Blg00269.1 (mRNA) - B. lanceolatum

Overview
NameBlg00269.1
Unique NameBlg00269.1
TypemRNA
OrganismBranchiostoma lanceolatum (Amphioxus)



Sequence
The following sequences are available for this feature:

mRNA from alignment at Sc0000086:590258..594468+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>Blg00269.1 ID=Blg00269.1|Name=Blg00269.1|organism=Branchiostoma lanceolatum|type=mRNA|length=4211bp|location=Sequence derived from alignment at Sc0000086:590258..594468+ (Branchiostoma lanceolatum)
GCAACATTTTGTGTTCTAACCGACTTTTGACACTGTGCCATGACTCTGTG CCATGTCGTACCTGGCTGACAGGAATCATGTAAACATTGGACTGTCGGGA CCATAGGTTATTTTGTTCAGCAAGCCACCCCGTTTAGAGATTTTGTGGAC TGTAGAGGGGCCTTGAAATGTATTGGCTTCCAATTGGTTGTCTTTCCGCC ATGACCATGTCGATAGCGAAAAAAATATTCAAAGGACAATCCTCATAGTA GTGCAAAAGTTTATATAGACAATTAACGATTGACATGTTGTTTTGTCGTT TGCCTAGAGAAATGTAGAGAAAACGTTGTGTAGAGAAATGGAAAATTTGA TTGAAAAAAAACAACTTCATAGAGTGCAAACATTTAACAGTGTAGAGAAA TGGAAACGTTGACTGAAAAAAAAGCTTCATAGAGTCCCCTATTAACTTCT GAATGTTATCGCCCAAGGCGTCGGGAGCGAAAACAAAGCAGCACTGCAAC AGTGACGTCACTATTTGCCCAGGTAGTCACATGAGGACGTCTACGAGTAC TGAATCAAACCCGAGATCCAAACGACAGTTGTCGGACGACATTATTTGGT GAGTAGCATTCAGATACATACATACACTGTAACTGCTAAATGTTTGCACG CGTATCTTGGGCTTGGAACTACAGAGACGGTCTATAGAAAACTTGAGCAT CGAAACTTAGTTTTGATTTGTTTTACTTGCAGATCCGATCGCAAATCACA TTTAAAAATGACAGAATATTTCCCGTCTATTGTTTTTCCATCTTTCTTGG TTTATTTTTCGCGTTTCAACAAGATAATAGCTATGATCTTTACTACATAA AAGTCGATTCAGAACATGTCCAGACTAAACTGACGGCGATAGATTACGTT ATGATCTACTACTATAATAGTTAATGATTGTCTTAGTCTACTTTGGCACT TGCGGCACGCCTGCTACCTAGGTCCAACTTCGAAGCCTTTATTAGATTAT ATCAACCTGGCCGTCGTAGGGAACCTGGACAGATGCATATATCATAGTAA TGAAATTAAGTCTAGTACCATGCTTCAGAAAAAAAAAGTTTTACTCTTAT GCCCTTAGGAGTGTTTGCTATCTGTTTGCTAGATCTGAGTGGGGACAGGG TCAAAATTAGAACACCTGCAAACATGGCTGCCGGCGGAATCCCTTCTACA GTTCCCACACCTGGCTTCTTCCACCTTGACCTGCTCATCAAGGACACGAA GGATGTCAAGTCCTGGTATGACGAGCTCAAGGGAAGACTACAGCGGGAAA AGGGGCCGATGGAGAGTGCCATGACAAACCTACTGAGCGTGTTTGCGTTC CACAAAGCACGCGGTAAAGGGGAGGCCCGTAAACTGTTGGAGGAACTCAC TAAAAAGGAGGTCGACAATCTCAACGCTATCGCCAACAGACAGTTCATTT ACGGTCAAATGATGAGAGCAAAGGAGGAGATGGCGTGTAGGGACAGACTG