Blg00266.0 (mRNA) - B. lanceolatum

Overview
NameBlg00266.0
Unique NameBlg00266.0
TypemRNA
OrganismBranchiostoma lanceolatum (Amphioxus)



Sequence
The following sequences are available for this feature:

mRNA from alignment at Sc0000086:1429..9196-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>Blg00266.0 ID=Blg00266.0|Name=Blg00266.0|organism=Branchiostoma lanceolatum|type=mRNA|length=7768bp|location=Sequence derived from alignment at Sc0000086:1429..9196- (Branchiostoma lanceolatum)
ATGCAGTCCAGACTTCATGACGGCTTTACGGTACAAAATCTGAAGTTCAG GACTAGAAGAGTCCCAAAAACTTCCTCCATCCCGCTCATCTTACCGAACG ACCTGAAGTACAACTCCTCTAAGGGTAGGGTGGAGAAGGTTGTCGGCGCA CGACAGAGTACCCTGTGCGTGGTACCGGAGGCTCTGGAGCTGTTGGAGGG GATACAGGGCCCCGTCAGCGCGCTGTCGATATGCGGGCCGTGCCGCACGG GGAAAAGCTACGTTCTGTCTAGGTAAGTCAGCGTCTATTTAATTTGGTGA CTTCGTTTTCAAAAAAATCCAATTTAGCACATATCGTGCAATATATGCAC AAGTACTTAAACATGGGTGTATTCTAGATAAAAAGGCATTCTATGGCATC TATGCAAAAAGAACGATGCCCACGCCCCTACCTCGATCACACATGTACAC AGATACTCTTTTTGAAGGGAGTGCAATGCTATCATGATCCGCTAGTGGGC CATCAACATGCACGGAAATCTAGAGTCAGCCGTATTCACAAATATACAAC ATTCTTTTCTATGTGAATGCTACATGCAACACAAAATAATGCTCGATAGT AAAGGATTTTTGTTGTATGTGAACCTGTAGGCTACTGGGCTCGGCGGACG CCTTTGAGCTGGGCCACCGCTGGGACCCGCAGACGTTTGGCATCTGGATG GGTACCAAGGTCCTAAAGGGCGCGGACTTCACTATCCTGCTGCTGGACAC CGAGGGGATAGGTGGGGAATACGTTCATGTTACTGTGTACCAATTTCAAT AGTCTCGTTCACTTGCGGCCCTCTCGCGAGATGATTCATGAAGGCGAGAT TCCAATTAGAGCCAGGAACCGGAAATGCCAATACCAATGTCACTCCCATC TTACATTGCAAGTTTGCTGCTGTCTTATTCAAAAGTAAAATATTTCTAGA GCTTTATAAAAATATGTTGACGCTCACATTACAAATGACGCATCATAGCG ATATTCTTCGTCTTTTTTTGTAACGGTATACATGTACGTTTCGACTTTGT TATAGACGCGTCAGGGGGAAGTGCAGACCAGGACGCCGGTATTTTGGTGT TAACCATCCTGCTGTCCTCTCTTCTCATCTACAACTCACTCAACGTGCCG TACAAGGGGGACCTGGAGAAGATGCAGTGAGTGCAGAACTGACATTAACA TTTAGAATAATTATAACAACCACACACCTGTTGACTGGCCAATCAAATTA CGCTCTCGTAATCAATATTGAACGGGGGTTCTTGATTGGTCAACGCCGTC TGCCTATATGCTAATTACTTTTAAAACTCGCTCTCTGGTGATACAGATCA ATCAATGGAAACTGCAACTACTCTGCTCTTTCGCTTTCTAATTCTAGACT TTCCCATGCATATTTAGAACCTGTTGCCTCGTTGTCTACTTCTCAATTTT ACTTCATTCTACACCAGGTGTTTCATCAAGTTGGCTAAAGGCGTGACTGT GAAGAGAGGACAGAAGACGCAGATGTCGGAACTCCGTGAGTTCTTCCCGG ACTTCCTGTGGCTCCTGCGGGACGTGTCGCTCATGAGCACCGACGAGAAG