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Sequence
The following sequences are available for this feature:
mRNA from alignment at Sc0000807:6235..13933- Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >Blg00263.1 ID=Blg00263.1|Name=Blg00263.1|organism=Branchiostoma lanceolatum|type=mRNA|length=7699bp|location=Sequence derived from alignment at Sc0000807:6235..13933- (Branchiostoma lanceolatum)
GGGCGTTTGTGGGCATTCGCTAAAAAGCCTGTCCCCTTTAGAAATTGACA
TGTTGCCAAAGAACACCGATTAATGTAAGGGTAGAACGTCCTATTTTGAC
CTACGACCCCTTCCGGGTGACAATAGCTATCGGCCCAAAGGTCAGCTTAT
CACACGGAAGTCAGACGTACACGTCCCCTGCAAACAGACAAGCGTGCAGC
ATGGATTTTTTAACGGAGGTCGTGGCGACTGTTTGGCAGTACACGGATAC
TTCTACCCTCCTCGTTGCGGCCTGTGTGTGCCTGATGACGTACCTATACC
TGCAGACCCCCCGGAACCTCCCCCCTGGGCCCTGGGCCTGGCCCGTCCTG
GGGAACATCCCGCTCTTTATGACGTCAAAGGTCAGTTTTGAAGCACATGC
TAACACCCCATTTTCACTTGGTCGGCCACCTCAATGCGCCCCGAGAATTT
AACAGATCTCGCTCAAAGAATTTCATAGATAAAAGGTATATTTCAAAACG
CTTTGTGTGTTTTGTTGTCTTTTTAGTCATGCATGCTTTTACATTTTGCA
TGATCCACTACTTATGAAATCAATGGTTACCCAAATCTAATTCATTGGTC
GCAGCGAGGTCGCAGCGCGATCACCTTCTACCGGAAAGGGTAGCCTAATC
ACCAGCTGAAAACTTGAGATACATGCACTGTCGTCGAAGCCATGTCAAAT
TTGCAATGTTCGCATTACGTTATGCACTAGATAGCTGTAAACAATGCCTA
CAGTTAGATGTGCAAAGGTCGTTTGGGACAGGTCATTCAGTGTAATTAAC
CGTCCGCTGTCGCGCCTGCAAATCTTGTACGTTGCACCGAAGGCAGTTAT
GACGGCTATAAAAGGAAAAGGAAAGGAATCTCGAACCAGTTTAGCTCAAA
TGAACTCAATGAACAGATGAGATACTCTTCCACTGGTCGTGACAGAGAAG
ACAGACGCTATGTACAGTATTTACAGGTTCATTGTACCGGGGAAATTCCC
CTAGCTCTTTTCGACAAGCACAATGAACAGTGGACCACGGCTTAACGTCC
CGTCCTAAGGACTGCGATCTTTAACGGTAGCGTGCATGTCGGGTGAGCGA
CACAGCCGGGATCGAACCCGGGGCTTCTAGTTCCAGAGGCAAGATCGCTA
ACCACTGGACTACGCACGCTACGGCTATATAGATACGGATACAGATTGTG
TCAAATATTATGGAAAGCTCATATGTTATATACCCCTATATGATATTACC
CCACTCATTATGATCCATGGATCGAGTGTCAGTACCGACGATGTGAACGG
ACAAATCATCGAGGGAAAATGTGTGTGACCAGTGCCATAAAGGGTGACAG
TGCAAAGGGCAATCTAGCTTGTAAGATAAGGATGAGAGAAGATAACATTA
GGTTTCCAGTCCACTGTGCTCTGTCGCACTTTGCAGCTACAATCAGTCAA
ATATTGAGTACATGTGCTGTCGTCGCAGCCATGTCAAATTTGCAATGTTC
TCATTACCTTATGCACTACACTAGATAGCTTTAAAAAAAGACATACATAC
AGTTAGGCTTAGCCTATATATAGCAACACATACAACGGAAATATGATCGA
CCGAAACGAAAGTTCCACAGTTTTCTATAAGGTTTAGTTCAGGCCACCTA
CAAACAACTGTAACTAAAACGATTCAGCAGCGTTTTGCCTGAGAACAATT
ACAATTGAAAGGAGAATTGGAGAACATGGAGACATCGTGTTACTTAGTGT
