Blg00267.0 (mRNA) - B. lanceolatum

Overview
NameBlg00267.0
Unique NameBlg00267.0
TypemRNA
OrganismBranchiostoma lanceolatum (Amphioxus)



Sequence
The following sequences are available for this feature:

mRNA from alignment at Sc0000086:634945..639952+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>Blg00267.0 ID=Blg00267.0|Name=Blg00267.0|organism=Branchiostoma lanceolatum|type=mRNA|length=5008bp|location=Sequence derived from alignment at Sc0000086:634945..639952+ (Branchiostoma lanceolatum)
CTTTGATCTTCCTGGAAGTTTCCCGCGCTTTTTGTTGACTGGCGCATTCT ATCAGACGAGGATTCTCAGACGCGACGTCAGCAGTCTTATCCCCGACCGG CCGCGGTAAGTCAGGGTTGCCAAAACTATCGTAAGTTTTAATAGGGAACA AAACTATTGAACCAACAGACCTTTGTGTGGTTATGGTATGAAACTAAACC TAAAAAGATATTATAAAACGTTTGTCGGAACTGAGAACTTTAGAAAGGGC CGCCCATCTGTTTCTTGTTACTGAGGGCACGGACGATGTGTCCTACTGTT TCTCCATATGATGTCGTCATTTTTCAGGGAAAATGATCTCCACTTAATGT CTATGAGAAAATGACACTCATAACGTTCGCCTCGTGTGTTTCAGTTTATA CTCAAACACGTAGGGACACTGAGAGTGAGACACGTATGCACACACATGAG CGCATAGAATACCGTCTCATACAGAGATCTATACAAAATGTGATCAAGTT ACCAAATACATATATCTAGGAGAACTCACAGTTATCTTGTGTTTAGAACT GTATAACTGATCAGTGTATGTTCTGTTGTTGTCCAGGATTAAGGTACATG TATGATGGCAGGAACACAGAGATCACAGGCATCATTTGACTTCTGCCACA ATCCACATGCAGGCGTCCTCTTGCAGGGCTTGCATAAACTGCAATCTGAC AACCAACTGGTTGATGTTACCCTTTGCGTCTCCGGTAAGGAGATCCCATG CCACCGAAATGTGCTGGCTGCTTGCAGTGAGTACTTTCATGCAATGTTTT GCAACGGACACCGTGAGAGCAAAGAGTATAAGGTNCGAAACCAGGAAGAG GAAGAAGGAGATGAAAGAGCTGATGGGACTGGTCAGGTTCCCCTTCATGG ACAAGCTGTTCTTCTTGGAGAACGTAGAAAGTAATGACACTGTACGCAAG TCTTGCCAGGATATCGTGACAGAAACTCTGAAGTACCAGCTGTTCGCAGG GGAGGTCCAGTCACCCCGCACCCGTCCACGCCGTGCCAGTGGTCTGAAGG AGGCAGTAGTGGTCATTGGAGGGATAGAGAAAGTAGTGAGAACTGGAGAG AAATTACATCCAGTTTACTCCCACTTCCTCACAATGACAGACTCCATGGA GCCATCAACCTCAAGCTGGATTCATATGACTAGAATAGATAAGAGCACAA ACAACGCTGTTGTTCTTGGAACAAGTGACATAATTGTGTCTTTTGGCAAA GAAGTGTGGCTGTACCAACCAGAACTTAACTCTTGGTCTCAACTCGCTCA TATGAGCATAGAGCGAATTGGTCACAGGTTAGCGGTATTACAAGGTAAAG TATATGCAATTGGTGGCAGAAATGGCACTCTTCTTCTTACATCTGTAGAG GTCTATGACAGAAGACAGAACAAGTGGACTGAAGGTGAACCTCTCCAACA