GGGCGGGAGATCGGCCCAACAGAGTACCTCAAGACTCGGGTAAGACTGTG AAAGTACCCTCAAGAGAAAGACAGCATACAGATGGACAGACAGACGGAAC AAGATTGGCAAGATAAAAAGATGTTGCCATGGCGACGGTGGTCTCTGTTA ACGTTTTCGTTTTTAGCCCACATGCAAATAAGGACGTGGCATAAATCATA TCAGTCGATCACCTTCTCTACCAAAATAACACAAGTTGTCCAATGTATGA AAATCTTGTTTTCACAAAAAAAGATATCGTACCATTTCCTCATAAATTAT GTAAATGAGGCCCTCTATGCAAGATTTGTGTCTAATAGTGGCCACATTTA CTTAACTTCCAAATGGTGCAAAAATGAAATCCCCATCATTTACCACTATG GAATTATAGTATTTTGTCATTAATTATGCAAATTAAGTATCCATTTGCAT AATTGATATCTATCGATATTTATCTCTTTCTCAGTTACATATGTCATGTG TTTGAGAGTCCTATAATAGAATGCAGCTGATTTATTAACTGTCCTCATTA ATTATGCAAATCAGATATTGATTTGCATAATTGGCATATGATTATGTAAA TCATCACTTAAGCTATCTACACACCAAAAATTATGATGATCCGTCATCCC CTTCTTGCGTTATTCTCTTTCAAAGTTTGAGTCAAAATCAGCTCCTGCAG TTCCAAAAAAAGCTGCTAGGGGTACAAATCTACAGGACATATTTTCCTAA CAAAGAGCTATCCACCACTTAAAGATCATGACTATAGAATGTTCAGAAGA CGAGATTTGAAAAGTGAAAGTTCCCCTGCAGTACCATAGAAAGTCGCTAG GGGGCCCAAAATCCAATCATTACAAAGTCTCCCACAGACCTACCCACCTG CAAAACATGAAGATAATACATCCAGGCATTCTTGAGTTATCGTCCCATGG ACTTTCACATTCCTGTACAATTCCTAGAATTCTTGCAATCTGCACACAAT ATAGTAGAAATTTGGCTCGCGCCTGAGGCGTCGCCAAAAACTGACAGATA AACAGACAGAAGACAGATAGACAGATAGACAGACAAGCCAAAAGCAAACC TTTTCTCCCGCTTGGGGTGAGGTACTATGATGAAAGGTTCATGTAATTTG CGGGTAGTTACACTCATATTGTACCTGTAGCATGATGAATTACAAGGACA CATATATCATAGTTGAGACATGCTTATGACATTTTTCATCATATCCTAAA GTTGGAGTTTTACCTTGTCTCCAATTCTCAGGTTCTCGCACGTGGTGAGG GCTTTGAAGAGACACCTGGCGACAAGGTAGGGCGCGCCATCCTCACATCG TTTCCATCCGTTGAGTGCTTCACTCTGGAGCGTCCTTCCGACAATAAAGA CATTATGAACAACATTGCAGACCACACCGACAAGCTGAACCCCGAGTTTA ACAAGGGCGTGGGGACCCTGATTGGACTCCTACTGCAGAAGTCACGTCCC AAGAGGGGATACTACAAGGGGTCGACTGTTAACGGTAAGGGGTTCGACTA AATAACGAAATACAGTCAACGGAAATAGCGGAATACAGCAACATTCGCGC ACTCGCTATATTTCTTGTGTTTTGNGCCTTTGTGTGCTCTAGGTTGGAAT CGCGGCTGTTTCTAAGGATGCAGATGTTCAAATCATACTGGATGAGGATA TTGAAGATGAAAGGTATGATATTCTCTCTCTCTTTCCGTGAGTGTATGTG CGTTTGTACACGTGTTTGTATGTATATATGTGTGTGTGTGTGTGTGTGTG TGTGTCCGCGCGTGTTTGTGTGTGTGTGCGTATGGATGTGCATGTGTGTG TGTGTGTGTGTGCGAGTGTGTGTGTGCATGCGTGCGTGCGTGCGTGTGTA TGTACATGAGTGTGTGTGTGCAAGTGTGTGTGTGTGCGCGCGTGTGTGCG TGTGTATGTGCGTTTGTGTGTTTCTGAAGTATAGACGTAGGTGGAGAGGG AAAGTCTGACATTCAAGTTATTTTTCAACCAGCGAAGGTTTTAGTATAGG