GTGTTACAATTACATGTTATTTCTTCATTTGTATGTGATTTGTAAAATGT
TCGCGATATTCAAGTATAGAAAAAAACATTGCGTTCCCTGACTCATTGCC
AACTGTATCACAACCAGATCGAGTTCTTTCCCGACACCATCACCGACCTG
GCCGAGCGGTACGGTGACGTCATGACCTTCTGGAACGCCCGGGACCTGAA
TGTCGTCATCAGCGGGTACCGGACCATCCGTGACGTCATGGTGAAGAGGG
CTGCAGACTTCTCCAGCCGGAAAGTTCCTCTCGTCCTGGTGGATCTACGT
GGAGATGGAAAGTCTAGATATACAACCAAAGGTAAAGTTATCATATCTTA
ACATGTCAAACTTAGATCTCGATTAACGTCCAGAAATACGAAGTTATCAT
ATCATGTCGAACTTATATCTTTATAAACATCTATAATTGTAAATACACCT
GAATGCAAAGTTATCATATCTTACCATATCAAACTTATATCTTGATTAAC
ATCCAGAAATAGGAAGTTATCATATCATGTCTAACTTATACATTGATCAT
TGATGAATGTCTATAAATACAACTAAAGCTAAAGCTATCATATCATATCA
TATCATGCCGAACTTAGACATTGATGAACGTCTAGAAATACAACCGAAGG
CAAAGTTATCATATCTTATCATGACAAACCTACATCTTGTTTAACGTCCA
GAACTACGAAGTCATCATATCATGTCGAACCTAGACATTGATGAACGTCT
AGAAATACAACCAAAGGCAAATTTATCATATCTTATCATCTCAAACTTAT
ATCTTGATTAACGTATAGAAATACGAAGTTATCATATCATGTCGAACTTA
TAAATTTATTTGATAAACATCAAGATATGCAAAAAAAGATAAAGTTATCA
TATCTTAACATGTCAAATTTAAGTCTTGATTAACGACCAGAAATATAAAG
TTACCATATCATGTCGAACTTATAGCTTAATGAACGTCTATAGATACAAC
TGAATGCAAAGTTATCGTATCTTATATCAAACGTATATCTTGATTAACGT
CCAGAAATACCAAGTTATCATATCATGTCGAACTTAGACGTTGATGAACG
TGTACAAATACAACTAAAGGTAAAGTTATCATACCTTATCATGTCAAACT
TATACCTTGATTAACACATTTGCTCATTTTCCTTTCCTTTGATTTAGAAT
ATGATCGAGTAGTTATATGGTTGACAACCGGTATTTTGCTCTTCTAGACT
AAGATATAAGAATAAGATATGAGATTATGGGATTTTAATTGACACAAACA
TGTAAGGGTTACGCAATTATGTCCTCGAAATTTTCTCTAAGTTCTGTCTA
TGACAAAAGTTAATTGGGCAGATTAATTAGGCCTCAAGTGCCAAATTGAT
CAAAGATGTACATTCAAGAATGATTTGTTTGGAATTCCATGTACATAATT
CCATCTTTGCCTGTGTTTAGGGTCACATTTCTAAAACGGGGCCCGGCCGG
GCAGCTTGTGGGAACGAAAAATATCAAAAATATAAAAGACAACAATAGAC
ACAAAACGTAAACAATTGTGTAAACTATAAATTGTGTATTTTCTTGATAT
GCATTTCTTATTTTCGTCTTCGAAAACAGCCCGGCCGGGCCCCGGATTCG
AGATGTGACCCTAGCATCAGAGGTGTCATACATGTAAGTTAACATAATGG
TTTATTTTCAGGTATAATCTTCGCCCATTACGGACCTGACTGGAAGGAGC
AGAGGAAATTTACCATGAAGACCCTCCGAGACTTCGGCGTCGGCAAGCGG
AGCCTGGAGGGGAAGATTTGTGAGGAGGCCGCAGCTCTTAGTCAGGAACT
CGTGGCGAAAGACGGTCAGCCGTTCAACATCAAGCATCTAATGCAAAACG
CAGTTTCTAACATCATCTGCTCCATCGTCTTCGGGAAGCGGTTCGAGTAT
GGCGACCCCGAGTTTTTGCAGCTCAGTCACCACGTAGGCGAGCTGATAGA
TTCCACGCCCGGGAAGGACCTTCTCGTCAACATCCACCCCGTGTTTCGCC
ATCTTCCTTTCGGATCGCCGGAACATGAGAAGATATCGAGGAACATTCCC
AAACTCCAGACGTATTGTAGGGGGCAGATAGAGACGCACAGGGATACCTT
TGACCCTAACGACATCCGGGACTTTATCGATGCCTTCCTGTTGGAACAAC
