Blg00259.0 (mRNA) - B. lanceolatum

Overview
NameBlg00259.0
Unique NameBlg00259.0
TypemRNA
OrganismBranchiostoma lanceolatum (Amphioxus)



Sequence
The following sequences are available for this feature:

mRNA from alignment at Sc0000807:36099..38216-

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>Blg00259.0 ID=Blg00259.0|Name=Blg00259.0|organism=Branchiostoma lanceolatum|type=mRNA|length=2118bp|location=Sequence derived from alignment at Sc0000807:36099..38216- (Branchiostoma lanceolatum)
TCCGCTGGGCCCTGCTGTACCTGGTGAAGAACCCGGATGTACAGCGCAAG GTGCAGGATGAGATCGACACGTCACTTGGAAAACAGGTGACGTCATAAAG TAGCGCGATTGTTTGGTGGCTCAGGGTTTAAACGTTGAGGTCGTGGGTTC GAATCATTTGATTTCCGGGTCATTAAGGACTAAACAAAGTCTTTTTTTGT TTGAGAAGCGCATTATTACCGTACACTTTAACTGGTCAATATCCCTCCAG ACCCCTTCCATGCTGCTGCGAGAACACCTTCCTTACACTGAGGCGACCAT ACGTGAGGCCCAGCGGATCCGAACCATCGCTCCTTCCTCTGTTCCTCACG AGACCACGGCTCCTGCTACACTCCTGGGACATCAGGTGACCACACTGGGC TTTCTATAAAAAAAATTAACGTATTACTCCGTCGTCATGTTCTTTCTTTG ACCTTTTTTATTCCGATTTAAAACTTTCTTTAAAACTTTTCATTTTGCCT GCCATAGATCCCCTCTGGCACCTTCATACTGCCCAACCTGTGGTCTCTCC ACATGGACCCGAAGTACTGGCCCGACCCGGAGAGGTTCGACCCAACCCGT TTCCTGGACGCCGACGGGCAGCTCAAACTCAGTGTAGAGTCCTTCTTACC GTTCTGCACAGGTAAGAGAATCCTAGTTTGTATAAACATGTAGTACAAAG AAATAGTGGTTCCTATGCGGATGCACTACATAGCTGAATATATACCAAAT GCATGTGTGCCTATCTAGTGCTGCCAGCTCGGTCGACTTCTGATAAATGT TAACTCACATTCTTCGGTCTCTTTATTGTGATTGTTTGTTAAGTTCCATA TGCTGCTTTTGACAATAGAGAATAACAATGTTTGTTACCGCATGGTAACA ATACTTATAAGGGAAAAATGGTCTTTAAGCTTCCCTTGCTTTCGCACCAG GTCCCCGGAGGTGCCTCGGAGAACAGCTGGCCAAGTTCGAACTGTTCCTC TTCTTCACTTCCCTGCTGCAGCAGTTCACTTTCAAACTACCAGAGGGCGC TCCACCGCCAGACACTGAGGGAATTTTTGGGCTCGTGTTTTCTCCGCAAC CATTTCAAATTTGTGCAGTTCCGCGATATTAGACATGATCTGTTTTCGGT ACCTTTTGTTGGTGAGTAGGTGAGTAGTGTTGGGTTGTTGATTCGTGCAT CTTTATGAGATTTGGTATGTGGGTAGGGGTAGGCAAAAGAAAATACAAAT TTGATCATGGACCACCAGGCGGCTTTTTATGGTACTGCAGCCGAAGTGTC GCTTTTCATATCTCGTGTTGTGGACATGCTATGGGCTTGATATTTCGCTA GTAACTACATGCAGCTCCTGGGTTAGGTAAGAAATGACGCAATTTTATCC CACTTTTGTAAAGGGGCAATTTTATTGGAGACTTTAAAAGACAAGAACTC AATAAGTGACTGATGGATTATCAAACTTTTTAGCATGTGGTTCACTTAAA TAAAGATGAACATAATTAGGACCACATTCATATAATCAGTGAGGAAATTT TGTAATTTTGCTGCGTTCTATGAAAGGATTTTCAAACATGTGACATATGT AGCTGAGAAAGAGGGAAACATTGATACTAAGTAGATATCAATTCTGCAAA TAATGAGTGAAAATTGATGACAAAGTACTATAACGCAATGGTAATAGATT GCGGTAATGTCTTCCTTGCGTTGTTTAGAAGTCTGTTAAAGGTGAACATC CTTACACATAGATTATGCAGATCGGCTTGATTTGAATAATCAATAAGAAA ATGCTGTATTGCTAGGACAGGACTTGTATACTTGGGAGTTGGAACATATG TTTTGGGGTGAAGATGATCCTTAATCATAATCAATTATATAAATGAGAAC TTCATCAGAAATACTCGTAACGTGATAGCGGTAAATGATAGGAATTTAAT ATTTGTGCCATACTCCACTTAGGTTGAGGTTAATATCATACATTAAGTAT GAAATTTTGGGCAAGGAAGACAGGTTAGGGTCAAGATATCAGGTGATGTA TGTAGCCTTGGTTAAGGGTTTTGCTCTGAAATGATGTCTTAAGCATTAGC ACATCAAATGCCAGAGTT

