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Blg00221.0 (mRNA) - B. lanceolatum

Overview
NameBlg00221.0
Unique NameBlg00221.0
TypemRNA
OrganismBranchiostoma lanceolatum (Amphioxus)



Sequence
The following sequences are available for this feature:

mRNA from alignment at Sc0000151:543002..545573-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>Blg00221.0 ID=Blg00221.0|Name=Blg00221.0|organism=Branchiostoma lanceolatum|type=mRNA|length=2572bp|location=Sequence derived from alignment at Sc0000151:543002..545573- (Branchiostoma lanceolatum)
ATGCGGGCAAATAACAACAATGCCCACATCTGGCTAGCAGGGGACTTCAA CTTGCCAGATGCGACCTGGAACCCCGAAGCAAATACCATCGCCCCTAACC CATCCAGTCTCACGAGCAAGTACATCAGCCTTGCCAATGACTGCGGTCTG GAACAAATGGTCTGCGAACCAACTCACACTGTAGGGCAAACTTCGAACAC CCTGGATCTGTTTCTCACCACAAATTCCACCTTAGTGGAGAGAGTCAAAA TCTTGCCAGGTCTCAGCGATCATGACATCCCGCTGATTGACGTTCAAGTA AAGCCCCAAACATCAAACACGAAAGACCGACTCATATACCTGTGGAGGAA AGCCAACATCGATGCACTCCAGCAGGATATGGTAACATACAGTCGTGAGT TCGCAGACCAAGTACAGNCATATACCTGTGGAGGAAAGCCAACATCGATG CACTCCAGCAGGATATGGTAACATACAGTCGTGAGTTCGCAGACCAAGCA CAGCATAATACTGCCTCAGAAAACTGGGAGCTGTTTAAGGCAGCCGTTAG TGGTGCTGCCAATAAGCATGTTCCCAGGAAACGAGTGAGGCCACAATCTA GCAAACCTTGGATAACACCCCAGATTCGCAAAGCATTTCGTAAGCGGTCT GAACTTTTTTCCAAGGCTAGGAGATCCAACTCCCATGAAGCCTGGGCAAA GTTCAAGAGGTGTAGGAAGGGAGTTAAGCAGAGAGTTAGGAAGGCCCATA GGGATTATGTTTCCAACTACCTTGAGACAAACATCGAGGATAATCCCAAG GCCTTTTGGAGCTATGTCAAATCTCTCAGACAGGACTCTACTGGTGCATC GGCCATAAGACACCAGGGGGTGCTAACATCTGACCCCCAGGAAAAGGCTG ATGCACTGGGAGCCCAGTTTGAGTCAGTGTTTACCAGGGAGGATAAATCT ACCGTTCCTACCCTTGGCGAGTCCGAAATTCCAACTATCCCCTCCCTTAA