Blg00269.0 (mRNA) - B. lanceolatum

Overview
NameBlg00269.0
Unique NameBlg00269.0
TypemRNA
OrganismBranchiostoma lanceolatum (Amphioxus)



Sequence
The following sequences are available for this feature:

mRNA from alignment at Sc0000086:590258..594468+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>Blg00269.0 ID=Blg00269.0|Name=Blg00269.0|organism=Branchiostoma lanceolatum|type=mRNA|length=4211bp|location=Sequence derived from alignment at Sc0000086:590258..594468+ (Branchiostoma lanceolatum)
GCAACATTTTGTGTTCTAACCGACTTTTGACACTGTGCCATGACTCTGTG CCATGTCGTACCTGGCTGACAGGAATCATGTAAACATTGGACTGTCGGGA CCATAGGTTATTTTGTTCAGCAAGCCACCCCGTTTAGAGATTTTGTGGAC TGTAGAGGGGCCTTGAAATGTATTGGCTTCCAATTGGTTGTCTTTCCGCC ATGACCATGTCGATAGCGAAAAAAATATTCAAAGGACAATCCTCATAGTA GTGCAAAAGTTTATATAGACAATTAACGATTGACATGTTGTTTTGTCGTT TGCCTAGAGAAATGTAGAGAAAACGTTGTGTAGAGAAATGGAAAATTTGA TTGAAAAAAAACAACTTCATAGAGTGCAAACATTTAACAGTGTAGAGAAA TGGAAACGTTGACTGAAAAAAAAGCTTCATAGAGTCCCCTATTAACTTCT GAATGTTATCGCCCAAGGCGTCGGGAGCGAAAACAAAGCAGCACTGCAAC AGTGACGTCACTATTTGCCCAGGTAGTCACATGAGGACGTCTACGAGTAC TGAATCAAACCCGAGATCCAAACGACAGTTGTCGGACGACATTATTTGGT GAGTAGCATTCAGATACATACATACACTGTAACTGCTAAATGTTTGCACG CGTATCTTGGGCTTGGAACTACAGAGACGGTCTATAGAAAACTTGAGCAT CGAAACTTAGTTTTGATTTGTTTTACTTGCAGATCCGATCGCAAATCACA TTTAAAAATGACAGAATATTTCCCGTCTATTGTTTTTCCATCTTTCTTGG TTTATTTTTCGCGTTTCAACAAGATAATAGCTATGATCTTTACTACATAA AAGTCGATTCAGAACATGTCCAGACTAAACTGACGGCGATAGATTACGTT ATGATCTACTACTATAATAGTTAATGATTGTCTTAGTCTACTTTGGCACT TGCGGCACGCCTGCTACCTAGGTCCAACTTCGAAGCCTTTATTAGATTAT ATCAACCTGGCCGTCGTAGGGAACCTGGACAGATGCATATATCATAGTAA TGAAATTAAGTCTAGTACCATGCTTCAGAAAAAAAAAGTTTTACTCTTAT GCCCTTAGGAGTGTTTGCTATCTGTTTGCTAGATCTGAGTGGGGACAGGG TCAAAATTAGAACACCTGCAAACATGGCTGCCGGCGGAATCCCTTCTACA GTTCCCACACCTGGCTTCTTCCACCTTGACCTGCTCATCAAGGACACGAA GGATGTCAAGTCCTGGTATGACGAGCTCAAGGGAAGACTACAGCGGGAAA AGGGGCCGATGGAGAGTGCCATGACAAACCTACTGAGCGTGTTTGCGTTC CACAAAGCACGCGGTAAAGGGGAGGCCCGTAAACTGTTGGAGGAACTCAC TAAAAAGGAGGTCGACAATCTCAACGCTATCGCCAACAGACAGTTCATTT ACGGTCAAATGATGAGAGCAAAGGAGGAGATGGCGTGTAGGGACAGACTG