AGCACGTCGGTGGAGAGCATGCGCAGTCCAGCTTCACAGACGAACAGCTA
CAAGAGGTCAGTCGTCTGTTGACATAGGTGTTGATCAGTTGTTTGTGTTA
ATTCAGCAATGATACAGGCAACGTGGCTAATGCATTCTTCAACAATTGAA
TATCATATGTTTGATAAATTGATGAAAAAAATTAAGCAGACTATAGTATG
TAAACATTTAGAAGTATTTGTATTGATGTAAACAAACAACACAAACAACT
TTAAAACGTATGATGATGATGATAGTATAATGATAGCAAAAGCTAAAAGT
AAGGTTTATCGTTGGACAGATTGGGAGAATAGGTAAGCGCGAAGCAATGC
ATCTTAAAAATAGTTAATGGCATTTTCTATTTAAAAAATAGGAAAAAATG
TATGATTGAGTCAAGTTGGTCTCTTGCATTCGCCAACCAAGCTGCCATAT
ATAAATGTCTCCAATAATTCCATATAACATCATAAATCATTGCTATCGTA
TAATCTATCTACAGCTGGTACTGGACCTGTTTCTAGCTGGTACGGAGACC
ACCGCCACCACCCTGGACTGGACCCTACTGTACATGCTGCTGTATCCGGA
TATACAGGAAAAGGCAAGTTTATCTGCCACGTTCGCCAAATTCTTCAAAT
GTTCGTGTATTGTTTTAATCATCGTTTCTATTTGTTATAATCCAAACAAA
CAGGAAATGGCATGTTTGGGTGCAAACAGTTCGCTACAATTTCTATCTCA
CTTTAAACAAAGAAAGATTTGGACAAAAATCTATGGACATCCCCAAATAG
GTGCACGGAGAGATCGATTCTGCCCTGGGACAGGCTGTTCCGTCCTACGC
CCTCCGGGACAAGATGCCCTACACAACAGCGACCCTAGCGGAAGTGCACC
GTATCAACACTATTGTACCTCTCAGCATTCCCCATTCTCCATCCTCGGAG
ACGACTCTCAATGGTTATACCATCCCAGCAGGCACCAACATCTTGGTAAG
ATATCGATATCTGTGGCAAATGTGAACTGTGTAGCAAAAGTCATGAAACC
TCATAACCACATTTTCATTCCAACAAGGTTGTTTAGCGATTGCCCAATGC
AAATTACACACTATTTGCTTGTTTGAACCTTTGTTTATTAATGATAAGCT
CAAATCGGCACGCAAGCCGCTTTTCATTGAGGTCATGAGGGAAGAGGTAA
GGGTCAAATACAATATAGCAGAGATACAGAGATATTTGAGTCCTAATAAC
TCTATCAGCATCTATTATTATATATTTATGTTAGAACAATATACAATTGC
TACAACATTCAACATATAGTAGGGCGAAAGCTGGTTCATGGTCCGTGTCC
GTTCGTTTTGTTCATTTCCGTTACTTCAAGAGTCAGATTCGGAGCCGTAC
GTGTGTCTGGCGGTAGGCTGTTCCAGACATTTGGTCCACGGTAGGCTACC
GATCTTCTGAAGGTCTCTCGCTTGGGTTTGGGGACAACCAGCTGGCTGCT
TGTGCTTTGTCTGGTTGTACGAGTACTCTGGTCTCTGCAGTACACAAACA
TCTGGCGCATGTAGGGTGGCAGTTTGTTGTTTAGGGCTTTGTAGATTTGT
ACGGCATTGTAGTACTGGTGTGTTGCTTTAATGTCTTTCCAGCTCAACCG
AGAGAGTACTTCGGTTGATGGTGTTCTACGTGGGGCCTTTGGTGTCAGTT
TTTCAGTCCGATTCTGCATACTATGTACAGATGAATTTGACGATTGGTGT
CTTAATGCGACAATGTTGAATACAGACCAATAGGAACAAAAAAAGAAGAA
AAATTGAATAAGACAGGTGTAGTTGGAAGACTACGCCTCAATTTCCTAAG
GCATTTAAGATTGCGACAAAGCCATTTGTTCAGTGGCAACCCACCCCTAA
CACATCTCTAATACTTGACATAGCTTTACGTGTTTTGTTGCAGATGAACC
TGTGGTCCGTGCACATGAACCCTCAGCTGTTCCCGGAGCCGGACAACTTC
AACCCCGACAGGTTCCTGGATCAGGACGGAAACTTCGTCAAGCACGAGGC
GCTCATCCCGTTTTCTGTAGGTGAGTGGTGTGGGTCTTCACGTGTCAGGA
CGTTTTGAGCACCTGTAACAGTTGGCCCTCTAGCCAATAAGGACAGTTCA
