Blg00260.0 (mRNA) - B. lanceolatum

Overview
NameBlg00260.0
Unique NameBlg00260.0
TypemRNA
OrganismBranchiostoma lanceolatum (Amphioxus)



Sequence
The following sequences are available for this feature:

mRNA from alignment at Sc0000807:248..4435-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>Blg00260.0 ID=Blg00260.0|Name=Blg00260.0|organism=Branchiostoma lanceolatum|type=mRNA|length=4188bp|location=Sequence derived from alignment at Sc0000807:248..4435- (Branchiostoma lanceolatum)
ATGAAGGTAAAACATCCAGGTAATGAGATACGTAAGGCAACAGTTACTCA ACCAACTGGATAGATTTGAGGAGATCTTTGGACGATTTGGAAGACCTATG AAGGTTTTTCGAAGATTATGGAAGGCTTTGAAAAGTTCTTTGCAAGATAT TTGCATTTCTAAGCGGGGTTCTATTTGTCTACTAGCTGGCAGACAAAACC GTTGTAATCACCGGGTGTGACACCGGGTTCGGTAACCTCCTGGCCAGGCG GCTGGACCTGCTCGGCCTGCGGGTGTTCGCGGGCTGTCTGACCGAGGCAG GCGTGGCAGAGTTACGGCAGTCCTGCTCCGAACGGCTGCAGCCGATCCAG ATGGACGTCACCAGCTCAGACAGCGTACAAGCTACGTTCCGGGTGGTGGA GAGGGCTGTGGGGAGTAAAGGTAGGAATATTTGCCGATGGACAGAATCTT CCAGCTTCTTATCTTCTACATTCTAGTCAGATATTTTTGAACGACACATG CTATCGCCTCATTAATTGCTGATTTAGAGCCAAATAACTATGTAACTGTA AAGAATGGGGAAATTCTTTGATTCCAGTGGTTTCTATAATAAGATTTTAA TACATGTAACATGCAATTCATGGCAGGCGAAACATTAACAGATAGATACC AATTATGCTAAAAGCATAATTGCCCAATCAATGCAGAAGTGCCATAATCA TAGTTCCTTAGTGGTAAATGATGGGAGGTTCATTCTAAGACTTGTTAAAG GTGTATATCGCCATTTATAGATTATGTAAATGTAAACGTCATTTGCATAA CTTTAGATGAATTGTAAACATGTAAACAAGGATAGTGTAATTTTGATACA AAAGATAATCAATGAAAATAGATGTATCAACGAGACAGAAAATGTATAAA AAAATCCAAATTTTCATGGAGGTTAGAGGTATCCGAACTTTGTTTGATAT TGTAATTAAGCTGCGAAACATTTCTATTTTCCCTTAGCTACTTAGATTGT AGATAAATCAAGATGAACATAATCTCCTTGCATAGAAATGACGGCCTGTG GTGAGTGGCATTTTTGTAAATTTTTTGTGAGATTTACCACATTTGTAGAA GGATTGACATATCAGGTGAACTATCACCTTTTCAAGATGTCAACCCTGAC CAGACTGTAAGGTTTGGACCATCGCACGCCGGGGCATGCCCCTACTGTTT TTCGAAAGGTGTGGTGGGTTCTTTTACGTGCACGGGGTGTGACTCTCCCC TAACACGGGACCTCCATTTAACGTCATATCCGAGGGACGTCCCTAACCCT AAATGAGCTAGGTACTCATTTACACCTGATCATGAGTGAAGTGAGGAAAG TCGTGTTAAGTGCCTTTCCCAAAGGCACAACGTCGGGGAGCATGTTCAGA CATGTCTGGGAGCAGGCCGGGTTCGAACTGGGGTTCCCTTTGTTTGACAG TCGGATGTTCTATCCATTACGCCACACGACGCCACTGATAACGGCATAAT TTTCTTTTTCGTTTTTTTCCCAGGTTTGTGGGGGCTGGTGAACAATGCAG GGATTCTAGGTTCCGCGGTAGCAACCGCGGAGTGGGTAACTCTGTCCGAT TACAAGGTTTGTATAGCCAGGTTTTCTGGCGACATTCTACGGTAACTGCA GTGAAAATTCCGGTTTTGGTATCTCGTGTTTTGGACATGCTACGGCTGTG ATGTTTGAGTGGTAGATAGGAACAAAGAGGAGGTTCGGGTCCCCTAGGGG CTAGTTATGTTGTAGTCTTTGAAAGAGGATAACTCAAAAAGGGATACATG AATTATTATGATATGTGGTATGTAGATAGCTTAACCCTATCTAGACCGGC