CAGGAACTGCTTTCGGATGAATCTGGTGCTGCCAGAGTAAGAAACGCTCG CTGTTTTGTGGAACAGGCTTATGCTCTTACATTCGATGTAAGGGACGACA GCAAAGACATGGTTACAAGGGTAGGACATGCAATCAGTCTCTTGGAGACA GCCTTAAGCTTAGTGCGCGACAGTGATTTGTTGACCGAAGAAGAGTGTCT TGTTTGGAAATATTACCTCAGCATTTCTTACTGGCGCTTCGATCAGGTTA GGCATCACCGGCAGGATAGAACGCAACTGACGGAAGACGACAGGAAGGCA GGGTTACTTAAAGCACAAAGACTTTTAATAGAGGTAACCAAGATGAAGCC CAGTTGGAAACACGGTAGATTTTATGTCGCACGAGCGTGGGCTCTGCTGG GAGCTCTGGTCAATAAGTGTAAGAACTTCGGATGGTATGAAACCCCCGAC TACGTTAAAGAAGAAACTCCCCAGACAGAAGGGCTGCAGTTCGGTTGCTT CAAAAAGGCGCTGGAAATCAACCCAAATGACAGTGAGATCTATCGGAGAT TTGGAAGGAGCTGCATGCAGCTGAATATGTACAACAAAGCTCGAAAGATG TTGGATAAGTCGATAGACATAATGTCTGACGGTACAAGTAATTGGTTTGC ATATTACAATAGGTCACTAGTTAACATGCTCGAGTATGACCAACTGGTAA AACAGCCACGTAGAGAAGGCCTAGGGGCATTGCCCTCAAAGGAGTTGTTG CAAAGGGCCAAGCAAGACGCAGTTATTTCCTGCGAGGGTATAATGACGCC ATTCAACATCTACCACCTTGGTAAAGTCTGCCACAGGCTTGCCATTCATC CTATAACAAATGAGGTGTTGGACAAGGATGAAATAGGCGATGCACTTGAC AACTTCGCCCTGGCACTGCAGTTAGAGGACGGTTTTGCTAATCCCAAAAT ACATGGAGCCAGGGGCCGGAGTCTAGAGGCTGCAGGAGAACACGAAAAGG CGGCAGAGTCTTATAAACGTGCGGTTGAAAACGACAAATCTAACGTTACC TTCACTGGAAACCTTGCCGGCGTACTGAGAAACCTACTGAAACTTTATGG ATCCGAAGACCGTCACAGAGAGCATTACATCGCCGAACTAGCTTTCTGGA TCAACGAAGGCTACAAGAGGTACCCGGACATCACACAAGCTCTTCAAGGT TGCGTCTTCACGTTCGGAAATCAGATGATACAGGCGTGTCAGCATCTCAT TGACCACGACAAATTCGAAGTTGCAAGGATTTGTCTCGAATGCTTTCAAA GGCACAACAGCTTCGAATACCGCAGAACGGCAGCGTCTATGGCAGGAAAG CTTCCGCTTGTGTTTGATGATAGAGCATCTGGACCTTATGACTCTGCACA GTCCAAGTCAGAAGTACGTGTGAGCCTCCCAGTGGCAGTAGAGAAACCCC GACATGGCCAAGAGTTCCAGTACGACTTCTTCGTGTCACACAGCAGCAAA GACGCCGACTGGGTGAACTATGTACTACTACGAGCGTTGGAGGTGGAATC CCAATTCAAAGGTCTGTAGTCTTCTAAACCGTTCACACTAGGGTATCTTA CCAAAAGATATAAACAATATGGTTCCATTGTGAACTAGCGTTGTAGACTA GGTATACAAGGCTATCATTGACTTCTAGATCACATGATAATCATCATCAG TGTCTAAATTGGAGTAAAACACATAATCCTGTGGGTATATTGCAAAGATT TGCTTGTGCGATTTTCGAGGTAACGGCGTTCAACAGTTTGCTGCAGGAGT ACCAGTTGAATATCCATGTAGTATTTTTTGTGTGCTAAGGAGGCGGACAA GACTAGGACAAAACTAGCATATATGTCCAGATAAAAGTGTCGTCAAGCCA ATAGCTGTTTCAAGGGTGCTATTGACATAAGGCGTTATGACCATTGACTG