GCACCAAGAAGGCTCGGGTATATGGTTCGGGTAACAGTTGGGGCTGATAT
TAGCTTTATGATTATGATTATGATTGAGGTTAGACAGTTTGTCGAACTGT
CCTGGACCTGGTGCCGAATCGCACGGGTGGGCTGGGAGTCTAACTGTGCA
TCTGCATGGTGACGTCATGGAATCCATGAGCTCTCGCGACAACAGGCTTC
AAATTTTCTCTTAACAACACAAATTCTCGTGGATGTCCAAGGAAGGTAGC
ATATTGACAAATGTTGTTGTTGTTGTTGTCCGCAGTTACACCGCTGTCTA
GTCGGTTGATGATCACATCTGCTTTTTTTGGCAGTGACATGTCATGTCAG
ATAAGGACCTTTGTCCTTCTTTTTCAACTATTGTAATTCGTATACAGAAA
CGACTTTGTCGTGTCATCCTCAAGTAGATGTACAGTTTTGGCTTGTTGTG
GCGTTTTGTCCCTTTCTGGAGCACCTTTTTCGTAAAACCAGCCGTAGCCA
TACATATTTGGTTGAATATAGGCGCCTTCCACGTTTTCATCGCATTTGTC
TTTTAACCATGGCTTCAGGTCCTCGAGTGTGTCTGGGCGAACAGCTGGCC
AAGATGGAGGGTTTCCTGCTCTTTGTTTACCTGATGCAGCGATTCACATT
CAAACTGCCAGAGGGCGCCACTAACGTATCCACGGTCGGGACCATGACGG
CTCTTGTAAACGCCCCACGTCCTTACGACCTGTGCGCCGTTCCACGACAG
TAGGCATCTACGGCTGAAAGAAAAATAAAAGTTGAAATGATTCTCAAAAT
GTGGTTGTCATATCTTGAGTCTTAATGTGTGTAGAATCACGTAGAAGAAC
ACTTGAACAGCAGAAACCACACGACCACCCCTGTAACCAAGTGGACAACT
CCTGAGAGATATCCGCCCACATATAACGCTAGAATAACTCGTTACGAACA
CATCAAACAGTCTCTTTTGACCTTTGAGTTTCGAGGAAGAAGCCACGACA
ACGTAACTCTCAGGTAAGGACTTACCGATGTGTAATGCATCTTTCACATG
CTGGGGTTTCCACAAATATGAAGATATCAGAATATTGGCCTTGTTTTCGT
CCGCGTCTTTGGACGAAGTTTTCACAATGTTAGTTACTGACTTCATGGTC
TTCGTGCTGATTTAAATGTTCTGCTAAGAAATACCGATGGAACCGACATT
TGATAGATGTGGGTTGACTTGTCATAAGAGGTTTAGAGAGACAGTTTGAT
TAAATATCGTAAAAAGATAGAAAAATTATTACCTTTTGACCTACATAAGT
GAGCCACGGGAATAGATAGATTATATGACCAGGCAGACATGTTCTGAGTC
TGAGCAACGAGGTTTAAAACTTCTAGGTCTGAGTCTGATTGTAAGCAAAC
CTTGTAAGGGTGTAACAGATGACGCTCACTTTCTTTTTATGTTGTGGCGT
TAAGTTAATTCTTGGTTTAGTAGCAAATAAAGCAGAACCTGTCTTATTGA
ATATGGAGGTAAAGTCTTGTGATGATCACGAGATATGTGTGTTTGTTTTA
AGGAAGGGTTATCGTGGGAAAAATTAGATTAAAATCTCGTACTACTAGT Coding sequence (CDS) from alignment at Sc0000807:6235..13933- >Blg00263.1 ID=Blg00263.1|Name=Blg00263.1|organism=Branchiostoma lanceolatum|type=CDS|length=1398bp|location=Sequence derived from alignment at Sc0000807:6235..13933- (Branchiostoma lanceolatum)
ATGGATTTTTTAACGGAGGTCGTGGCGACTGTTTGGCAGTACACGGATAC
TTCTACCCTCCTCGTTGCGGCCTGTGTGTGCCTGATGACGTACCTATACC
TGCAGACCCCCCGGAACCTCCCCCCTGGGCCCTGGGCCTGGCCCGTCCTG
GGGAACATCCCGCTCTTTATGACGTCAAAGATCGAGTTCTTTCCCGACAC
CATCACCGACCTGGCCGAGCGGTACGGTGACGTCATGACCTTCTGGAACG
CCCGGGACCTGAATGTCGTCATCAGCGGGTACCGGACCATCCGTGACGTC
ATGGTGAAGAGGGCTGCAGACTTCTCCAGCCGGAAAGTTCCTCTCGTCCT