GCCAAGGCACAGCCATGGCGTTGCAGTGTTGGATGGCAGCATATACGTGA TTGGTGGGTATGACAGTGAAGACAAACGAACATCTACAGTGTACCGCTTC AGCCCAGGAGACTCCCAGTGGAAAACACAAAGGAACATGCCTGAAGTAGC TGGGACCCCCACAGCTTCGGTTCTCAATGGTAGCATCTATGTCGCTGCAC CACGCTTCTGCATTTTCTGTTTTAAGCCTGGTGAGGATGGTGGTCTCTGG AGTAAGGTAGCATCAGGTGTTCCACTTTTCTGTGGGATGACTGTCTTTGG TGGGAAGATTTATATCTATGGGGGCATCAATGACAATGGAAACTTGCATG GAAGCACGGCTGTCTTGTGCCTTGATGTAGAAACCCAGTCACTTAACCAT GTTGGTACCATGTCCAAGGCTCTGGTTAAGCATGCCTGTGTCACCATTCT GAAGTGTTGCTAATGTACAATAGACTGTGCAAAGCCAGAACTTGAACAAG TCATATTTTTCAGTCTGAAGGGTCGAAAATTGTACAAAATACAGTTGACA CCATGCTAAATTTTGTCAATACCGTACATTGTACATTTTAGACTTAGAGA GAACAATGTTGGTTATCAATTGGGAACAACAGGACATTAGCCAAAGGAAC TTATCTACATGAGTATAGCTCAGGCTTTTCAAACTTCTCCTTTCATTGAG ATTTATGTACATACACATGGGAATTTCTGAAGTTACATGTACTTAAAAGT AACTTTTAACTTTATTGACAAATCAACTTGGCAGTTTCTCCTAGAGACTG AATTGCACAGATTCACAGTCGTCTTTATAAAACTCCATCATTGTTAAAAT AACACAGAAACCATGTTGATATATCATAATGTTTAACCTTCTCCCTGCTG CCTAATATGTAACCAATAGGGAATTGGGTGTCAATTAACGGCTACGTCAG ACTCGGTGCCAAAGGATGAAAGATCTGTAGGCGAAATTGTATTGTTATTG TATATATACATGTATACATAATCATAGATGTAACTGGAACTTTCAAGAAG CTACAGCTCATCAGTGCAGTGATGCCTGCATAGTGTATTGTCTAGTAAGG ACATTTCCTCTTGTTCTCATTAGAAATTAATGCCATACCTTAGCTTTGTC AACGAAAACTTGAATAGGGTAGTTAGAAGCCCTCCATTCATTCCCATCAC TACATGTAGTTCCACCTTCTTGTATGACCACTTTAACCACTATACTGTTG AAGTGTTCCATGCCTGTGTATGATACAGACTGCAGAAATCATAACAGTTT AAACTGTTGTGACAATTTTTAATATCTCCCTTTACTTTTAATTTAGTTTA TTAATTCATGACTTGTTGATGGCCTTTCATTTCCATGAGTCATTGGATAA CTAGAATCTCATAAAGATGTACTTCTTGTTTGTAAGTTTGTTACTAACAC TCCTTAGTTTATGTCTCTATTCTTATTGTAAAAAATGTGATGGCTTTATG GAGTGCAGGTGAGCTGTGGAAAAAGTGAGGCTACTGTCATACTCTGTATC CAGTAATTGAACATTGTAAGATGATAAAGCCATTTACATTATGGTTGTAA TGTTATCTTGTTGCTGTAGTTTCCAAATACTATTTATAAAAGTAAGACAT GCGGCAGTTGTAATTATGAGTAGTAACAGCCAGATAGCTTCCTAGCGTGA CGCTTAGAATGCCAATGAGAATGACTTTCACATTATATACAATTTACTAA GTCTAGATAAGCTTAATATTATATAGTGCCTGACATGCAGGATATCTTTT GCATTTGTTTGAAGAAAACTTATCATAAAAAAGGGAACAAGTAGGAAGAG AATGAGAGTTCTTATGCTTACTATTGTTGACTAACAGTATATCACTTATG CTTATTTCTTTACATTTTTATGTCATCATGATTTGTGATAAACAAGTTGC