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Sequence
The following sequences are available for this feature:
mRNA from alignment at xfSc0000420:99..3825+ Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below. >Blg00255.0 ID=Blg00255.0|Name=Blg00255.0|organism=Branchiostoma lanceolatum|type=mRNA|length=3727bp|location=Sequence derived from alignment at xfSc0000420:99..3825+ (Branchiostoma lanceolatum)
GCCAACACACAGCTGCAAACATCCCTGACTGTGGACCCAGGGGATGAGAA
ACACCCGGTGAGGAGTCAACACAATCTACTGTTATTATTACTTCGGACAT
GTCTTCTTGTTATACGTTATCTGTGAAGTGTGATACCGGTAGGCTTTCTA
CTGAAAGTGCAATCATATCGACACAAGTAGATTTTTTCACAAGGTTCAGT
GAGAAGAACATTACTTGCCAGTGAATTGAAAAGTTCTGATGATGACAATT
AATATTACTGAAGTTTTATAGAGGACTGACCATAAGAGAACAGGGAAATT
GTAAATTAAAGGGTGCAATTTATAATTGTATGAAGCCACCGTTAAGTACA
TTTCCTGTTTTGACTGTTTTTACCTTTCTTTTTTAACAGCCTCATGTGGA
ACTTTTTGTGGCAACCACTAATGGTAAGATAGATGTTTCTGCTCATGATT
TCCAGTTTCAAAGTACTGGTATTTCGATTAGTATTGCAGCATATAATTGC
AAGCGTTGTGTTGTCAACTGACAGTAATTCCTTAGTAGAATTGTCTTTCA
TATCTTCAGCTATGTAAGCATCAGTCCTATGCGATGGTGCATTCTAATCC
CAAAGTTAAACTTTCATCTAAACAGAAAAAAAGTCCACTACTATATTATC
ATATTATCATAATATTATCCTTTTCAGTTTTAAAGAATTGCTGCCCATAA
GTATTCATTTGGCTTATGTTTTTGCAGAAACGATCCTGAGAACAGCACTC
ATATTTGCAGAGGGAATCTTTGATGGGGAAAGCCATGTGGTGTAAGACAT
CTTTTCTTTGACATTTTTCTACTGCTTGCCAATTCCTGGTGCATGACAAG
TGTAGTGAAACTGACAATGTGTTAAACACTGTCCATCTACATGTAGAACA
GGTAGTTCTTATATGAGACTTTCATTTATTGGTGAGCAATGACAGTATAT
ATGTCTTATGTTCCTATTGCAGCCATCCCACTGTGAACAACCTGTCCAGT
GAGCTGAAGGTTCCCATCAGCCCTCCTAAGGATGTTGCTGTGGACCTGCA
CATCAAGGCCTTTGTGGGCATGAAGGGCAGGTGGGTACATGTACTTACAC
AATGTGGATCTGCTGCTGAAGAGTTAAGATATTACTGCTACCAGTACCAG
CTTCAGATACTAGAAAAATCATGGTAAAAGTTTCTACTAGTATATACTTG
CTCATCAATTTTTTCTATCTTGTACTGTACTCTATTATTCATGTAGGCAA
TGGTGTTTGCCTTTGTCCCGATTCTCTGTTGCACTGTATGTAGATCAATA
TCTTGTAGCTGATATGAAAAGTTGCCTTCAACCAAACCTTTGACCCCTTA
CACTGTTACAGTACCCAGTTCCATGTCTTTGAGATCACGCGGCAGCTGCC
CAGGTTCTCCATGTACATCCCCTGCACCAAGCTTCCCCAGGAGCCACAGG
GATCCGTCACCTTCACAGTACAGGACAGAGTACAGAGGGTACGTCATTTC
TCACCTCTTGCTCTACTTCCTTGTGTAATACTGTCAACGAGTCAAGAAGT
GAAGTTGGCTAAGTACACGGGGAAGAAGTAGATGGAGGTGTCCTCATTAA
ATTAGCAGTAAAATTCTCAGATGTGCTGTAACTCTTAAAATTTTTGTGGT
ACTTAAATACATGTATGTAAAGGTGCTGATGTTTCTGACATTTCTGTATA
GTATGTGACTATACTGCTATCACGAACTTTAAACCATGGAAACACTAGTA
CTCTATTTTCTCCTTACCACGAAATTAAATCGTCACAAATCATCACAGTA
ATACCCATATCATTTATCCTATTTGTTCAATGTGATGGATTTTGATTAGA
CTGGAATAGAGTGTACATTTTGCCCATATAAGACTTAAGTCTTGCTTCTA
