Blg00265.1 (mRNA) - B. lanceolatum

Overview
NameBlg00265.1
Unique NameBlg00265.1
TypemRNA
OrganismBranchiostoma lanceolatum (Amphioxus)



Sequence
The following sequences are available for this feature:

mRNA from alignment at Sc0000086:307155..310978-

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>Blg00265.1 ID=Blg00265.1|Name=Blg00265.1|organism=Branchiostoma lanceolatum|type=mRNA|length=3824bp|location=Sequence derived from alignment at Sc0000086:307155..310978- (Branchiostoma lanceolatum)
GCTAGGTGAACACATGGATCAGTCTAAAATCAGCTGTTCAGAAATCTGAC AATCTTGCGATTTGTGGGACAATTTTGAGAGTCACAGATTATGGAAAAGG CTAGGAAAAGAAACAAGGAGCTGAGAGACCAGCTTGAAATGGTAGGACTC TGTTTTTAAGGTTATTTAAACTTGTTTGATATATAATGTTTGATAAAGAT GTGTTACTGGTTTTGGCAAGTTTTGATGATTTCTTTGATGAAACCAAGGA GGTTAAATATACATTGTATATTTAACCTCCTTGATGAAACCAAAGCACAT GTCATCACTGTAACAGCATCTATTATGTTTTTCAAATACCGTTTAGCCCG CACATATTCTTTGATTTTCGAAGTGACCGTGACTCCGTCATTGCCAAGAA TTGTCTTTCCCTTTATATCTCAGCCTTCAGTGCAAATTGTGTTAACTTTT GTCTATCATTTCATGGGATGGCATATTGAAAGTGAAAGTCGACAAAGAAG GTTCAAGAGGTTTTGATTTAGGGAACAAATCTGATGGATTAGCCACATGC TTCTTTTCCTCCTTTCCTCCATAGTCTCCTGGTCAATATTAGATTATTTT CATTTGTCAGTGCATGGTCAGTGTAGCATTGTTTGATTAGTCTGTTATTT TGCCCCACCTCAGCTGCAGAAGGTGTGCAAGTTCTGCCAGCAGGAGAAAA CAGCCCTCTTGCAGCAGAAGGCAGTACTGCAGCAGTCTGCAGAACCACAG GAACCACTTCAGCCTGACTTACCACAAGCCACACATGTACAGGAATTGTA AGGATTATGTAACAATTGCCTGTTACACTTTCCTGTTACGATTCAGTAGC AGCCTTCTAGGAGTGTCATCCTTGTTAGTTCCAGGGTTCCCTTGTTACTC CCTGGAACTAATAAGGATCATGACACTCAGGCTATCCAGAAGGGCCTGTA TGCTCTTTTCTAATAGTAAATGCTATACAATTTCACATAACTTGGAGCAA GGTGAGAGGTGGCAAGACGTTTGTGTGAATAGTAAACTTAGCAATCAACT TGGCAAATGTGTATTCAGATATGATAGACAGCATGTAGGGTAAAAGAAGG CATGATTTTGAAAAAGAAGGTATGGTTGAAAAGGGAAAGGTCCACCATTC TTTGCTATTACAGTTTTCCAACTAAACTTTTGTTTCCGCTACATTTTTTC AAATATGGTGATGACCACTTGTACATTGACTATGTTTCCACGTTGACAGG TATGGTCCAGTGTTGGACAGTGTTGGTCAGTTCAGCCTACAGGAGCTAAA AGTGCTGGAACTGGAGGAACAACTTCAAATGGTCAAGATGCAAGAGGAGA GGGACGAGATCAATCACACATTGTCTCAAGGTCTGGAAATTTGCAGTACT CCATCAATTAAATTTTTTCATGGAATTACATACTGCAAAGAAAAACAGTA ACATGTATATGTAAATTTATTCTACAGCTCATTTTGCCACCAAATCCTGC AATATTTTCGAAGACATTTACACTTGAGCCACATGTGCTTCTCCCTCCAT TGGCTGTTTACTATTGTAAATAATAAAATGAAATAGATTTAATTGTTCAT GTTAGACTTGTCCAATAGGTAAATAGTTAACATAGCCTTGCAGTTTTGCA