TTTTGATGAAAACTTTGTGAGTTTATTTCTCTGTATTTAGTTTAGACAAT GTGTAAAATTACTACTGTAGGCCAACGGTTACAGTAATATTAGCCCCACA CTTGTACAAATAGTTGTTGTTAAAAACCTGAAAAAGATCAGACAGATGAA CCTTCAAGGGGTTTTACAGATTAATGTTGGGTTATGACAAATGAATTGCA ATTTTTGCATGTTTTGAATTTTAGATTCAGCATTTTCACTACAAAAAAGG CAGGCAAAGAAGCAATGTGTCTAATTCAGATATTCTCTAGTATAATATAA GTATGTCATGCAAATATAGAAGGAATTTTCTAAACAGGGAAAGATGATAT AAAGATATTGTTGAATCTTGTTTCATTTTAGAGTCCATCACTTCAGCCAT AAGGTAAACATGACATTCATGATTAGTCAAGGCCCAAAAATAACCAGACA ACAATTAACAGTCACTCAATCAGAGTCTTCTACATGTACTTTGAAATTCT CATTTGCATGTTTATTGCTTCATATAAATATTTGACAGTCACTATTGTTT GTAGTCCAGAATGATGACATTTCAAAGTACAAATGGCACATGCTATTGCA GAACCCTGTCACACTGAATCATTACCACTTATCAAGTAGAGTTGCCAAGA TCTTGTGATACAAGAACACATTCAATACATATGTGTACGTAGAAAATTTA CACATATACAAGAACACATTCAATACATATGTGCACATAGAAAATTTTTT ATATCACAATAGAGCATGGATAGTACCCTGTATCATTGTTCAGCATCATG GTGTCTGAATTTCTGTATCATAAGTTGCTACATGGTAGCCTTGATCACTT TCAAGTACATGTACCTACATGTACAAACAGTATCACAAATTGTTAGAATT CAATTAAAAAAGATATACTAGTGTTCACATGAACTTTTAGTCAAAATTGT GCAAGTGAAACTAGTTGTACATTCAATCAAAACGTCTTAAACTGCCAGAG GATGTCATAAAATTAATACAACTCTCATTTGGCCAGTGATATCGTGAAAG TAATGTTCAGGGTATGACAAGGCCGACATACCATATTATTTGGTAGGTGT TGAAGCATTCAACTCAAATATGCATTTTTATTTTAGAATAAGTGACAGTA ATAATCGATGCCTTGTACAGATTTATACATGTTGATATCAGCATCCATAT GTATAACATTGCAGTGACAAGATTTCAGCCAACATCAACTCTAGAGCTCT TAATTCTACCAGGTGCCCTAACACTTCCACATGAAAAAACAGTGTTATTG AGGCCTTCTGAAGAATGTCTTGAATACCTGGATATCTTAAGTGTACATAC TCCAGGAGTACTGATGCTGCAGTAGATCTCTTTGAAATCACCGCCTTTTT AAATGTATGCAGCGGAATTATGAAATATGACATCGCATGTATTGCAGACT TATCAAACCTAACATTAGATTAACTCAGATTAATGCATGCTTATTCGGAC ATGCATTTTAAGATTATATTTTACAGTCAAGAACTCAACATACCATGCAC ATGTACCTCACACAGGTTCATGCATTGCTTTCAGGGGGAGTGGAGGCTTT CCATCTGT

Coding sequence (CDS) from alignment at Sc0000086:634945..639952+

>Blg00267.0 ID=Blg00267.0|Name=Blg00267.0|organism=Branchiostoma lanceolatum|type=CDS|length=1257bp|location=Sequence derived from alignment at Sc0000086:634945..639952+ (Branchiostoma lanceolatum)
ATGCAGGCGTCCTCTTGCAGGGCTTGCATAAACTGCAATCTGACAACCAA
CTGGTTGATGTTACCCTTTGCGTCTCCGGTAAGGAGATCCCATGCCACCG