CAGGAACTGCTTTCGGATGAATCTGGTGCTGCCAGAGTAAGAAACGCTCG CTGTTTTGTGGAACAGGCTTATGCTCTTACATTCGATGTAAGGGACGACA GCAAAGACATGGTTACAAGGGTAGGACATGCAATCAGTCTCTTGGAGACA GCCTTAAGCTTAGTGCGCGACAGTGATTTGTTGACCGAAGAAGAGTGTCT TGTTTGGAAATATTACCTCAGCATTTCTTACTGGCGCTTCGATCAGGTTA GGCATCACCGGCAGGATAGAACGCAACTGACGGAAGACGACAGGAAGGCA GGGTTACTTAAAGCACAAAGACTTTTAATAGAGGTAACCAAGATGAAGCC CAGTTGGAAACACGGTAGATTTTATGTCGCACGAGCGTGGGCTCTGCTGG GAGCTCTGGTCAATAAGTGTAAGAACTTCGGATGGTATGAAACCCCCGAC TACGTTAAAGAAGAAACTCCCCAGACAGAAGGGCTGCAGTTCGGTTGCTT CAAAAAGGCGCTGGAAATCAACCCAAATGACAGTGAGATCTATCGGAGAT TTGGAAGGAGCTGCATGCAGCTGAATATGTACAACAAAGCTCGAAAGATG TTGGATAAGTCGATAGACATAATGTCTGACGGTACAAGTAATTGGTTTGC ATATTACAATAGGTCACTAGTTAACATGCTCGAGTATGACCAACTGGTAA AACAGCCACGTAGAGAAGGCCTAGGGGCATTGCCCTCAAAGGAGTTGTTG CAAAGGGCCAAGCAAGACGCAGTTATTTCCTGCGAGGGTATAATGACGCC ATTCAACATCTACCACCTTGGTAAAGTCTGCCACAGGCTTGCCATTCATC CTATAACAAATGAGGTGTTGGACAAGGATGAAATAGGCGATGCACTTGAC AACTTCGCCCTGGCACTGCAGTTAGAGGACGGTTTTGCTAATCCCAAAAT ACATGGAGCCAGGGGCCGGAGTCTAGAGGCTGCAGGAGAACACGAAAAGG CGGCAGAGTCTTATAAACGTGCGGTTGAAAACGACAAATCTAACGTTACC TTCACTGGAAACCTTGCCGGCGTACTGAGAAACCTACTGAAACTTTATGG ATCCGAAGACCGTCACAGAGAGCATTACATCGCCGAACTAGCTTTCTGGA TCAACGAAGGCTACAAGAGGTACCCGGACATCACACAAGCTCTTCAAGGT TGCGTCTTCACGTTCGGAAATCAGATGATACAGGCGTGTCAGCATCTCAT TGACCACGACAAATTCGAAGTTGCAAGGATTTGTCTCGAATGCTTTCAAA GGCACAACAGCTTCGAATACCGCAGAACGGCAGCGTCTATGGCAGGAAAG CTTCCGCTTGTGTTTGATGATAGAGCATCTGGACCTTATGACTCTGCACA GTCCAAGTCAGAAGTACGTGTGAGCCTCCCAGTGGCAGTAGAGAAACCCC GACATGGCCAAGAGTTCCAGTACGACTTCTTCGTGTCACACAGCAGCAAA GACGCCGACTGGGTGAACTATGTACTACTACGAGCGTTGGAGGTGGAATC CCAATTCAAAGGTCTGTAGTCTTCTAAACCGTTCACACTAGGGTATCTTA CCAAAAGATATAAACAATATGGTTCCATTGTGAACTAGCGTTGTAGACTA GGTATACAAGGCTATCATTGACTTCTAGATCACATGATAATCATCATCAG TGTCTAAATTGGAGTAAAACACATAATCCTGTGGGTATATTGCAAAGATT TGCTTGTGCGATTTTCGAGGTAACGGCGTTCAACAGTTTGCTGCAGGAGT ACCAGTTGAATATCCATGTAGTATTTTTTGTGTGCTAAGGAGGCGGACAA GACTAGGACAAAACTAGCATATATGTCCAGATAAAAGTGTCGTCAAGCCA ATAGCTGTTTCAAGGGTGCTATTGACATAAGGCGTTATGACCATTGACTG ATACGAGCGGGCGTGGGAAAAGCTAATAGTTGGGCCTCATAACGCGACAC