Coding sequence (CDS) from alignment at Sc0000807:36099..38216-

>Blg00259.0 ID=Blg00259.0|Name=Blg00259.0|organism=Branchiostoma lanceolatum|type=CDS|length=555bp|location=Sequence derived from alignment at Sc0000807:36099..38216- (Branchiostoma lanceolatum)
CGCTGGGCCCTGCTGTACCTGGTGAAGAACCCGGATGTACAGCGCAAGGT
GCAGGATGAGATCGACACGTCACTTGGAAAACAGACCCCTTCCATGCTGC
TGCGAGAACACCTTCCTTACACTGAGGCGACCATACGTGAGGCCCAGCGG
ATCCGAACCATCGCTCCTTCCTCTGTTCCTCACGAGACCACGGCTCCTGC
TACACTCCTGGGACATCAGATCCCCTCTGGCACCTTCATACTGCCCAACC
TGTGGTCTCTCCACATGGACCCGAAGTACTGGCCCGACCCGGAGAGGTTC
GACCCAACCCGTTTCCTGGACGCCGACGGGCAGCTCAAACTCAGTGTAGA
GTCCTTCTTACCGTTCTGCACAGGTCCCCGGAGGTGCCTCGGAGAACAGC
TGGCCAAGTTCGAACTGTTCCTCTTCTTCACTTCCCTGCTGCAGCAGTTC
ACTTTCAAACTACCAGAGGGCGCTCCACCGCCAGACACTGAGGGAATTTT
TGGGCTCGTGTTTTCTCCGCAACCATTTCAAATTTGTGCAGTTCCGCGAT
ATTAG
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Feature NameUnique NameSpeciesType
Blg00259.0Blg00259.0-proteinBranchiostoma lanceolatumpolypeptide
The following exon feature(s) are a part of this mRNA:
Feature NameUnique NameSpeciesType
Blg00259.0-exon-Sc0000807-1570713199:38131..38216Blg00259.0-exon-Sc0000807-1570713199:38131..38216Branchiostoma lanceolatumexon
Blg00259.0-exon-Sc0000807-1570713199:37832..37966Blg00259.0-exon-Sc0000807-1570713199:37832..37966Branchiostoma lanceolatumexon
Blg00259.0-exon-Sc0000807-1570713199:37556..37709Blg00259.0-exon-Sc0000807-1570713199:37556..37709Branchiostoma lanceolatumexon
Blg00259.0-exon-Sc0000807-1570713199:36099..37266Blg00259.0-exon-Sc0000807-1570713199:36099..37266Branchiostoma lanceolatumexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Sc0000807genomeSc0000807:36099..38216 -
Properties
Property NameValue
GeneIDBlg00259