Blg00265.2 (mRNA) - B. lanceolatum

Overview
NameBlg00265.2
Unique NameBlg00265.2
TypemRNA
OrganismBranchiostoma lanceolatum (Amphioxus)



Sequence
The following sequences are available for this feature:

mRNA from alignment at Sc0000086:308557..310990-

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>Blg00265.2 ID=Blg00265.2|Name=Blg00265.2|organism=Branchiostoma lanceolatum|type=mRNA|length=2434bp|location=Sequence derived from alignment at Sc0000086:308557..310990- (Branchiostoma lanceolatum)
CTTTAACCTCCAGCTAGGTGAACACATGGATCAGTCTAAAATCAGCTGTT CAGAAATCTGACAATCTTGCGATTTGTGGGACAATTTTGAGAGTCACAGA TTATGGAAAAGGCTAGGAAAAGAAACAAGGAGCTGAGAGACCAGCTTGAA ATGGTAGGACTCTGTTTTTAAGGTTATTTAAACTTGTTTGATATATAATG TTTGATAAAGATGTGTTACTGGTTTTGGCAAGTTTTGATGATTTCTTTGA TGAAACCAAGGAGGTTAAATATACATTGTATATTTAACCTCCTTGATGAA ACCAAAGCACATGTCATCACTGTAACAGCATCTATTATGTTTTTCAAATA CCGTTTAGCCCGCACATATTCTTTGATTTTCGAAGTGACCGTGACTCCGT CATTGCCAAGAATTGTCTTTCCCTTTATATCTCAGCCTTCAGTGCAAATT GTGTTAACTTTTGTCTATCATTTCATGGGATGGCATATTGAAAGTGAAAG TCGACAAAGAAGGTTCAAGAGGTTTTGATTTAGGGAACAAATCTGATGGA TTAGCCACATGCTTCTTTTCCTCCTTTCCTCCATAGTCTCCTGGTCAATA TTAGATTATTTTCATTTGTCAGTGCATGGTCAGTGTAGCATTGTTTGATT AGTCTGTTATTTTGCCCCACCTCAGCTGCAGAAGGTGTGCAAGTTCTGCC AGCAGGAGAAAACAGCCCTCTTGCAGCAGAAGGCAGTACTGCAGCAGTCT GCAGAACCACAGGAACCACTTCAGCCTGACTTACCACAAGCCACACATGT ACAGGAATTGTAAGGATTATGTAACAATTGCCTGTTACACTTTCCTGTTA CGATTCAGTAGCAGCCTTCTAGGAGTGTCATCCTTGTTAGTTCCAGGGTT CCCTTGTTACTCCCTGGAACTAATAAGGATCATGACACTCAGGCTATCCA GAAGGGCCTGTATGCTCTTTTCTAATAGTAAATGCTATACAATTTCACAT AACTTGGAGCAAGGTGAGAGGTGGCAAGACGTTTGTGTGAATAGTAAACT TAGCAATCAACTTGGCAAATGTGTATTCAGATATGATAGACAGCATGTAG GGTAAAAGAAGGCATGATTTTGAAAAAGAAGGTATGGTTGAAAAGGGAAA GGTCCACCATTCTTTGCTATTACAGTTTTCCAACTAAACTTTTGTTTCCG CTACATTTTTTCAAATATGGTGATGACCACTTGTACATTGACTATGTTTC CACGTTGACAGGTATGGTCCAGTGTTGGACAGTGTTGGTCAGTTCAGCCT ACAGGAGCTAAAAGTGCTGGAACTGGAGGAACAACTTCAAATGGTCAAGA TGCAAGAGGAGAGGGACGAGATCAATCACACATTGTCTCAAGGTCTGGAA ATTTGCAGTACTCCATCAATTAAATTTTTTCATGGAATTACATACTGCAA AGAAAAACAGTAACATGTATATGTAAATTTATTCTACAGCTCATTTTGCC ACCAAATCCTGCAATATTTTCGAAGACATTTACACTTGAGCCACATGTGC TTCTCCCTCCATTGGCTGTTTACTATTGTAAATAATAAAATGAAATAGAT TTAATTGTTCATGTTAGACTTGTCCAATAGGTAAATAGTTAACATAGCCT TGCAGTTTTGCATTCTACTGATGTAATGTCAACACTGAACATTCTCAACA GACCAGGAAACAATATTTCTTACTTACACCTGGTTTGCTGTACCAATGTC AGCTCCTTATTTTCAGGATAAAAAAGTCCTCTCTTTCTTGACATATGTTC TTCACACAGTAAGTGACAACAGGTCAGAAGCAGAGGACACAGCCCTATCA GCCCTGGATAGATGGTACAGGGAGATGGAAAAAATCACAGCAGAGGAAAC ATCGCAGAAGAAGTCAGAAAGTAATATAAAAGGTGACTGTCGCCAACTGT AGCACTTGTGGACTTTCATTATTTGTTTTGCAGCTTAAATGATGGAAAAA TAATGTTCTCCTGACACAAAGTAGAGAAAATTTACCCGGTGGACGTTTAA GTAACTCTTCAGTTACCTTCCTCAGGACCTGAATAGACTGTACTACTTCA ATTTTGTGGTCTCGTCCCAAATATGATCTAGTCATTGAATGTATGACCTT ATGTACAAGTTTTTATCTTGATATCTAGACTCATAGGGTTTTTTAAGTCT TTATTTAATACCTTCCATCTCATATAGGCTTCAGTCTGGCTCTAGACAAG CTCTTTTTCAATGTCAAGTTGAAAAGAGGGATGGGGGAGGGCAGACAACT CTCATTTTCTACCAGACATGGAGGGATCTGTATTCACATCTGTATCAAAG AGCCATCACAACACACAGAAAGGTTTGTCACATTTACTTTTAATCATCAC ATTGGTTAAAAGGTACTGGTGTGCAATGCATGGC