TTCTACTGATGTAATGTCAACACTGAACATTCTCAACAGACCAGGAAACA ATATTTCTTACTTACACCTGGTTTGCTGTACCAATGTCAGCTCCTTATTT TCAGGATAAAAAAGTCCTCTCTTTCTTGACATATGTTCTTCACACAGTAA GTGACAACAGGTCAGAAGCAGAGGACACAGCCCTATCAGCCCTGGATAGA TGGTACAGGGAGATGGAAAAAATCACAGCAGAGGAAACATCGCAGAAGAA GTCAGAAAGTAATATAAAAGGTGACTGTCGCCAACTGTAGCACTTGTGGA CTTTCATTATTTGTTTTGCAGCTTAAATGATGGAAAAATAATGTTCTCCT GACACAAAGTAGAGAAAATTTACCCGGTGGACGTTTAAGTAACTCTTCAG TTACCTTCCTCAGGACCTGAATAGACTGTACTACTTCAATTTTGTGGTCT CGTCCCAAATATGATCTAGTCATTGAATGTATGACCTTATGTACAAGTTT TTATCTTGATATCTAGACTCATAGGGTTTTTTAAGTCTTTATTTAATACC TTCCATCTCATATAGGCTTCAGTCTGGCTCTAGACAAGCTCTTTTTCAAT GTCAAGTTGAAAAGAGGGATGGGGGAGGGCAGACAACTCTCATTTTCTAC CAGACATGGAGGGATCTGTATTCACATCTGTATCAAAGAGCCATCACAAC ACACAGAAAGGTTTGTCACATTTACTTTTAATCATCACATTGGTTAAAAG GTACTGGTGTGCAATGCATGGCAAGTGATGCTTACAAATACAATACAAGG AGTTACCAAGCACAAAGTATAAAATTAATGGCAGTTTTGAAGTGGTCAAT CCTTTTATGACTTTGAAGTGTTTTTTTAATGTTGTTCAGGTGGCTTTCTC TTTTAATTCTACTCCACATATTTCACACTTTTCTTGGTCACAGTCAATGC TTTCCATGCCAAGTTTGCATTCATTTTCATATATTCTAGTCAAGTCAATT ATGACTATGTTAGCTTTCTTTGTCTTTGATTGCATTTACTCATAATCTTA TACATATAACAATGCTCTACAATGTCATTGTACAGCAACATGTTTCTTTT TACTCAACAAAGTTTCATAAAAAGCTGAACCAACAATCTGAAAAAAAAAC TAGCAATGTTACACAATGCTGTGGCAATAACAAGAGATGGTGACTAACAA TATTGTACATTCATGTACCTTACAGATCTCAGGATATGTCCCCAGATATC ATGTACCTGGTACAGTCGGACCTGTACGTCGCTGATTTACCTGCAGAAGG GAACAGATACCTGAAGAACAGACTGTCTGTTGCTGACTTTGTGAGAGACA TCGTGTGGAAACACATAAATGAAGTCTGTTTGGCCTTGTCATGACACAAG TAAACTCCATCAAAGTGTACCTTATGTGTGCACTGATCTTACACTGTAGC AACCCTCTACTTCTATGCAATTGCAATTTTTCAGTATTTAAAATATTGCA TAGTCTCCAGTTTAATATGAAGTTAATATTTTGTTAACATTAATGTTTTG TGAATCGGTCACATATTCTCTTTGTATTTTTTCAAAGACTTATCAGTAAT ACATTAAGCAACAAGTTACAAGAATATTCATCAAACAAAAGACATGAAAA AAGCCTGATTTTTGTGTCTTTCTTGTGACAAGATTTCTTGAGTTTGATCA CCAAGCTGCTCTACTCATTTAAAAACAACATTGACATTTTCTTTTAAATA CTATTGCAAAAAAATTGTGTTGTACCCTGTATATGATAAACCTGAATGAC TGAACCACGGACCACACTGTAACTGCAAACTGAACCTAAATGGTAGTGTC ACGTTTACACCTGTTACGACCTGTATGAAAGGAAACATTTTTAATACTAT TTGGAACATGTTTGAGAACTACATGTATTTGCATATATATGAAACACTTG AAGCAGCGGTGGCTGAGAAAAGGCAACCTCTTCATACAAAAAATGTATAA TTAGCAGCAACAGCTTGATAGTACATGTGCACTGTACTATTAATCAAGGC CTTATACATGGCTGAAGCAGTATTTTCTAAACCTACTTTATTCTCTAGTC AGGCAAATTTATTTCACTTGATTTCCCATTCAGGTACCCACATCTTTTGG GGAAGAATAAAAAAGTGACCATGT

