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Blg00234.0 (mRNA) - B. lanceolatum

Overview
NameBlg00234.0
Unique NameBlg00234.0
TypemRNA
OrganismBranchiostoma lanceolatum (Amphioxus)



Sequence
The following sequences are available for this feature:

mRNA from alignment at Sc0000151:438462..441381-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>Blg00234.0 ID=Blg00234.0|Name=Blg00234.0|organism=Branchiostoma lanceolatum|type=mRNA|length=2920bp|location=Sequence derived from alignment at Sc0000151:438462..441381- (Branchiostoma lanceolatum)
ATGAAAATCCATTTTCGTTACGAGTGTACCGGCCATGACCTTGCTTCTCG ACGGGTGTGTACGCCCGAGAGCAAGCCCTTAGCAGGGAGGAGATTGTCCG ACGCCCCTCGGTACGGTAAAGTCTCCCCAGTAGGGGAACAACTTCCCCTG AACACTTGCCAAGCGCCGTCGCTGATACTTCTTCAGTCTCTTGAATGACA CCTGCTGGAGCTGGAGACTGAAAAAGTCCGCCTCCTTCTTCAGTAAGTGT ACCAACAGGGGCAGGTGGACTCGGTTGGCCTTCTGCTTCTGGTGTGATCA TTCGTACGTACTGTCTTAATGAAAATCACCCACACGAGGGGAAGGTGCTA TTTTGCAATTTTTTTTCCGTCAGGTACTCCCCTAGAAACAGGGAGACAGT TCATCCGAATGTTAAAGCGTAAAAACATTACCTTGATGGAAACTTTGCCT AAATGCAACTCATACGGACTTAAATATACCCACAAGTGTGAACGTGGCCC TAAGCCACAAGCTTGACCAACTGAGGCAATGGGAAAAGCAGGAGTTTAGA AGGCTGCTCGTGAATAACCCCCACCCAATTTGGATTGAAATTTAAATGTT TTTTTTATCCACTCATCCATCCGGGATGGACCCCCTTCTTTTTTCGATGA CTTCGGTGGGTTCTGTAACATGCTCGACATGTGTCTCTTCTCAAACATGG GACCTCAAGCGCCATTCAATGTCTTTTATATACCGAGGTGACGTCCTAAA AGCATAGCTGCGAAATCTGAAACATAGGAAATGGCAACAGTATTTAAAGG ATATAATCAACCACAAAGTACCGATGGAATGGATAGAAATGGACTATTCT CGTCCAGAAAGCGTTGGTTTCTTGCTCTGATGGGTCCATTGAGGAGGTGA GGCTGCAGAAGGGGATGCACATTGGCAGGATTAGGAGCGGTTGGAGCATC TGTACAGGTGGGGCGGGCTGTATGGCAGGCTAGGTCTGGACTGGCAGGAT GATTGACCGTATGATGGCGACTTGATGTGGGAGGGCGGGCTAATTTGCGT GCAGTGGTGCGGCGTTGTTGGCAGCGGGGCGAGCTGGGGTGGGCGTTGGC AGGGTGGTTGGCCGGATTGATGGGCTGGCTAAGGCATTCATGGCAGGACA GGCGGGGCTGGGGCATTGGGAGGTGGCTGGACTGGGGCATTGGGAGGTGG CTGGACTGGGGCATTGGGAGGTGGCTGGACTGGGGCATTGGGAGGTGGCT GGGTTGACATGCTGGGCTGGGGAATTGAGTCATTCCAGATGCATACCGAT CCAAGTTCTCTGGAAGCCACCTTGCCACGTTAGTGTATTTGCATCGAGGA ATTTTTATCGTCGCAACTTGAAATCCTGTAGAAGTGTCAGTTTCGTCTGC CCCTCTCCTGACTTCCCGGAAAACTTTGGCTTCAGATTGAATTGAAGTAC GGTTTCTCATGATTTGGAAGCGATCTATGATCTGTTAAGCTGTTTGCATG TACAAGGGAAGTCTTTCAATCAATCCATCCATCAATCAAAAATGGTTTAT TCTTCAAAAGACCTGGCAGCACTACATGTACGTATGTAGGTTTAATTGCA AATCGTCATCATTAGAACCATACCTATCTTACCTATTATTGCACTTATTA CTAAATAAGCCGTATTAGCTTGTAAAAGTATTGCTACATTTAAATCCGCG TTTTTTAAATATATTTATTGATATTCGAAATAATAAAAACAATTCAAAGC AGGAAGTTCAGAATTTGGAGTTAAGTTTATCAAGTCATAAACTTAGGCGT CAGTCCTATTGAAGAGGCCACATCCTACAACCAAGTATCCTTCTTTAGCT TGTTTATGTAGTCTGGGGTCGTTATATCATAGAAAACCGCAATCCGTTTG TCTTGCTCTTCAGTGAGCCGACCTTCAGTGTTGCTGGCTATCAACACCAG ATGTCACCCCCCCCCCCTCGTGTCACTCTTCTCACTTCCAGTAGATTCTA TTGCGTCATCCATCTATTTTTCTTTCTCTGTCTACCAAGTCTTTTTGATA ATGACAATGGTTGTTTCGGTAATGTTTCCCCTTCTCTTTCTTCTCCGTTT TCTTTCCTTTTTGGTATGATGAAGAAATTCACGAGAGCTTAGAAACACGC AATATAATGTTAGGGGCTTTGCTCACACCTAATCTGTGACGTCAGACATT TGACCCTTTCTTACGACGTACACAGCTTTATTCTTTTAACTTTGTGTACT CGTTGTCCAAAAGAGATGATTTTTTTTCAACTTTTTTTTTGTTGCTAATC ACACTCTCCCATAACGGTGTGTTGTGCCACACGATAAACTCACAAGGCGC GCACGGAGCCTAAGTCAGAGAAGTGCCATTGCCTTGGGTCTTCGTCTCAT ATCAGATGCAACAGACGAGTCATAAACCACACATTATATCGTACATGTAC TTGCCTTTATATCAAGAACCAAAATTCAATCAATCAACTGCACACTTCAA CAACAAGTACTTAGTGTTCAACAGCTACAAGATCAATTTGTTAGCTCGCT TCCTATATCTTCGGGGTCGGACGTCTGTAATCTTTGGTGTTGGTGTGGCC CTATTGTTGGCTCGCTTTGGGAGTGGCGGGGTGAGGGCCGGCCCTGGTAG TAACACTGGGGTTGTCATCGGGGTGGTGACCGTCACTGATCATGACGGCG GGGCGGTAGTACTTGCTGGTCGCTTCCCATTGTTAGGTTGCCTTTATGAT ATTCCTTTTACGAATCTGCCTTCCAGATAGTGTGCCGGCGGGCGTCTGCG GAAGGTCGGCGGTCGTCTCTGGTGGTGACGCAGGAGTTATATATCGAGTG CCGGGGCGGGGACCGGTCGTGGTACCATGGTGGTGACACGGGGCCGGTCT CTGGTACGAAACGAAATTGA