CATCTCAGTGGAGGGGGTAGCCAAACAGCTCTCTAGTCTTAATCCCAGCA AGTCCACAGGACCAGACGGAATACCACCTCGCCTCCTGAAAACTGTTGCC GAGCAAATTGCGCCAATACTACAGACAATATTCTCCCAATCAATATCTAC GGGAGACGTACCTGAGGATTGGAGAACAGCTAACATCGCTCCAATCTTCA AAAAGGGTGACAGAACAATGCCTTCCAACTATAGGCCGGTGTCTTTGACA TCGGTCTGTGGCAAAGTGCTTGAACACATCGTGCACAGCCACATGATGAA ACATCTTGACACTCATGGCGTTCTGTCCCCGGCGCAGCACGGTTTCAGGA AGGGTCTGTCCTGTGAGAGCCAGCTGATACTCACCNTCTGTCCCCGGCGC AGCACGGTTTCAGGAAGGGTCTGTCCTGTGAGAGCCAGCTGGTACTCACC CTCCAAGACTTGGCCAACAATCTTGACCATAACAAACAGGTCGATGTCGC GGTGCTTGACTTTAGCAAGGCATTCGACACCGTGCCCCACGAGCGGCTGC TAAGCAAGCTCGAGCACTACGGCATTTCTGACCTTCTTCAGTCTTGGTTT AGGGCCTTCCTAACAGAGAGAACCCAGAGGGTTGTCTTTGACGGCGGAAC ATCTAAAGCTGTCAGGGTCACCTCTGGAGTCCCTCAGGGTACAGTGTTAG GCCCTTTGCTCTTTCTACTGTACATTAACGACCTCCCCAGCTCCGTAGAT TCACACGTTCGATTATTTGCCGACGATTGCTTGATTTATCGAACTATCAG CACGCCTTCTGACGCACAAGGTCTACAGTCTGATCCAGATGCGCTAACAG ATTGGCAAAATCGTTGGCTTATGTCGTTCAATCCCTCTAAATGCCACATC CTCCATATCACCCGTAAAAAGCACCCCATCCTAACCCAGTACTCCCTAAG TGGAGAAGCCCTCACCGGTGTCAAGTCCCACCCCTATCTTGGAGTACAAC TGTCCGACGATCTGCGGTGGGACACCCATATCAACTACGCCACTAGCAAA GCCGGCAGGGTACTAGGGGTCATTCGGCGCAATTTGACCCATTGTCCATC TAGGGTCAAGGCCACTTGTTACAAAGCGCTGGTGCGGCCCCACTTGGAAT ATAGTGCCACCGTCTGGGACCCGTACACCACCAAAGGGATACAGGCGGTG GAGGCCGTCCAGCGCAGGGCCGCCCGAGTGACTCTGAATGACTACCGGCA GACTAGCAGCGTGACACAAATGCTCAATGACCTGCAGTGGACCCTTCTCT CTGAAAGGAGGAGGAACGCCCGCCTCACCTTTTTCTATAAGCTAGTTAAT AACCACATCAATATTAATACAGATAGTCTACTGAAACCAGCTCAGGGGCG CACCCGGGGAAGCCACACGCTCAAATTTCAACCACTTTACGCCCGAACAG ACTCTTACAAATATTCATACTTCCCCCGCACCATACCCGAGTGGAACGCC CTGCCTGGCGCGGTTGTTACGGCTCCCACCGTTGAGTCTTTCCGCGCCAG GCTGGAGGCCTGCCCGCCTTAG