GCAATGACTCAATCACTCTTCCTAAGACNTCTTGCAATCTGCACACAATA TAGTAGAAATTTGGCTCGCGCCTGAGGCGTCGCCAAAAACTGACAGATAA ACAGACAGAAGACAGATAGACAGATAGACAGACAAGCCAAAAGCAAACCT TTTCTCCCGCTTGGGGTGAGGTACTATGATGAAAGGTTCATGTAATTTGC GGGTAGTTACACTCATATTGTACCTGTAGCATGATGAATTACAAGGACAC ATATATCATAGTTGAGACATGCTTATGACATTTTTCATCATATCCTAAAG TTGGAGTTTTACCTTGTCTCCAATTCTCAGGTTCTCGCACGTGGTGAGGG CTTTGAAGAGACACCTGGCGACAAGGTAGGGCGCGCCATCCTCACATCGT TTCCATCCGTTGAGTGCTTCACTCTGGAGCGTCCTTCCGACAATAAAGAC ATTATGAACAACATTGCAGACCACACCGACAAGCTGAACCCCGAGTTTAA CAAGGGCGTGGGGACCCTGATTGGACTCCTACTGCAGAAGTCACGTCCCA AGAGGGGATACTACAAGGGGTCGACTGTTAACGGTAAGGGGTTCGACTAA ATAACGAAATACAGTCAACGGAAATAGCGGAATACAGCAACATTCGCGCA CTCGCTATATTTGTTGTGTTTTGCTATTTCCGTTGCATTTCGCTGCTTAG TCTTACCTTGCAGCTAGCGCTTTCAAATGTCATGGGTCCTCACTTCTCTC CATAACCAACCTGTCCCTCTCTTCGCCTTCCCATCCAATGTTTAACTTGA AATACTGACAACCAAGAGTACATGTTTGTTGACGTAAGGCTCACCACGGA TGACTCTTTAGTCATAATATCAGCCAAGTCCGTTTGGAATGATTGTGCTT CAGTGGTGTCTCGACATGGGCTATAAATCATCAAATATCAAATGGTTCGA AAAATGAAGCATCAGGAAACGTCTCATGGCATCCATATATAAATGTATAT ATATCATCAAACCAGATTTTTCTACATCTATACATTTTGTTCCAGGCGTT GCCCTGAGCCTCATGGTGAAGCAGTATGTGGACGCGGTCAACGACCCACA GGCCATCCCCGCACTGGACAACACCTGGAAGAACACCATCCAGCTCATGC GCAGTAGGGCCATCGAGGAAGCTGTCCAGGAGTACAGAGAAGAGATGGCG GTAAGAGATCTTCACAAGTCACGCCTTCCAATCAAGTCGATAACAGAAGT TTAAATTTGTATCTAAATTGACTGATTTGTGGTACGGTATTGCATCTACT ACCCAGTATTAATGTGCACGGATATACTATATAGCTATCAGTACGTTAGT GCCATAGATATACCCTAGTGCCCTTTCTACATCATTTCCAAGCACATTCA ACTGAACTTTTCCTTGATAGACCATCTTTGTACCACTACCCCTAACGCGG ACTGTGAAATAAAGACTTGCCTTTGTGTGCTCTAGGTTGGAATCGCGGCT GTTTCTAAGGATGCAGATGTTCAAATCATACTGGATGAGGATATTGAAGA TGAAAGGTATGATATTCTCTCTCTCTTTCCGTGAGTGTATGTGCGTTTGT ACATGTGTTTGTATGTATATGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT GTCCGCGCGTGTTTGTGTGTGTGTGCGTATGTATGTGCATGTGTGTGTGT GTGTGTGTGCGAGTGTGTGTGTGCATGCGTGCGTGCGTGCGTGTGTATGT ACATGAGTGTGTGTGTGCAAGTGTGTGTGTGTGCGCGCGTGTGTGCGTGT GTATGTGCGTTTGTGTGTTTCTGAAGTATAGACGTAGGTGGAGAGGGAAA GTCTGACATTCAAGTTATTTTTCAACCAGCGAAGGTTTTAGTATAGGGCA ATGACTCAATCACTCTTCCTAAGACTCCCTCTTCCCTGTTCCTTGTTCCA GTGATGAGGCCTTGTCTCTGATGGGCATACACAACAAGGCATTCAACAAA GTCACGGGTTGGCTACTGGATAAGATAGGGCATCTGGGCATCAGTTCTGG