Coding sequence (CDS) from alignment at Sc0000086:308557..310990-

>Blg00265.2 ID=Blg00265.2|Name=Blg00265.2|organism=Branchiostoma lanceolatum|type=CDS|length=621bp|location=Sequence derived from alignment at Sc0000086:308557..310990- (Branchiostoma lanceolatum)
ATGGAAAAGGCTAGGAAAAGAAACAAGGAGCTGAGAGACCAGCTTGAAAT
GCTGCAGAAGGTGTGCAAGTTCTGCCAGCAGGAGAAAACAGCCCTCTTGC
AGCAGAAGGCAGTACTGCAGCAGTCTGCAGAACCACAGGAACCACTTCAG
CCTGACTTACCACAAGCCACACATGTACAGGAATTGTATGGTCCAGTGTT
GGACAGTGTTGGTCAGTTCAGCCTACAGGAGCTAAAAGTGCTGGAACTGG
AGGAACAACTTCAAATGGTCAAGATGCAAGAGGAGAGGGACGAGATCAAT
CACACATTGTCTCAAGTAAGTGACAACAGGTCAGAAGCAGAGGACACAGC
CCTATCAGCCCTGGATAGATGGTACAGGGAGATGGAAAAAATCACAGCAG
AGGAAACATCGCAGAAGAAGTCAGAAAGTAATATAAAAGGCTTCAGTCTG
GCTCTAGACAAGCTCTTTTTCAATGTCAAGTTGAAAAGAGGGATGGGGGA
GGGCAGACAACTCTCATTTTCTACCAGACATGGAGGGATCTGTATTCACA
TCTGTATCAAAGAGCCATCACAACACACAGAAAGGTTTGTCACATTTACT
TTTAATCATCACATTGGTTAA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Feature NameUnique NameSpeciesType
Blg00265.2Blg00265.2-proteinBranchiostoma lanceolatumpolypeptide
The following exon feature(s) are a part of this mRNA:
Feature NameUnique NameSpeciesType
Blg00265.2-exon-Sc0000086-1570713199:310838..310990Blg00265.2-exon-Sc0000086-1570713199:310838..310990Branchiostoma lanceolatumexon
Blg00265.2-exon-Sc0000086-1570713199:310182..310315Blg00265.2-exon-Sc0000086-1570713199:310182..310315Branchiostoma lanceolatumexon
Blg00265.2-exon-Sc0000086-1570713199:309599..309729Blg00265.2-exon-Sc0000086-1570713199:309599..309729Branchiostoma lanceolatumexon
Blg00265.2-exon-Sc0000086-1570713199:309059..309181Blg00265.2-exon-Sc0000086-1570713199:309059..309181Branchiostoma lanceolatumexon
Blg00265.2-exon-Sc0000086-1570713199:308557..308763Blg00265.2-exon-Sc0000086-1570713199:308557..308763Branchiostoma lanceolatumexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Sc0000086genomeSc0000086:308557..310990 -
Properties
Property NameValue
GeneIDBlg00265