTTAACTCT CAGTGTCAGGGAGGCTTGAAAGTAGGCATTATGATTGGACCATGACACAT AAAGGGTTAACTATGTGTAATATCTCTTTGTAACATTCCTATATTGTAGT GCATGTAGATTAACTGATATGCCTATCTGAACTAAATCATGCCTGTGAAC ACTAGAGTTTTAAGTTAAGAGTAGTTTCACTGTTGTATGTGTTGAAATTT TGCAAGTACTAAAGAAAGCTCTTTGAATGTTTTAGGTTGAGCAAGAATGT GCCTGGTATTGTATATCATTCAGCCAAAGCAATGTGTGGAGACTTTATAT ATATTTCTCAATCTGGAAATGCTGGCAAATACACAATGAGTAATATGAGA CTTAATAAAAGATGACATTTTAGATCACTAAAA

Coding sequence (CDS) from alignment at Sc0000086:598473..606005+

>Blg00270.0 ID=Blg00270.0|Name=Blg00270.0|organism=Branchiostoma lanceolatum|type=CDS|length=939bp|location=Sequence derived from alignment at Sc0000086:598473..606005+ (Branchiostoma lanceolatum)
ATGTCAGAGAAGACCAAGCAAGTGGCCAAATGGCACGGAGCCTTCAAAAA
AGCAACGGACTTCGATTCCTGGGGCCAGCTAGTCGAGGCCGTCGACGAAT
ATCAGATGTTGTCACGGCATCTGAGAAAGGAAGGTTCATCGTCAGATTCA
CGCACGTACACAGATGACCAAAAGAGAATCCTTTCCAAAGTGTCGACATG
TTTAGACTTGAGAAGTCAGGCCCTGCAGGCTGCCCATGGTACCAGCCTGG
AGGACTCCTTGTCCCTGGAAGAGCTGAAAAAAGTGGAACCAATGTTGAAA
AATTTACTGGATGCCAATCCAGAGGAGTTCCCAGTCCAGGTCTCACATTT
CTCCCCAGTCAGGAGACCAGCAGGTCCTGAGGTGGACATCAGTGTGTTGA
ATTTAGATGGGGAGGAGGAGGAGGAAGAGGAAACAAGAGGTGAACGGACC
ACACCCACGACGCCCAAGCCAACCAGTGGGAGCTTACTTCCACGCCTTCC
CCCTGAGCCGGGTATGACGAACTTGACCCTGAGGATAGAGAGGATAGGAC
TGAAGGACGCTGGTCAACACATCGACCCTTACGTCACTGTTAGTGTGAAA
GATGTCAGCGGCATTGACTTGACAGAGCCACAGGACACACCCATAGCCAG
TAAGAAAGAGGACCCCTATGTGTACTTCAACGTGGACGTAGAAATACAGA
GACATGTAGAGAAGATGCCCAAAGGAACAGCAATATTTTTCGAGTTCAAA
CACTACAAGCCCAAGAAGAGAATGACCAGCATCAAGTGTTGGGCCTTTAT
GGAGATGGATGAGCTCAAGTCAGGTCCGGCCTCCATCGAACTCTACAAGA
AGCCGACAGATTTCAAGAGGAAGAAAGTGAACCTCCTTACGGTCAAGCCT
CTCTTTCTGGAGCTCTACCTTACTCTGACCAAGGACTAA
Gene-mRNA-Prot
The following exon feature(s) are a part of this mRNA:
Feature NameUnique NameSpeciesType
Blg00270.0-exon-Sc0000086-1570713199:598473..598834Blg00270.0-exon-Sc0000086-1570713199:598473..598834Branchiostoma lanceolatumexon
Blg00270.0-exon-Sc0000086-1570713199:599922..599988Blg00270.0-exon-Sc0000086-1570713199:599922..599988Branchiostoma lanceolatumexon
Blg00270.0-exon-Sc0000086-1570713199:600983..601100Blg00270.0-exon-Sc0000086-1570713199:600983..601100Branchiostoma lanceolatumexon
Blg00270.0-exon-Sc0000086-1570713199:601668..601737Blg00270.0-exon-Sc0000086-1570713199:601668..601737Branchiostoma lanceolatumexon
Blg00270.0-exon-Sc0000086-1570713199:602068..602180Blg00270.0-exon-Sc0000086-1570713199:602068..602180Branchiostoma lanceolatumexon
Blg00270.0-exon-Sc0000086-1570713199:602542..602667Blg00270.0-exon-Sc0000086-1570713199:602542..602667Branchiostoma lanceolatumexon
Blg00270.0-exon-Sc0000086-1570713199:603289..603411Blg00270.0-exon-Sc0000086-1570713199:603289..603411Branchiostoma lanceolatumexon
Blg00270.0-exon-Sc0000086-1570713199:603933..604050Blg00270.0-exon-Sc0000086-1570713199:603933..604050Branchiostoma lanceolatumexon
Blg00270.0-exon-Sc0000086-1570713199:604650..606005Blg00270.0-exon-Sc0000086-1570713199:604650..606005Branchiostoma lanceolatumexon
The following polypeptide feature(s) derives from this mRNA:
Feature NameUnique NameSpeciesType
Blg00270.0Blg00270.0-proteinBranchiostoma lanceolatumpolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Sc0000086genomeSc0000086:598473..606005 +
Properties
Property NameValue
GeneIDBlg00270