ATTGATTGTTAGTGCTGATAACCTACAGTGAACTATAGACTGTGATCTAC ACGTATCGACCTCTACAATATTGACTACTGATAGGAAGTCGTTCAGATCT TTGATGATTTGTAAACCATTTTAAAAGAAATGCACAAGCAAACCTTTCCT ACAAGAAAAATTAAGTGCTTAAAAACTACTGTTATGCGGCATAGATTTGA AAGACACTAAAATCGTTGTGTATTACCCAATTGTTCTGTGTGGTGTTGGT TATCATTTGCACAAGCAGCAATAGTATGATATTACAACGCTGTATCTATC TATTTCTGTTATTTTCTAAGGCAAGAATGTGTCGGTAGTGAGGTAACGTT CACATTGTTAACATCGTTGCGATAACTATGCTTTCCAGGTTGCGTAGCTG ACCGAGACTTTCCATTGGGGAAGGACGTGTTGGACAACATCGTCTACAGC ATCAAGAACAGCTACAAGACCCTGCTGATCCTCACACCAAACTTCGTCAC TAGTGAGTGGTGTAAGTACGAGACGAGCCAGGCAGTGGCGGAAAGTTTGG AGAGCAAAAGAGGATGTGTCATTCCCATCATGCTACACAAGTGTGACGTA CCGGATAAAGTGCGCACACTCACGTACCTGGATGTGTCACGTGATGCAAT CGGCTCTAACGATTGGTTGAAACTGAAGAAAGCTTTGGAGGAGAGGCCTC CAACAGATTGA

Coding sequence (CDS) from alignment at Sc0000086:590258..594468+

>Blg00269.0 ID=Blg00269.0|Name=Blg00269.0|organism=Branchiostoma lanceolatum|type=CDS|length=2211bp|location=Sequence derived from alignment at Sc0000086:590258..594468+ (Branchiostoma lanceolatum)
ATGGCTGCCGGCGGAATCCCTTCTACAGTTCCCACACCTGGCTTCTTCCA
CCTTGACCTGCTCATCAAGGACACGAAGGATGTCAAGTCCTGGTATGACG
AGCTCAAGGGAAGACTACAGCGGGAAAAGGGGCCGATGGAGAGTGCCATG
ACAAACCTACTGAGCGTGTTTGCGTTCCACAAAGCACGCGGTAAAGGGGA
GGCCCGTAAACTGTTGGAGGAACTCACTAAAAAGGAGGTCGACAATCTCA
ACGCTATCGCCAACAGACAGTTCATTTACGGTCAAATGATGAGAGCAAAG
GAGGAGATGGCGTGTAGGGACAGACTGCAGGAACTGCTTTCGGATGAATC
TGGTGCTGCCAGAGTAAGAAACGCTCGCTGTTTTGTGGAACAGGCTTATG
CTCTTACATTCGATGTAAGGGACGACAGCAAAGACATGGTTACAAGGGTA
GGACATGCAATCAGTCTCTTGGAGACAGCCTTAAGCTTAGTGCGCGACAG
TGATTTGTTGACCGAAGAAGAGTGTCTTGTTTGGAAATATTACCTCAGCA
TTTCTTACTGGCGCTTCGATCAGGTTAGGCATCACCGGCAGGATAGAACG
CAACTGACGGAAGACGACAGGAAGGCAGGGTTACTTAAAGCACAAAGACT
TTTAATAGAGGTAACCAAGATGAAGCCCAGTTGGAAACACGGTAGATTTT
ATGTCGCACGAGCGTGGGCTCTGCTGGGAGCTCTGGTCAATAAGTGTAAG
AACTTCGGATGGTATGAAACCCCCGACTACGTTAAAGAAGAAACTCCCCA
GACAGAAGGGCTGCAGTTCGGTTGCTTCAAAAAGGCGCTGGAAATCAACC
CAAATGACAGTGAGATCTATCGGAGATTTGGAAGGAGCTGCATGCAGCTG
AATATGTACAACAAAGCTCGAAAGATGTTGGATAAGTCGATAGACATAAT
GTCTGACGGTACAAGTAATTGGTTTGCATATTACAATAGGTCACTAGTTA