TGACCTTGATGAGGAAAGCGAGGCGGTGGTTCGGGAAATGCAGGAACGTC TAGGTACGTGAATTGTACTGTGGAAAATAGTGCCATCGTAGTCGTGTATA GTAACATAACATAACATAACCTTCAAATTTTCTGACTACCTTCATGTTTA GATTAGCTGTTTGCACTTGCATGGTTTTTGTATTTTTATCTCCATGAAAA AAGACTTTTTCATGGGGATATTGTTCTTATGTTTCTACATAACTGTGATT ATGATTAGTAGCATTATTCAATTGTACTTGTATCGGTCGTGCATAGAAAC GTCCTAAGATTCCTGTGGTCAACTCCTCACAGACAGCCTCTGTGAATATT GATAGATTATGTTATCTTATATCGTTACTGTGTCATATCATAGACACCAG TAATAAGTCATGCTATCGTCTGATGTTGGGAAACTGGAGCCTTAAACTGG TTCTTTTCTTTGTTCCTTGTGCAGTTCGCAGGGAAGAGCGCACGATTGAA TACGTGGATGACGACCTTGTGACCAGACGGGAGCAGGGCATGGCGGTGGT CGGTGGAGAACTGTACGGCCTCCTGCAGGAGAACCGCGGCCGGTCCCGCG CCTTCTGCACCGACATATTCAACATGCTCTTCGAGCCGGTCCAGAAGAAG ATCGAGTCTCCGCCCGCCGGGTACGACTTCAGGGGCGCCCTGGATGAGCT GGACAGGACCCGGGAGCAGTACCGCCGGTGGGCGCGAGGGCCCGAGAAGT GGACGGTCCTGCAGGAGATGACCAAGAACTGGGACTCCCTCCGAGCTAAC ATAAAGAAGATCAGAGGATACCAAGAGAAGGTTAGTTAGTCGGGAAGCTA TTATTCAGGTATTGTCTATAATAACTCTTATTATGCTCGGGACCATGTTG GCATTGGGCACGAGGAAATGTAGCTTGGAAAACTGGAGCTGGGCAATCGG CAACTTGGGTGAGTTCAATTTCTGTGTTGGAATTTATAGTTCAACTTTGC TTCTACAGCTGATGTTAGAACAAGAGAGGGCTCACCAAGCCGAGCTGGAA GCCGAGAGGAAGAACCAGGAGGCCAGGCGGCTGTACAGGCAGCAGCTGGA GATGCAGCGGGCTCACAAAGAGACTCTGGAGAAGATGGAGCAACTGCACA AATGGCAGATGGCAAAGGTAGGGCAAGGAAGGAAAAGAAACATAGTGTAT AATAAGAAAAACGGTTGTGTCAAATAAATATTGACTGTCTTTTTCAATTT GTTGTTGTCATTTTCGTGTTAGCACCACGACGCCTGCCTTAGACCATCCT ATAGTCACCATGGTAATGTTGTATCAAGGTTTGTTTTAGAAGATGTCCTA CAAGCCTGCTATGGAAGCTATATCGATTTTTAGTATGGACGCAACACTAC CGATTGATTAAGTCAATGGTTGGGCAGCCTACAGATTCAGCCGGCTGAAT GTTTACATATAATTCCAGGTGAAGATGGAAGGAGAGGTGTGGCGTTGGGG AGAAGAACAGAAGTTCGAGGACTTCAGAAGGGCGCAGATGAACGACATGG CAAATCTAACTAGGGTAAGTATATCTGGGATTCATTTATGTATTGATCAT TAAGTACACAAATGTAAGAAACAAGCTACCGACATGTATACATGACCATT TTCTGAAAATGGATATAAATAAGGAATACAACAAAGGAAGCGGCTAGAAG GCCCAAAGTCGATATTGACCTTTTTCTTCCCGAGAGCTACCAATATCGTA AAAATTAATCCACAGCGTAACGTACGTTCTTGAACACACACACACACACA CACACACACACACACACACACACACACACACACACACACACACACACACA CACACACAGATAGACACATATGGGTGGGCACAAAGAAAACAGTACCTTTG TAGGACGCGTAGCTCCTTCAGGGAGGTAACAATTGTTCTTTCTCTCGAAG GAGTTGCAGGATAGACATGACAGGGAGGTGCAGCAGCTGAAGTCCCGGAT GCAGAGGCAGCAGGATGAAATGAACGGCAAGATCCGGGAACTGAACGACA GGCTCAGGCGGCCACCAC

