Blg00245.0 (mRNA) - B. lanceolatum

Overview
NameBlg00245.0
Unique NameBlg00245.0
TypemRNA
OrganismBranchiostoma lanceolatum (Amphioxus)



Sequence
The following sequences are available for this feature:

mRNA from alignment at Sc0000151:554370..556451-

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>Blg00245.0 ID=Blg00245.0|Name=Blg00245.0|organism=Branchiostoma lanceolatum|type=mRNA|length=2082bp|location=Sequence derived from alignment at Sc0000151:554370..556451- (Branchiostoma lanceolatum)
ACCATATTTTCAACCATCCCTGATAGAAATTGTATTAATCAAATAGGATA ATGCACTAATTTGATTTTTCGTCATTTGATTGCATTTACGACAAATCAAA AGCTTTATGTATGGCGTGGTAGAGTTGATAAATGTAACTGTTACTGCTTT TCTCCTACAGAAAAATAGACGCACGGTGATAAAGGAATACCATTTCGAGA TGGATGAATGGAACTTTGACGGTGCAACGGACGAGGTTAAGTGAATTTCA AAGTGGCCTTGGTCACAGTCATATGTCTCTCAGTCTCAGTCAGGCAGTTA TGGCGTTATTGTAAAATTCACTTCAATATAGCAATTCCCCTTTTCCCGCG GTACTGGTAGTGTTGGTAAACCACCTAGTTCATTAGCGCAAGCCGAGGAT TTTTACCCTTCCTGTTCATATAAAGATGCTACTATAGAGCGCTATAGACT CTTACAATGTTATCACAAAATCCACAGATGCTAGTATGGTGCCCAACACT TAGCAGCACCATTAGTATCACGACCGTTAAGAAAGCCATCAAGAAGAGTG TATCGAACTGCAGGAACAAACAGAAAACAAGGTAAATGCAATCATTAGTA TGCGTGATTATCTGATTTGTACTTAAGCATCTTATAGAGTATTTGACTTC TCAGTAATGTTACGGTCGCAATTGCTTACCTCCCGGTGCTCTAACGATTA GTAGGGTACCTGTTCAGCAGCGCTTCAATAAATTATTTGTGAACATATCT ATGGAAATTACCTTACTGTGTGGCTTTGTATTTTCATTCAGGTACGTGAA ATCCATGGGGGCAAACAAAAAGCGATTGTTCGAGAGAGGGAGGATTAGGG CCGTCCCCACCGATGACAACCAGTCCGATCGGCACGGGACAGACACGACC TTGGCTGTCGAGGCCGTCTCCACCGCTGATGACAACAAGCCGATCGGCAC GGGACAGACACGACCTCGGTTGTCGAGGCTGTCTCCACTAAAGAATCGTC GGTACGAAACTAGGAGAACGACTTAAAGGTGTCAGCCTCTCTTGGTATGT AAATTTGTCATTTTATTGCCAGCGCCAACCGGTCGAGTTTGAATCAAATT TCATCCAGAATTGATTAATTAAAAGTGAATGTGATGGGCCTAATGAGAAT TTCCTCCTGTTTCAGTGACTGCCCACAGAGGTAATCTAGCAGGATCTCCA TTTGGTTGCATTGTGTATAAAAGAAATATTGCGTTTAAATGATAGGCAAC TTTAAATGTTTTCTGGCACCGCGTATGGCCAACGTGAAGCCGGCAAAGGC GAATTCAAATCTTCCAATTTATGCAGACCTTCGAAGTCTCTGCAAATAAT AATAATTGTGAATAATGTTTTTTTCTGTGTGCAAGTTTCCAAATGTGTTT AACAGTGAGAGTAGAAGTTGTTCTTACTGAAGAGGGTAACAAATCATTTT TGTTCTCTCAGGTGCGTTTTGGCAGCGCACCATCCACAAGACACCACCGC ATTGGAATTCGACTTAGAGGATTGGCACCTCCAAGGAGGATCAGTTTTTC ATCATTGACCAAACCAGAGTCAAGCCGAATCTCCAAGGACTGTTTTAGTT CTATAACAACTCAGCGCGCAGGATGTCCAGCCCAAACCAAGATCCAGGTA TGCTGTGAATTCAAGTCTATCCGTGATACTATATATAGTAACAAAATTAG CTACAACTCTGAGATTTCTATGAAAATGACAAAGAAGCAAGTTTAAACGT AACAAAACGTTAAGAATTCACTGTATAAAAAGTATATTATATTATAACTT CAGGACATGCTAGATATAATCAGGACTGGGATGAAGAACGCTGTAAACAC AAGTTGGCTCTGTCACTGAGACATGGAATGCCATTTACAGGTGCCTGACC GCCGTACCACTTAACCTGAATCGCAAGGCAAACAATGTGACAGCGTTTTG CCTCTCCTGGATTTGCAGAAGGACTACCATACTCTGCTGGCCATCCTCTA TCTCCTCTGTGACCTGCTACCGCATATATCTGCACTCTCCAGCAGGCAAA CATCGGTTTGCTGCAGATACACCGCAGTGTGC