ATACGAGCGGGCGTGGGAAAAGCTAATAGTTGGGCCTCATAACGCGACAC ATTGATTGTTAGTGCTGATAACCTACAGTGAACTATAGACTGTGATCTAC ACGTATCGACCTCTACAATATTGACTACTGATAGGAAGTCGTTCAGATCT TTGATGATTTGTAAACCATTTTAAAAGAAATGCACAAGCAAACCTTTCCT ACAAGAAAAATTAAGTGCTTAAAAACTACTGTTATGCGGCATAGATTTGA AAGACACTAAAATCGTTGTGTATTACCCAATTGTTCTGTGTGGTGTTGGT TATCATTTGCACAAGCAGCAATAGTATGATATTACAACGCTGTATCTATC TATTTCTGTTATTTTCTAAGGCAAGAATGTGTCGGTAGTGAGGTAACGTT CACATTGTTAACATCGTTGCGATAACTATGCTTTCCAGGTTGCGTAGCTG ACCGAGACTTTCCATTGGGGAAGGACGTGTTGGACAACATCGTCTACAGC ATCAAGAACAGCTACAAGACCCTGCTGATCCTCACACCAAACTTCGTCAC TAGTGAGTGGTGTAAGTACGAGACGAGCCAGGCAGTGGCGGAAAGTTTGG AGAGCAAAAGAGGATGTGTCATTCCCATCATGCTACACAAGTGTGACGTA CCGGATAAAGTGCGCACACTCACGTACCTGGATGTGTCACGTGATGCAAT CGGCTCTAACGATTGGTTGAAACTGAAGAAAGCTTTGGAGGAGAGGCCTC CAACAGATTGA

Coding sequence (CDS) from alignment at Sc0000086:590258..594468+

>Blg00269.1 ID=Blg00269.1|Name=Blg00269.1|organism=Branchiostoma lanceolatum|type=CDS|length=2286bp|location=Sequence derived from alignment at Sc0000086:590258..594468+ (Branchiostoma lanceolatum)
ATGCCCTTAGGAGTGTTTGCTATCTGTTTGCTAGATCTGAGTGGGGACAG
GGTCAAAATTAGAACACCTGCAAACATGGCTGCCGGCGGAATCCCTTCTA
CAGTTCCCACACCTGGCTTCTTCCACCTTGACCTGCTCATCAAGGACACG
AAGGATGTCAAGTCCTGGTATGACGAGCTCAAGGGAAGACTACAGCGGGA
AAAGGGGCCGATGGAGAGTGCCATGACAAACCTACTGAGCGTGTTTGCGT
TCCACAAAGCACGCGGTAAAGGGGAGGCCCGTAAACTGTTGGAGGAACTC
ACTAAAAAGGAGGTCGACAATCTCAACGCTATCGCCAACAGACAGTTCAT
TTACGGTCAAATGATGAGAGCAAAGGAGGAGATGGCGTGTAGGGACAGAC
TGCAGGAACTGCTTTCGGATGAATCTGGTGCTGCCAGAGTAAGAAACGCT
CGCTGTTTTGTGGAACAGGCTTATGCTCTTACATTCGATGTAAGGGACGA
CAGCAAAGACATGGTTACAAGGGTAGGACATGCAATCAGTCTCTTGGAGA
CAGCCTTAAGCTTAGTGCGCGACAGTGATTTGTTGACCGAAGAAGAGTGT
CTTGTTTGGAAATATTACCTCAGCATTTCTTACTGGCGCTTCGATCAGGT
TAGGCATCACCGGCAGGATAGAACGCAACTGACGGAAGACGACAGGAAGG
CAGGGTTACTTAAAGCACAAAGACTTTTAATAGAGGTAACCAAGATGAAG
CCCAGTTGGAAACACGGTAGATTTTATGTCGCACGAGCGTGGGCTCTGCT
GGGAGCTCTGGTCAATAAGTGTAAGAACTTCGGATGGTATGAAACCCCCG
ACTACGTTAAAGAAGAAACTCCCCAGACAGAAGGGCTGCAGTTCGGTTGC
TTCAAAAAGGCGCTGGAAATCAACCCAAATGACAGTGAGATCTATCGGAG