Coding sequence (CDS) from alignment at Sc0000086:1429..9196-

>Blg00266.0 ID=Blg00266.0|Name=Blg00266.0|organism=Branchiostoma lanceolatum|type=CDS|length=2056bp|location=Sequence derived from alignment at Sc0000086:1429..9196- (Branchiostoma lanceolatum)
ATGCAGTCCAGACTTCATGACGGCTTTACGGTACAAAATCTGAAGTTCAG
GACTAGAAGAGTCCCAAAAACTTCCTCCATCCCGCTCATCTTACCGAACG
ACCTGAAGTACAACTCCTCTAAGGGTAGGGTGGAGAAGGTTGTCGGCGCA
CGACAGAGTACCCTGTGCGTGGTACCGGAGGCTCTGGAGCTGTTGGAGGG
GATACAGGGCCCCGTCAGCGCGCTGTCGATATGCGGGCCGTGCCGCACGG
GGAAAAGCTACGTTCTGTCTAGGCTACTGGGCTCGGCGGACGCCTTTGAG
CTGGGCCACCGCTGGGACCCGCAGACGTTTGGCATCTGGATGGGTACCAA
GGTCCTAAAGGGCGCGGACTTCACTATCCTGCTGCTGGACACCGAGGGGA
TAGACGCGTCAGGGGGAAGTGCAGACCAGGACGCCGGTATTTTGGTGTTA
ACCATCCTGCTGTCCTCTCTTCTCATCTACAACTCACTCAACGTGCCGTA
CAAGGGGGACCTGGAGAAGATGCAGTGTTTCATCAAGTTGGCTAAAGGCG
TGACTGTGAAGAGAGGACAGAAGACGCAGATGTCGGAACTCCGTGAGTTC
TTCCCGGACTTCCTGTGGCTCCTGCGGGACGTGTCGCTCATGAGCACCGA
CGAGAAGGGGCGGGAGATCGGCCCAACAGAGTACCTCAAGACTCGGGTTC
TCGCACGTGGTGAGGGCTTTGAAGAGACACCTGGCGACAAGGTAGGGCGC
GCCATCCTCACATCGTTTCCATCCGTTGAGTGCTTCACTCTGGAGCGTCC
TTCCGACAATAAAGACATTATGAACAACATTGCAGACCACACCGACAAGC
TGAACCCCGAGTTTAACAAGGGCGTGGGGACCCTGATTGGACTCCTACTG
CAGAAGTCACGTCCCAAGAGGGGATACTACAAGGGGTCGACTGTTAACGG
CGTTGCCCTGAGCCTCATGGTGAAGCAGTATGTGGACGCGGTCAACGACC
CACAGGCCATCCCCGCACTGGACAACACCTGGAAGAACACCATCCAGCTC
ATGCGCAGTAGGGCCATCGAGGAAGCTGTCCAGGAGTACAGAGAAGAGAT
GGCGGTTGGAATCGCGGCTGTTTCTAAGGATGCAGATGTTCAAATCATAC
TGGATGAGGATATTGAAGATGAAAGTGATGAGGCCTTGTCTCTGATGGGC
ATACACAACAAGGCATTCAACAAAGTCACGGGTTGGCTACTGGATAAGAT
AGGGCATCTGGGCATCAGTTCTGGTGACCTTGATGAGGAAAGCGAGGCGG
TGGTTCGGGAAATGCAGGAACGTCTAGTTCGCAGGGAAGAGCGCACGATT
GAATACGTGGATGACGACCTTGTGACCAGACGGGAGCAGGGCATGGCGGT
GGTCGGTGGAGAACTGTACGGCCTCCTGCAGGAGAACCGCGGCCGGTCCC
GCGCCTTCTGCACCGACATATTCAACATGCTCTTCGAGCCGGTCCAGAAG
AAGATCGAGTCTCCGCCCGCCGGGTACGACTTCAGGGGCGCCCTGGATGA
GCTGGACAGGACCCGGGAGCAGTACCGCCGGTGGGCGCGAGGGCCCGAGA
AGTGGACGGTCCTGCAGGAGATGACCAAGAACTGGGACTCCCTCCGAGCT
AACATAAAGAAGATCAGAGGATACCAAGAGAAGCTGATGTTAGAACAAGA
GAGGGCTCACCAAGCCGAGCTGGAAGCCGAGAGGAAGAACCAGGAGGCCA
GGCGGCTGTACAGGCAGCAGCTGGAGATGCAGCGGGCTCACAAAGAGACT