CGGGCTTTTTTGAGACTTCTTGGAGGGGGGGGGGCTCTTTCGACCCCCCC GTCATAACTTCAGAACAGTAAGCTCTATCATCACCAAATTTGCAGGGAGT GATGTTCACGTGAAGTTTTATAATTCCTGTACGTTTGGTGACATTATGAC GTAATATGACGTAATTATGACGTCATCCATGTGATTTTATTGGCTAAATA GGGAATTCCCATAATATCTAAAAGTATTAGACAAAATAGTGCGTATCATT GATTAAAAGGTATGCCAAGACATTTCACGTCAGTGGTGATTAACTTGACG TCAAAATGACGTCGAAGAATAACGTCACGTGCTATTAGCGACCCCCTGGG ATCCGCCATCTTGGATCGGCCATTTTAAAACTTTTCAAAATACAATTTTT TAATGTATGATCCCAAATAACAATCGAAATAGACTAAAAACATTAATTTG AATGATTCTGGTTCAGAAAATTCCAGGTTGTGACGAATTTAAAGGCAAAA AAGCCTGTTGCTTCCGAAAAAAACGATTTTGTCCGCCATCTTGGATTTTG AGCGATGACGTCATCAAATTAGCATAATTTATGAATGATTAATCATGACA GTTACATTAAATCACTTGTGATGTTATACATGTAGGAAACTAGTGTTGTT GAGCAAGAAAACATTGGAAACAACTATGTTTAAATCGAAATAAGCGAAAT TTGCATAAAATGCCTCTTCAGAAACCCGTTGCCATGGCAACACGAAAAAT GAAAAACTTAAACTTTTATCATAATATTGTTGCCAACTAAATTTTAGGAA AAGTCACCAAGTTTGGTTGTCCTACCATACGTCGTTTGGCAGTTATACGA TGTCAAAGTTGGCGCGGGCACTTTTAGGCCGCCCTAAACGTGAACTTGTT GGGGATGATTGACTAAATACTAAATTACTTTCTCTTTCATTCTAATTATC AGGCCGCCCTGAACGTAAACTTGTTGGGGATGATTGACTAAATACTAAAT TACTTTCTCTTTCATTCTAATCATCAGGCCGCCCTGAACGTGAACTTGTT GGGGATGATTGACTAAATACTAAATTACTTTCTCTTTCATTCTAATCATC AGGCCGCCCTGAACGTGAACTTGTTGGGGATGATTGACTAAATACTAAAT TACTTTCTCTTTCATTCTGATCATCAGGCCGCCCTGAACGTGAACTTGTT GGGGATGATTGACTAAATACTAAATTACTTTCTCTTTCATTCTGATCATC AGGCCGCCCTGAACGTGAACTTGTTGGGGATGATTGACTAAATACTAAAT TACTTTCTCTTTCATTCTGATCATCAGGCCGCCCTGAACGTGAACTTGTT GGGGATGATTGACTAAATACTAAATTACTTTCTCTTTCATTCTGATCATC AGGCCGCCCTGAACGTGAACTTGTTGGGGATGATTGACTAAATACTAAAT TACTTTCTCTTTCATTCTGATCATCAGGCCGCCCTGAACGTGAACTTGTT GGGGATGATTGACTAAATACTAAATTACTTTCTCTTTCATTCTGATCATC AGGCCGCCCTGAACGTGAACTTGTTGGGGATGATTGACTAAATACTAAAT TACTTTCTCTTTCATTCTGATCATCAGGCCGCCCTGAACGTGAACTTGTT GGGGATGATTGACTAAATACTAAATTACTTTCTCTTTCATTCTGATCATC AGGCCGCCCTGAACGTGAACTTGTTGGGGATGATTGACTAAATACTAAAT TACTTTCTCTTTCATTCTGATCATCAGGCCGCCCTGAACGTGAACTTGTT GGGGATGATTGACTAAATACTAAATTACTTTCTCTTTCATTCTAATCATC AGGCCGCCCTGAACGTGAACTTGTTGGGGATGATTGACTAAATACTAAAT TACTTTTTCTTTCATTCTGATCATCAGGCCGCCCTGAACGTGAACTTGTT GGTTATGATTGACTAAATACTAAATTACTTTCTCTTTCATTCTGATCATC AGGCCGTCCTGAACGTGAACTTGTTGGTGATGATTGACTAAATACTGAAT TACTTTCTCTTTCATTCTAATCATCAGGCCGCCCTGAATGTGAACTTGTT GGTGATGATTGACTAAATACTAAATTACTTTCTCTTTCATTCTAATCATC AGGCCGCCCTGAACGTGAACTTGTTGGGGATGATTGACGTCACCAAGACC TTTCTACCTCTTCTCAAGAAGTCACGTGGTCGTGTCGTCAACGTCGCGAG TGTCGCTGGGAGGCTGCCCTTTGTCAGCAACACACATTACTCTGTCTCTA AATACGGCGTAGAGGCGTTTTCTGACTCCCTCAGGTGA