AAATGTGCTGGCTGCTTGCAGTGAGTACTTTCATGCAATGTTTTGCAACG
GACACCGTGAGAGCAAAGAGTATAAGGTNCGAAACCAGGAAGAGGAAGAA
GGAGATGAAAGAGCTGATGGGACTGGTCAGGTTCCCCTTCATGGACAAGC
TGTTCTTCTTGGAGAACGTAGAAAGTAATGACACTGTACGCAAGTCTTGC
CAGGATATCGTGACAGAAACTCTGAAGTACCAGCTGTTCGCAGGGGAGGT
CCAGTCACCCCGCACCCGTCCACGCCGTGCCAGTGGTCTGAAGGAGGCAG
TAGTGGTCATTGGAGGGATAGAGAAAGTAGTGAGAACTGGAGAGAAATTA
CATCCAGTTTACTCCCACTTCCTCACAATGACAGACTCCATGGAGCCATC
AACCTCAAGCTGGATTCATATGACTAGAATAGATAAGAGCACAAACAACG
CTGTTGTTCTTGGAACAAGTGACATAATTGTGTCTTTTGGCAAAGAAGTG
TGGCTGTACCAACCAGAACTTAACTCTTGGTCTCAACTCGCTCATATGAG
CATAGAGCGAATTGGTCACAGGTTAGCGGTATTACAAGGTAAAGTATATG
CAATTGGTGGCAGAAATGGCACTCTTCTTCTTACATCTGTAGAGGTCTAT
GACAGAAGACAGAACAAGTGGACTGAAGGTGAACCTCTCCAACAGCCAAG
GCACAGCCATGGCGTTGCAGTGTTGGATGGCAGCATATACGTGATTGGTG
GGTATGACAGTGAAGACAAACGAACATCTACAGTGTACCGCTTCAGCCCA
GGAGACTCCCAGTGGAAAACACAAAGGAACATGCCTGAAGTAGCTGGGAC
CCCCACAGCTTCGGTTCTCAATGGTAGCATCTATGTCGCTGCACCACGCT
TCTGCATTTTCTGTTTTAAGCCTGGTGAGGATGGTGGTCTCTGGAGTAAG
GTAGCATCAGGTGTTCCACTTTTCTGTGGGATGACTGTCTTTGGTGGGAA
GATTTATATCTATGGGGGCATCAATGACAATGGAAACTTGCATGGAAGCA
CGGCTGTCTTGTGCCTTGATGTAGAAACCCAGTCACTTAACCATGTTGGT
ACCATGTCCAAGGCTCTGGTTAAGCATGCCTGTGTCACCATTCTGAAGTG
TTGCTAA
Gene-mRNA-Prot
The following exon feature(s) are a part of this mRNA:
Feature NameUnique NameSpeciesType
Blg00267.0-exon-Sc0000086-1570713199:634945..635049Blg00267.0-exon-Sc0000086-1570713199:634945..635049Branchiostoma lanceolatumexon
Blg00267.0-exon-Sc0000086-1570713199:635531..639013Blg00267.0-exon-Sc0000086-1570713199:635531..639013Branchiostoma lanceolatumexon
Blg00267.0-exon-Sc0000086-1570713199:639062..639952Blg00267.0-exon-Sc0000086-1570713199:639062..639952Branchiostoma lanceolatumexon
The following polypeptide feature(s) derives from this mRNA:
Feature NameUnique NameSpeciesType
Blg00267.0Blg00267.0-proteinBranchiostoma lanceolatumpolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Sc0000086genomeSc0000086:634945..639952 +
Properties
Property NameValue
GeneIDBlg00267