Coding sequence (CDS) from alignment at Sc0000151:438462..441381-

>Blg00234.0 ID=Blg00234.0|Name=Blg00234.0|organism=Branchiostoma lanceolatum|type=CDS|length=444bp|location=Sequence derived from alignment at Sc0000151:438462..441381- (Branchiostoma lanceolatum)
ATGAAAATCCATTTTCGTTACGAGTGTACCGGCCATGACCTTGCTTCTCG
ACGGGTGTGTACGCCCGAGAGCAAGCCCTTAGCAGGGAGGAGATTGTCCG
ACGCCCCTCGTGGTGCGGCGTTGTTGGCAGCGGGGCGAGCTGGGGTGGGC
GTTGGCAGGGTGGTTGGCCGGATTGATGGGCTGGCTAAGGCATTCATGGC
AGGACAGGCGGGGCTGGGGCATTGGGAGGTGGCTGGACTGGGGCATTGGG
AGGTGGCTGGACTGGGGCATTGGGAGGTGGCTGGACTGGGGCATTGGGAG
ATAGTGTGCCGGCGGGCGTCTGCGGAAGGTCGGCGGTCGTCTCTGGTGGT
GACGCAGGAGTTATATATCGAGTGCCGGGGCGGGGACCGGTCGTGGTACC
ATGGTGGTGACACGGGGCCGGTCTCTGGTACGAAACGAAATTGA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Feature NameUnique NameSpeciesType
Blg00234.0Blg00234.0-proteinBranchiostoma lanceolatumpolypeptide
The following exon feature(s) are a part of this mRNA:
Feature NameUnique NameSpeciesType
Blg00234.0-exon-Sc0000151-1570713199:441272..441381Blg00234.0-exon-Sc0000151-1570713199:441272..441381Branchiostoma lanceolatumexon
Blg00234.0-exon-Sc0000151-1570713199:440138..440327Blg00234.0-exon-Sc0000151-1570713199:440138..440327Branchiostoma lanceolatumexon
Blg00234.0-exon-Sc0000151-1570713199:438462..438605Blg00234.0-exon-Sc0000151-1570713199:438462..438605Branchiostoma lanceolatumexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Sc0000151genomeSc0000151:438462..441381 -
Properties
Property NameValue
GeneIDBlg00234