ACATGCTCGAGTATGACCAACTGGTAAAACAGCCACGTAGAGAAGGCCTA
GGGGCATTGCCCTCAAAGGAGTTGTTGCAAAGGGCCAAGCAAGACGCAGT
TATTTCCTGCGAGGGTATAATGACGCCATTCAACATCTACCACCTTGGTA
AAGTCTGCCACAGGCTTGCCATTCATCCTATAACAAATGAGGTGTTGGAC
AAGGATGAAATAGGCGATGCACTTGACAACTTCGCCCTGGCACTGCAGTT
AGAGGACGGTTTTGCTAATCCCAAAATACATGGAGCCAGGGGCCGGAGTC
TAGAGGCTGCAGGAGAACACGAAAAGGCGGCAGAGTCTTATAAACGTGCG
GTTGAAAACGACAAATCTAACGTTACCTTCACTGGAAACCTTGCCGGCGT
ACTGAGAAACCTACTGAAACTTTATGGATCCGAAGACCGTCACAGAGAGC
ATTACATCGCCGAACTAGCTTTCTGGATCAACGAAGGCTACAAGAGGTAC
CCGGACATCACACAAGCTCTTCAAGGTTGCGTCTTCACGTTCGGAAATCA
GATGATACAGGCGTGTCAGCATCTCATTGACCACGACAAATTCGAAGTTG
CAAGGATTTGTCTCGAATGCTTTCAAAGGCACAACAGCTTCGAATACCGC
AGAACGGCAGCGTCTATGGCAGGAAAGCTTCCGCTTGTGTTTGATGATAG
AGCATCTGGACCTTATGACTCTGCACAGTCCAAGTCAGAAGTACGTGTGA
GCCTCCCAGTGGCAGTAGAGAAACCCCGACATGGCCAAGAGTTCCAGTAC
GACTTCTTCGTGTCACACAGCAGCAAAGACGCCGACTGGGTGAACTATGT
ACTACTACGAGCGTTGGAGGTGGAATCCCAATTCAAAGGTTGCGTAGCTG
ACCGAGACTTTCCATTGGGGAAGGACGTGTTGGACAACATCGTCTACAGC
ATCAAGAACAGCTACAAGACCCTGCTGATCCTCACACCAAACTTCGTCAC
TAGTGAGTGGTGTAAGTACGAGACGAGCCAGGCAGTGGCGGAAAGTTTGG
AGAGCAAAAGAGGATGTGTCATTCCCATCATGCTACACAAGTGTGACGTA
CCGGATAAAGTGCGCACACTCACGTACCTGGATGTGTCACGTGATGCAAT
CGGCTCTAACGATTGGTTGAAACTGAAGAAAGCTTTGGAGGAGAGGCCTC
CAACAGATTGA
Gene-mRNA-Prot
The following exon feature(s) are a part of this mRNA:
Feature NameUnique NameSpeciesType
Blg00269.0-exon-Sc0000086-1570713199:590258..590855Blg00269.0-exon-Sc0000086-1570713199:590258..590855Branchiostoma lanceolatumexon
Blg00269.0-exon-Sc0000086-1570713199:591366..593318Blg00269.0-exon-Sc0000086-1570713199:591366..593318Branchiostoma lanceolatumexon
Blg00269.0-exon-Sc0000086-1570713199:594146..594468Blg00269.0-exon-Sc0000086-1570713199:594146..594468Branchiostoma lanceolatumexon
The following polypeptide feature(s) derives from this mRNA:
Feature NameUnique NameSpeciesType
Blg00269.0Blg00269.0-proteinBranchiostoma lanceolatumpolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Sc0000086genomeSc0000086:590258..594468 +
Properties
Property NameValue
GeneIDBlg00269