ATTTGGAAGGAGCTGCATGCAGCTGAATATGTACAACAAAGCTCGAAAGA
TGTTGGATAAGTCGATAGACATAATGTCTGACGGTACAAGTAATTGGTTT
GCATATTACAATAGGTCACTAGTTAACATGCTCGAGTATGACCAACTGGT
AAAACAGCCACGTAGAGAAGGCCTAGGGGCATTGCCCTCAAAGGAGTTGT
TGCAAAGGGCCAAGCAAGACGCAGTTATTTCCTGCGAGGGTATAATGACG
CCATTCAACATCTACCACCTTGGTAAAGTCTGCCACAGGCTTGCCATTCA
TCCTATAACAAATGAGGTGTTGGACAAGGATGAAATAGGCGATGCACTTG
ACAACTTCGCCCTGGCACTGCAGTTAGAGGACGGTTTTGCTAATCCCAAA
ATACATGGAGCCAGGGGCCGGAGTCTAGAGGCTGCAGGAGAACACGAAAA
GGCGGCAGAGTCTTATAAACGTGCGGTTGAAAACGACAAATCTAACGTTA
CCTTCACTGGAAACCTTGCCGGCGTACTGAGAAACCTACTGAAACTTTAT
GGATCCGAAGACCGTCACAGAGAGCATTACATCGCCGAACTAGCTTTCTG
GATCAACGAAGGCTACAAGAGGTACCCGGACATCACACAAGCTCTTCAAG
GTTGCGTCTTCACGTTCGGAAATCAGATGATACAGGCGTGTCAGCATCTC
ATTGACCACGACAAATTCGAAGTTGCAAGGATTTGTCTCGAATGCTTTCA
AAGGCACAACAGCTTCGAATACCGCAGAACGGCAGCGTCTATGGCAGGAA
AGCTTCCGCTTGTGTTTGATGATAGAGCATCTGGACCTTATGACTCTGCA
CAGTCCAAGTCAGAAGTACGTGTGAGCCTCCCAGTGGCAGTAGAGAAACC
CCGACATGGCCAAGAGTTCCAGTACGACTTCTTCGTGTCACACAGCAGCA
AAGACGCCGACTGGGTGAACTATGTACTACTACGAGCGTTGGAGGTGGAA
TCCCAATTCAAAGGTTGCGTAGCTGACCGAGACTTTCCATTGGGGAAGGA
CGTGTTGGACAACATCGTCTACAGCATCAAGAACAGCTACAAGACCCTGC
TGATCCTCACACCAAACTTCGTCACTAGTGAGTGGTGTAAGTACGAGACG
AGCCAGGCAGTGGCGGAAAGTTTGGAGAGCAAAAGAGGATGTGTCATTCC
CATCATGCTACACAAGTGTGACGTACCGGATAAAGTGCGCACACTCACGT
ACCTGGATGTGTCACGTGATGCAATCGGCTCTAACGATTGGTTGAAACTG
AAGAAAGCTTTGGAGGAGAGGCCTCCAACAGATTGA
Gene-mRNA-Prot
The following exon feature(s) are a part of this mRNA:
Feature NameUnique NameSpeciesType
Blg00269.1-exon-Sc0000086-1570713199:590258..593318Blg00269.1-exon-Sc0000086-1570713199:590258..593318Branchiostoma lanceolatumexon
Blg00269.1-exon-Sc0000086-1570713199:594146..594468Blg00269.1-exon-Sc0000086-1570713199:594146..594468Branchiostoma lanceolatumexon
The following polypeptide feature(s) derives from this mRNA:
Feature NameUnique NameSpeciesType
Blg00269.1Blg00269.1-proteinBranchiostoma lanceolatumpolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Sc0000086genomeSc0000086:590258..594468 +
Properties
Property NameValue
GeneIDBlg00269