Coding sequence (CDS) from alignment at Sc0000807:248..4435-

>Blg00260.0 ID=Blg00260.0|Name=Blg00260.0|organism=Branchiostoma lanceolatum|type=CDS|length=510bp|location=Sequence derived from alignment at Sc0000807:248..4435- (Branchiostoma lanceolatum)
ATGAAGCTGGCAGACAAAACCGTTGTAATCACCGGGTGTGACACCGGGTT
CGGTAACCTCCTGGCCAGGCGGCTGGACCTGCTCGGCCTGCGGGTGTTCG
CGGGCTGTCTGACCGAGGCAGGCGTGGCAGAGTTACGGCAGTCCTGCTCC
GAACGGCTGCAGCCGATCCAGATGGACGTCACCAGCTCAGACAGCGTACA
AGCTACGTTCCGGGTGGTGGAGAGGGCTGTGGGGAGTAAAGGTTTGTGGG
GGCTGGTGAACAATGCAGGGATTCTAGGTTCCGCGGTAGCAACCGCGGAG
TGGGTAACTCTGTCCGATTACAAGGCCGCCCTGAACGTGAACTTGTTGGG
GATGATTGACGTCACCAAGACCTTTCTACCTCTTCTCAAGAAGTCACGTG
GTCGTGTCGTCAACGTCGCGAGTGTCGCTGGGAGGCTGCCCTTTGTCAGC
AACACACATTACTCTGTCTCTAAATACGGCGTAGAGGCGTTTTCTGACTC
CCTCAGGTGA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Feature NameUnique NameSpeciesType
Blg00260.0Blg00260.0-proteinBranchiostoma lanceolatumpolypeptide
The following exon feature(s) are a part of this mRNA:
Feature NameUnique NameSpeciesType
Blg00260.0-exon-Sc0000807-1570713199:4430..4435Blg00260.0-exon-Sc0000807-1570713199:4430..4435Branchiostoma lanceolatumexon
Blg00260.0-exon-Sc0000807-1570713199:4016..4250Blg00260.0-exon-Sc0000807-1570713199:4016..4250Branchiostoma lanceolatumexon
Blg00260.0-exon-Sc0000807-1570713199:2830..2912Blg00260.0-exon-Sc0000807-1570713199:2830..2912Branchiostoma lanceolatumexon
Blg00260.0-exon-Sc0000807-1570713199:248..433Blg00260.0-exon-Sc0000807-1570713199:248..433Branchiostoma lanceolatumexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Sc0000807genomeSc0000807:248..4435 -
Properties
Property NameValue
GeneIDBlg00260