GGTGGATCTACGTGGAGATGGAAAGTCTAGATATACAACCAAAGGTATAA
TCTTCGCCCATTACGGACCTGACTGGAAGGAGCAGAGGAAATTTACCATG
AAGACCCTCCGAGACTTCGGCGTCGGCAAGCGGAGCCTGGAGGGGAAGAT
TTGTGAGGAGGCCGCAGCTCTTAGTCAGGAACTCGTGGCGAAAGACGGTC
AGCCGTTCAACATCAAGCATCTAATGCAAAACGCAGTTTCTAACATCATC
TGCTCCATCGTCTTCGGGAAGCGGTTCGAGTATGGCGACCCCGAGTTTTT
GCAGCTCAGTCACCACGTAGGCGAGCTGATAGATTCCACGCCCGGGAAGG
ACCTTCTCGTCAACATCCACCCCGTGTTTCGCCATCTTCCTTTCGGATCG
CCGGAACATGAGAAGATATCGAGGAACATTCCCAAACTCCAGACGTATTG
TAGGGGGCAGATAGAGACGCACAGGGATACCTTTGACCCTAACGACATCC
GGGACTTTATCGATGCCTTCCTGTTGGAACAACAGCACGTCGGTGGAGAG
CATGCGCAGTCCAGCTTCACAGACGAACAGCTACAAGAGCTGGTACTGGA
CCTGTTTCTAGCTGGTACGGAGACCACCGCCACCACCCTGGACTGGACCC
TACTGTACATGCTGCTGTATCCGGATATACAGGAAAAGGTGCACGGAGAG
ATCGATTCTGCCCTGGGACAGGCTGTTCCGTCCTACGCCCTCCGGGACAA
GATGCCCTACACAACAGCGACCCTAGCGGAAGTGCACCGTATCAACACTA
TTGTACCTCTCAGCATTCCCCATTCTCCATCCTCGGAGACGACTCTCAAT
GGTTATACCATCCCAGCAGGCACCAACATCTTGATGAACCTGTGGTCCGT
GCACATGAACCCTCAGCTGTTCCCGGAGCCGGACAACTTCAACCCCGACA
GGTTCCTGGATCAGGACGGAAACTTCGTCAAGCACGAGGCGCTCATCCCG
TTTTCTGTAGGTGAGTGGTGTGGGTCTTCACGTGTCAGGACGTTTTGA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| Blg00263.1-exon-Sc0000807-1570713199:13554..13933 | Blg00263.1-exon-Sc0000807-1570713199:13554..13933 | Branchiostoma lanceolatum | exon |
| Blg00263.1-exon-Sc0000807-1570713199:11853..12066 | Blg00263.1-exon-Sc0000807-1570713199:11853..12066 | Branchiostoma lanceolatum | exon |
| Blg00263.1-exon-Sc0000807-1570713199:9928..10472 | Blg00263.1-exon-Sc0000807-1570713199:9928..10472 | Branchiostoma lanceolatum | exon |
| Blg00263.1-exon-Sc0000807-1570713199:9371..9469 | Blg00263.1-exon-Sc0000807-1570713199:9371..9469 | Branchiostoma lanceolatum | exon |
| Blg00263.1-exon-Sc0000807-1570713199:8989..9183 | Blg00263.1-exon-Sc0000807-1570713199:8989..9183 | Branchiostoma lanceolatum | exon |
| Blg00263.1-exon-Sc0000807-1570713199:6235..8040 | Blg00263.1-exon-Sc0000807-1570713199:6235..8040 | Branchiostoma lanceolatum | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
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| Sc0000807 | genome | Sc0000807:6235..13933 - |
Properties
| Property Name | Value |
|---|
| GeneID | Blg00263 |
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