Coding sequence (CDS) from alignment at Sc0000086:307155..310978-

>Blg00265.1 ID=Blg00265.1|Name=Blg00265.1|organism=Branchiostoma lanceolatum|type=CDS|length=753bp|location=Sequence derived from alignment at Sc0000086:307155..310978- (Branchiostoma lanceolatum)
ATGGAAAAGGCTAGGAAAAGAAACAAGGAGCTGAGAGACCAGCTTGAAAT
GCTGCAGAAGGTGTGCAAGTTCTGCCAGCAGGAGAAAACAGCCCTCTTGC
AGCAGAAGGCAGTACTGCAGCAGTCTGCAGAACCACAGGAACCACTTCAG
CCTGACTTACCACAAGCCACACATGTACAGGAATTGTATGGTCCAGTGTT
GGACAGTGTTGGTCAGTTCAGCCTACAGGAGCTAAAAGTGCTGGAACTGG
AGGAACAACTTCAAATGGTCAAGATGCAAGAGGAGAGGGACGAGATCAAT
CACACATTGTCTCAAGTAAGTGACAACAGGTCAGAAGCAGAGGACACAGC
CCTATCAGCCCTGGATAGATGGTACAGGGAGATGGAAAAAATCACAGCAG
AGGAAACATCGCAGAAGAAGTCAGAAAGTAATATAAAAGGCTTCAGTCTG
GCTCTAGACAAGCTCTTTTTCAATGTCAAGTTGAAAAGAGGGATGGGGGA
GGGCAGACAACTCTCATTTTCTACCAGACATGGAGGGATCTGTATTCACA
TCTGTATCAAAGAGCCATCACAACACACAGAAAGATCTCAGGATATGTCC
CCAGATATCATGTACCTGGTACAGTCGGACCTGTACGTCGCTGATTTACC
TGCAGAAGGGAACAGATACCTGAAGAACAGACTGTCTGTTGCTGACTTTG
TGAGAGACATCGTGTGGAAACACATAAATGAAGTCTGTTTGGCCTTGTCA
TGA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Feature NameUnique NameSpeciesType
Blg00265.1Blg00265.1-proteinBranchiostoma lanceolatumpolypeptide
The following exon feature(s) are a part of this mRNA:
Feature NameUnique NameSpeciesType
Blg00265.1-exon-Sc0000086-1570713199:310838..310978Blg00265.1-exon-Sc0000086-1570713199:310838..310978Branchiostoma lanceolatumexon
Blg00265.1-exon-Sc0000086-1570713199:310182..310315Blg00265.1-exon-Sc0000086-1570713199:310182..310315Branchiostoma lanceolatumexon
Blg00265.1-exon-Sc0000086-1570713199:309599..309729Blg00265.1-exon-Sc0000086-1570713199:309599..309729Branchiostoma lanceolatumexon
Blg00265.1-exon-Sc0000086-1570713199:309059..309181Blg00265.1-exon-Sc0000086-1570713199:309059..309181Branchiostoma lanceolatumexon
Blg00265.1-exon-Sc0000086-1570713199:308619..308763Blg00265.1-exon-Sc0000086-1570713199:308619..308763Branchiostoma lanceolatumexon
Blg00265.1-exon-Sc0000086-1570713199:307155..308103Blg00265.1-exon-Sc0000086-1570713199:307155..308103Branchiostoma lanceolatumexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Sc0000086genomeSc0000086:307155..310978 -
Properties
Property NameValue
GeneIDBlg00265