TTTCATACATCTTTGTACATTGATAACAGTAAAATGATAATGCTGTGGTG
TTTCTCAATGTCTAGGTTGTACTGTGGATTAATCAGAACTTCCTGTTGAC
CGATGAGTGGCCGGCGGCAGCCCCGCTCCACTTCCAGGTGGTCAGTCTGA
GAGGGACAGGAGCACTGGTCATCCACATGGAGAGCAATGGGCAGGTCAGG
GCAGGATACCAGTGTAGTCCTGAACAACTGTGGACTTTTACATGCACTTG
ATGATCTTTATATGATCAGTAACATTACGAAACGTTTAGTTTGACGCAAA
CATGAATTTTGAAAGGTGTTGCCTTATAAATATAGGTTGAAGCTATATTG
CAAAATTTGTGGAAGGTATTGAGTTAAAATGGGTAGACCTTTCTGTATAC
TCACAATTTAAGCCACGGATACAAAATCTATACTTTAATCTTTACTGTAT
TAAGTGGTTTCTTGTTTGACATGTGATTGACAGGTGACCATCAAGACAGA
TGACATGGACCTTGCAGGTGAAGTGATCCAATCCCTGGCACTGTTCCTGG
GTATTGAAGACCTGCAGGTCACCTCAGACTTCCCCGGCTACATGGAGGAG
CTCAAGAACGTTCTCATTAAGGTAGGTATTAAAATCTGTTTGATATCTCC
TGTTCTGGACATGCTATGGTCTTGATTTGTCAAGTGTAGATAGGTCTTTG
GTTCGAGAAGCTGTGGCGTAGCTATAGGTTTAGGCCCCCTAGCACCTTTT
TTTAACTGCAGGGGCAGCTTTTCTACAGTTAACCGTGGATGGAAATAACC
CTGTGATCTACCTGAACAGGTGGATGAGTTCAGCTCAGTGAGACAGAAGC
TGACGGCTGAGATGGCTGACCACTCCAACCTGATCCGCAGCATGGTGGTC
AGGGCAGAGGACGCCAGGATTCTGGCTGACTGGTTAGTTTTTCATGTTGA
TGTGCTGATGCGTTAGTCTTGTTCTGGTTTAGGTTTCCTTGGTTGATTTT
TGACAACCTGTGAAGTCTTTTATTGTGTGCTCTTCAAAGCCAACAATGAG
GATATTAAAAAAAAATTGTCAAGTTTGTTTATGAAGATTTTGCAAGAAGA
ATTTGCATAATCCAAATAGCTTTTAATCATTTTCTCTATGTAAACGTGGC
ACTTAATTTGTGAGCCGACAATAACTTGATTATGTTATACAACTAAGTTG
CAGAATATCACCTCTTACAATTGTGACATTTACAGGAAGAACATGAGGAA
GTACTACATGGAGCTGTTTGACCTAAACAGGGACCTGGTCAACGGGTACA
AGATCCGCTGTAACAACCACACCGAGCTGCTGTCCTGTCTCAAACTGGTC
AACCAGGCCATCCAGAGGGCAGGCAGGCTCAGAGGTATCCAAAAGATGTT
AACTCCTAAGCTGTGTATTTGTTTGAAGTACGGTTTGAATTAGGCAACAG
GTACAATTGACTATATTTTGGTTATTTAACCCCATATGTAGTTGGTTGTC
AATGATTTAGCATTCAAAAATTTTGCCAGACAGTATTTGTTTGGTAATGG
TTTGGATCAGACACTAAGTACTTTCGACTACTGAGTATTTTGTTTCTTTG
TTTATTTATTCAACCTCATATGTAGTTAGTTTTCAATGATGTAGCATTCA
AAATTTTGCCTGCCAATTTTGATTTTTGTATGAGAGATGAGAGATCTGTA
TTAACAAGCTTTCCTTTCTCTTCCAGTCGGTCGACCCAAGACAGTTGTGG
TGAACGCATGCAGGGAAGCCTTCAAGACTCACAACATTGATGCCCTCTTC
AAAATTATGAAAGTCGGAGCAATGTGA Coding sequence (CDS) from alignment at xfSc0000420:99..3825+ >Blg00255.0 ID=Blg00255.0|Name=Blg00255.0|organism=Branchiostoma lanceolatum|type=CDS|length=1020bp|location=Sequence derived from alignment at xfSc0000420:99..3825+ (Branchiostoma lanceolatum)
GCCAACACACAGCTGCAAACATCCCTGACTGTGGACCCAGGGGATGAGAA
ACACCCGCCTCATGTGGAACTTTTTGTGGCAACCACTAATGAAACGATCC
TGAGAACAGCACTCATATTTGCAGAGGGAATCTTTGATGGGGAAAGCCAT
GTGGTCCATCCCACTGTGAACAACCTGTCCAGTGAGCTGAAGGTTCCCAT
CAGCCCTCCTAAGGATGTTGCTGTGGACCTGCACATCAAGGCCTTTGTGG
