Blg00264.0 (mRNA) - B. lanceolatum

Overview
NameBlg00264.0
Unique NameBlg00264.0
TypemRNA
OrganismBranchiostoma lanceolatum (Amphioxus)



Sequence
The following sequences are available for this feature:

mRNA from alignment at xpSc0040123:1339..3281-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>Blg00264.0 ID=Blg00264.0|Name=Blg00264.0|organism=Branchiostoma lanceolatum|type=mRNA|length=1943bp|location=Sequence derived from alignment at xpSc0040123:1339..3281- (Branchiostoma lanceolatum)
ATGCCTGTGCAATTCTGGGAATTCTTACAGAACGGGCGTAAAGTATACTA TTAGGCTCGCCCCTGAGGCGTCGCCAAAAAAAAAAATACGTGAGTCAAGT AAAGGTAGAGTTAGTTCTACGGTCCATTGAGGTCACCATTCCCTTCTAGC CAACTCCTAAGCTAGCAACATGCTAAAAATCACACGCCCATAAGTTTAGA CTATTGAGTTATGAAATATACTCATTTATAATGCACATACACTGGTATTC TTGGTCGAACATAGATTTTGTTAATGTGCCTAAAGGCTATTGCCTAGGCA ATGCCGAGACAATGTTGGGTGGAACTTTGAACACCTAAGTCGTCCTCGCA ATGTATGATATAATTTTTCGGTCGTCAGTTTTCAAATACATATCAAGTCC TCTATCAACTGAAAGTAAAGTAAAAACATTTTTAGTCGAACTTAGATTTT GTTAATGTGCCTACAGGCTATTGCCCAGGCAATGCCTAGGCAATGTTGGG TGGAACTTTGAACACCTAAGGCGTCGTCACCTTGAATGATATAATTTTGC GGTCTTCAGTTTTCAAATACATATCAAGTGCCCTATCAACTGAAAGTAAA GTAAAAAAATTCTTGGTCGAACATAGATTTTGTTAATGTGCCCATAGCTA GGCTATTGCCTAGGCAATTCCTAGACACTGTTGGGGGGAACTTTGAACAC CTAAGGCGTCGTTAGCATGAATGATAAAATTTTGCGGTCTTCAGTTTTCA AATACATATCAAGTGCTCTATCAACTGAAAGTAAAGTAAAAAAATTCTTG GTCGGACATAGATTTTGTTAATGTGCCTATAGGCTATTGCCTAGAATGTT GGGGGGGAACTTTGAACACGTAAGGCTCCCTCGCCATGTATGATATAATT TTGCGGTCTTCAGTTTTCAAATACGTATCAAGTGCCCTATCAACTGAAAG TAAAAAAATTCTTGGTCGAACATAGATTTTGTTAATGTGCCCATGGGCTA TTGCCTATGGGCACAATACTTTTCAAATGTATTTGAAAACTGAAGACCAC AAAATTTTATCATTCACGGTGACGACGCCTTAGGTGTTTAAAGTTGCCAC CCTCATTACCTAGGCATTGCCTAGGCAATAGCCTTTAGGCAATAGCCTAT AGGCACATTAACAAAATCTATGTTCGACCAATTTTTTTTTACTTCAATGG GACTACGGGTGAGCAGGGAAGAATATACGTAGTTTGTTGTGAATTATGTT TTAAAATAAAATTGCAGAAAATTTGATCTACAATCCAAACGACGGAACAT TTTTTTCTAGACAGAATCTAGACAAGATTGCAGCAGTGTTTTTAATGTTC TTTGTGACAATCAACTTCCCAATTCTGTTTAGGGCTCTTCACGCCCGCGC ACGGCAATCCAGATGTTGTGTGTAGCAATGAGCAATGCAGTACCGTCACA TGGAGCCAGGGGCCGCCTTCCATCAAGCTGAGGAACGCACCACAAAAGGA CACAGTCTTGCTTTCAGCCCCCGGTTACATGGTTGTCCGATTTAGGTAAG TCCATTAGCAAGCATATGATGCACCTCAGCCAGGAGAGAGGGTCCTTCCT TGCATTTGTAGTAAAAGGGTAAAGCCACTGAAGTTTTTGTAGGTGCAATT TTACAATCCCTGCCACTTTCTCGACGTTGTTTCATAGACAAATTGCATGC CGATTAATGATGGCCTGCTCAATCTTGTTTAGATCTGACAACCCTGGTTT CTGGCTTCTTCACTGTCACCAGTCCATGCACCTGGCGGAGGGAATGGCCA TGGTGCTGAACGTGGCGGGAGACCTCCACCCAGCGCCCCCTAGCGGTTTC CCCAAGTCCGGCAACTTTGGCTTGAGCGAGGAGGCGCCATGTCCGGATCT TGGCCTGCTAATCAAGAGGTTTATAGTGGTGCTTCTGTATTAG

Coding sequence (CDS) from alignment at xpSc0040123:1339..3281-

>Blg00264.0 ID=Blg00264.0|Name=Blg00264.0|organism=Branchiostoma lanceolatum|type=CDS|length=411bp|location=Sequence derived from alignment at xpSc0040123:1339..3281- (Branchiostoma lanceolatum)
ATGCCTGTGCAATTCTGGGAATTCTTACAGAACGGGCGGCTCTTCACGCC
CGCGCACGGCAATCCAGATGTTGTGTGTAGCAATGAGCAATGCAGTACCG
TCACATGGAGCCAGGGGCCGCCTTCCATCAAGCTGAGGAACGCACCACAA
AAGGACACAGTCTTGCTTTCAGCCCCCGGTTACATGGTTGTCCGATTTAG
ATCTGACAACCCTGGTTTCTGGCTTCTTCACTGTCACCAGTCCATGCACC
TGGCGGAGGGAATGGCCATGGTGCTGAACGTGGCGGGAGACCTCCACCCA
GCGCCCCCTAGCGGTTTCCCCAAGTCCGGCAACTTTGGCTTGAGCGAGGA
GGCGCCATGTCCGGATCTTGGCCTGCTAATCAAGAGGTTTATAGTGGTGC
TTCTGTATTAG
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Feature NameUnique NameSpeciesType
Blg00264.0Blg00264.0-proteinBranchiostoma lanceolatumpolypeptide
The following exon feature(s) are a part of this mRNA:
Feature NameUnique NameSpeciesType
Blg00264.0-exon-xpSc0040123-1570713199:3245..3281Blg00264.0-exon-xpSc0040123-1570713199:3245..3281Branchiostoma lanceolatumexon
Blg00264.0-exon-xpSc0040123-1570713199:1737..1899Blg00264.0-exon-xpSc0040123-1570713199:1737..1899Branchiostoma lanceolatumexon
Blg00264.0-exon-xpSc0040123-1570713199:1339..1549Blg00264.0-exon-xpSc0040123-1570713199:1339..1549Branchiostoma lanceolatumexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
xpSc0040123genomexpSc0040123:1339..3281 -
Properties
Property NameValue
GeneIDBlg00264