Coding sequence (CDS) from alignment at Sc0000151:543002..545573-

>Blg00221.0 ID=Blg00221.0|Name=Blg00221.0|organism=Branchiostoma lanceolatum|type=CDS|length=1812bp|location=Sequence derived from alignment at Sc0000151:543002..545573- (Branchiostoma lanceolatum)
ATGCGGGCAAATAACAACAATGCCCACATCTGGCTAGCAGGGGACTTCAA
CTTGCCAGATGCGACCTGGAACCCCGAAGCAAATACCATCGCCCCTAACC
CATCCAGTCTCACGAGCAAGTACATCAGCCTTGCCAATGACTGCGGTCTG
GAACAAATGGTCTGCGAACCAACTCACACTGTAGGGCAAACTTCGAACAC
CCTGGATCTGTTTCTCACCACAAATTCCACCTTAGTGGAGAGAGTCAAAA
TCTTGCCAGGTCTCAGCGATCATGACATCCCGCTGATTGACGTTCAAGTA
AAGCCCCAAACATCAAACACGAAAGACCGACTCATATACCTGTGGAGGAA
AGCCAACATCGATGCACTCCAGCAGGATATGGCTAGGAGATCCAACTCCC
ATGAAGCCTGGGCAAAGTTCAAGAGGTGTAGGAAGGGAGTTAAGCAGAGA
GTTAGGAAGGCCCATAGGGATTATGTTTCCAACTACCTTGAGACAAACAT
CGAGGATAATCCCAAGGCCTTTTGGAGCTATGTCAAATCTCTCAGACAGG
ACTCTACTGGTGCATCGGCCATAAGACACCAGGGGGTGCTAACATCTGAC
CCCCAGGAAAAGGCTGATGCACTGGGAGCCCAGTTTGAGTCACACGGTTT
CAGGAAGGGTCTGTCCTGTGAGAGCCAGCTGGTACTCACCCTCCAAGACT
TGGCCAACAATCTTGACCATAACAAACAGGTCGATGTCGCGGTGCTTGAC
TTTAGCAAGGCATTCGACACCGTGCCCCACGAGCGGCTGCTAAGCAAGCT
CGAGCACTACGGCATTTCTGACCTTCTTCAGTCTTGGTTTAGGGCCTTCC
TAACAGAGAGAACCCAGAGGGTTGTCTTTGACGGCGGAACATCTAAAGCT
GTCAGGGTCACCTCTGGAGTCCCTCAGGGTACAGTGTTAGGCCCTTTGCT
CTTTCTACTGTACATTAACGACCTCCCCAGCTCCGTAGATTCACACGTTC
GATTATTTGCCGACGATTGCTTGATTTATCGAACTATCAGCACGCCTTCT
GACGCACAAGGTCTACAGTCTGATCCAGATGCGCTAACAGATTGGCAAAA
TCGTTGGCTTATGTCGTTCAATCCCTCTAAATGCCACATCCTCCATATCA
CCCGTAAAAAGCACCCCATCCTAACCCAGTACTCCCTAAGTGGAGAAGCC
CTCACCGGTGTCAAGTCCCACCCCTATCTTGGAGTACAACTGTCCGACGA
TCTGCGGTGGGACACCCATATCAACTACGCCACTAGCAAAGCCGGCAGGG
TACTAGGGGTCATTCGGCGCAATTTGACCCATTGTCCATCTAGGGTCAAG
GCCACTTGTTACAAAGCGCTGGTGCGGCCCCACTTGGAATATAGTGCCAC
CGTCTGGGACCCGTACACCACCAAAGGGATACAGGCGGTGGAGGCCGTCC
AGCGCAGGGCCGCCCGAGTGACTCTGAATGACTACCGGCAGACTAGCAGC
GTGACACAAATGCTCAATGACCTGCAGTGGACCCTTCTCTCTGAAAGGAG
GAGGAACGCCCGCCTCACCTTTTTCTATAAGCTAGTTAATAACCACATCA
ATATTAATACAGATAGTCTACTGAAACCAGCTCAGGGGCGCACCCGGGGA
AGCCACACGCTCAAATTTCAACCACTTTACGCCCGAACAGACTCTTACAA
ATATTCATACTTCCCCCGCACCATACCCGAGTGGAACGCCCTGCCTGGCG
CGGTTGTTACGGCTCCCACCGTTGAGTCTTTCCGCGCCAGGCTGGAGGCC
TGCCCGCCTTAG
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Feature NameUnique NameSpeciesType
Blg00221.0Blg00221.0-proteinBranchiostoma lanceolatumpolypeptide
The following exon feature(s) are a part of this mRNA:
Feature NameUnique NameSpeciesType
Blg00221.0-exon-Sc0000151-1570713199:545193..545573Blg00221.0-exon-Sc0000151-1570713199:545193..545573Branchiostoma lanceolatumexon
Blg00221.0-exon-Sc0000151-1570713199:544648..544908Blg00221.0-exon-Sc0000151-1570713199:544648..544908Branchiostoma lanceolatumexon
Blg00221.0-exon-Sc0000151-1570713199:543002..544171Blg00221.0-exon-Sc0000151-1570713199:543002..544171Branchiostoma lanceolatumexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Sc0000151genomeSc0000151:543002..545573 -
Properties
Property NameValue
GeneIDBlg00221