GCATGAAGGGCAGTACCCAGTTCCATGTCTTTGAGATCACGCGGCAGCTG
CCCAGGTTCTCCATGTACATCCCCTGCACCAAGCTTCCCCAGGAGCCACA
GGGATCCGTCACCTTCACAGTACAGGACAGAGTACAGAGGGTTGTACTGT
GGATTAATCAGAACTTCCTGTTGACCGATGAGTGGCCGGCGGCAGCCCCG
CTCCACTTCCAGGTGGTCAGTCTGAGAGGGACAGGAGCACTGGTCATCCA
CATGGAGAGCAATGGGCAGGTGACCATCAAGACAGATGACATGGACCTTG
CAGGTGAAGTGATCCAATCCCTGGCACTGTTCCTGGGTATTGAAGACCTG
CAGGTCACCTCAGACTTCCCCGGCTACATGGAGGAGCTCAAGAACGTTCT
CATTAAGGTGGATGAGTTCAGCTCAGTGAGACAGAAGCTGACGGCTGAGA
TGGCTGACCACTCCAACCTGATCCGCAGCATGGTGGTCAGGGCAGAGGAC
GCCAGGATTCTGGCTGACTGGAAGAACATGAGGAAGTACTACATGGAGCT
GTTTGACCTAAACAGGGACCTGGTCAACGGGTACAAGATCCGCTGTAACA
ACCACACCGAGCTGCTGTCCTGTCTCAAACTGGTCAACCAGGCCATCCAG
AGGGCAGGCAGGCTCAGAGTCGGTCGACCCAAGACAGTTGTGGTGAACGC
ATGCAGGGAAGCCTTCAAGACTCACAACATTGATGCCCTCTTCAAAATTA
TGAAAGTCGGAGCAATGTGA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| Blg00255.0-exon-xfSc0000420-1570713199:99..155 | Blg00255.0-exon-xfSc0000420-1570713199:99..155 | Branchiostoma lanceolatum | exon |
| Blg00255.0-exon-xfSc0000420-1570713199:488..521 | Blg00255.0-exon-xfSc0000420-1570713199:488..521 | Branchiostoma lanceolatum | exon |
| Blg00255.0-exon-xfSc0000420-1570713199:826..889 | Blg00255.0-exon-xfSc0000420-1570713199:826..889 | Branchiostoma lanceolatum | exon |
| Blg00255.0-exon-xfSc0000420-1570713199:1071..1178 | Blg00255.0-exon-xfSc0000420-1570713199:1071..1178 | Branchiostoma lanceolatum | exon |
| Blg00255.0-exon-xfSc0000420-1570713199:1460..1586 | Blg00255.0-exon-xfSc0000420-1570713199:1460..1586 | Branchiostoma lanceolatum | exon |
| Blg00255.0-exon-xfSc0000420-1570713199:2064..2192 | Blg00255.0-exon-xfSc0000420-1570713199:2064..2192 | Branchiostoma lanceolatum | exon |
| Blg00255.0-exon-xfSc0000420-1570713199:2482..2619 | Blg00255.0-exon-xfSc0000420-1570713199:2482..2619 | Branchiostoma lanceolatum | exon |
| Blg00255.0-exon-xfSc0000420-1570713199:2818..2930 | Blg00255.0-exon-xfSc0000420-1570713199:2818..2930 | Branchiostoma lanceolatum | exon |
| Blg00255.0-exon-xfSc0000420-1570713199:3234..3382 | Blg00255.0-exon-xfSc0000420-1570713199:3234..3382 | Branchiostoma lanceolatum | exon |
| Blg00255.0-exon-xfSc0000420-1570713199:3725..3825 | Blg00255.0-exon-xfSc0000420-1570713199:3725..3825 | Branchiostoma lanceolatum | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| xfSc0000420 | genome | xfSc0000420:99..3825 + |
Properties
| Property Name | Value |
|---|
| GeneID | Blg00255 |
|