CTGGAGAAGATGGAGCAACTGCACAAATGGCAGATGGCAAAGGTGAAGAT
GGAAGGAGAGGTGTGGCGTTGGGGAGAAGAACAGAAGTTCGAGGACTTCA
GAAGGGCGCAGATGAACGACATGGCAAATCTAACTAGGGAGTTGCAGGAT
AGACATGACAGGGAGGTGCAGCAGCTGAAGTCCCGGATGCAGAGGCAGCA
GGATGAAATGAACGGCAAGATCCGGGAACTGAACGACAGGCTCAGGCGGC
CACCAC
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Feature NameUnique NameSpeciesType
Blg00266.0Blg00266.0-proteinBranchiostoma lanceolatumpolypeptide
The following exon feature(s) are a part of this mRNA:
Feature NameUnique NameSpeciesType
Blg00266.0-exon-Sc0000086-1570713199:8925..9196Blg00266.0-exon-Sc0000086-1570713199:8925..9196Branchiostoma lanceolatumexon
Blg00266.0-exon-Sc0000086-1570713199:8436..8566Blg00266.0-exon-Sc0000086-1570713199:8436..8566Branchiostoma lanceolatumexon
Blg00266.0-exon-Sc0000086-1570713199:8021..8141Blg00266.0-exon-Sc0000086-1570713199:8021..8141Branchiostoma lanceolatumexon
Blg00266.0-exon-Sc0000086-1570713199:7558..7729Blg00266.0-exon-Sc0000086-1570713199:7558..7729Branchiostoma lanceolatumexon
Blg00266.0-exon-Sc0000086-1570713199:6063..6315Blg00266.0-exon-Sc0000086-1570713199:6063..6315Branchiostoma lanceolatumexon
Blg00266.0-exon-Sc0000086-1570713199:4347..4501Blg00266.0-exon-Sc0000086-1570713199:4347..4501Branchiostoma lanceolatumexon
Blg00266.0-exon-Sc0000086-1570713199:3991..4061Blg00266.0-exon-Sc0000086-1570713199:3991..4061Branchiostoma lanceolatumexon
Blg00266.0-exon-Sc0000086-1570713199:3444..3595Blg00266.0-exon-Sc0000086-1570713199:3444..3595Branchiostoma lanceolatumexon
Blg00266.0-exon-Sc0000086-1570713199:2667..3022Blg00266.0-exon-Sc0000086-1570713199:2667..3022Branchiostoma lanceolatumexon
Blg00266.0-exon-Sc0000086-1570713199:2330..2488Blg00266.0-exon-Sc0000086-1570713199:2330..2488Branchiostoma lanceolatumexon
Blg00266.0-exon-Sc0000086-1570713199:1933..2028Blg00266.0-exon-Sc0000086-1570713199:1933..2028Branchiostoma lanceolatumexon
Blg00266.0-exon-Sc0000086-1570713199:1429..1546Blg00266.0-exon-Sc0000086-1570713199:1429..1546Branchiostoma lanceolatumexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Sc0000086genomeSc0000086:1429..9196 -
Properties
Property NameValue
GeneIDBlg00266