Coding sequence (CDS) from alignment at Sc0000151:554370..556451-

>Blg00245.0 ID=Blg00245.0|Name=Blg00245.0|organism=Branchiostoma lanceolatum|type=CDS|length=468bp|location=Sequence derived from alignment at Sc0000151:554370..556451- (Branchiostoma lanceolatum)
ATGTATGGCGTGGTAGAGTTGATAAATGTAACTGTTACTGCTTTTCTCCT
ACAGAAAAATAGACGCACGGTGATAAAGGAATACCATTTCGAGATGGATG
AATGGAACTTTGACGGTGCAACGGACGAGATGCTAGTATGGTGCCCAACA
CTTAGCAGCACCATTAGTATCACGACCGTTAAGAAAGCCATCAAGAAGAG
TGTATCGAACTGCAGGAACAAACAGAAAACAAGGTACGTGAAATCCATGG
GGGCAAACAAAAAGCGATTGTTCGAGAGAGGGAGGATTAGGGCCGTCCCC
ACCGATGACAACCAGTCCGATCGGCACGGGACAGACACGACCTTGGCTGT
CGAGGCCGTCTCCACCGCTGATGACAACAAGCCGATCGGCACGGGACAGA
CACGACCTCGGTTGTCGAGGCTGTCTCCACTAAAGAATCGTCGGTACGAA
ACTAGGAGAACGACTTAA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Feature NameUnique NameSpeciesType
Blg00245.0Blg00245.0-proteinBranchiostoma lanceolatumpolypeptide
The following exon feature(s) are a part of this mRNA:
Feature NameUnique NameSpeciesType
Blg00245.0-exon-Sc0000151-1570713199:556217..556451Blg00245.0-exon-Sc0000151-1570713199:556217..556451Branchiostoma lanceolatumexon
Blg00245.0-exon-Sc0000151-1570713199:555871..555974Blg00245.0-exon-Sc0000151-1570713199:555871..555974Branchiostoma lanceolatumexon
Blg00245.0-exon-Sc0000151-1570713199:555408..555660Blg00245.0-exon-Sc0000151-1570713199:555408..555660Branchiostoma lanceolatumexon
Blg00245.0-exon-Sc0000151-1570713199:554805..554990Blg00245.0-exon-Sc0000151-1570713199:554805..554990Branchiostoma lanceolatumexon
Blg00245.0-exon-Sc0000151-1570713199:554370..554561Blg00245.0-exon-Sc0000151-1570713199:554370..554561Branchiostoma lanceolatumexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Sc0000151genomeSc0000151:554370..556451 -
Properties
Property NameValue
GeneIDBlg00245