Blg00218.0 (mRNA) - B. lanceolatum

Overview
NameBlg00218.0
Unique NameBlg00218.0
TypemRNA
OrganismBranchiostoma lanceolatum (Amphioxus)



Sequence
The following sequences are available for this feature:

mRNA from alignment at Sc0000151:634018..638184+

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>Blg00218.0 ID=Blg00218.0|Name=Blg00218.0|organism=Branchiostoma lanceolatum|type=mRNA|length=4167bp|location=Sequence derived from alignment at Sc0000151:634018..638184+ (Branchiostoma lanceolatum)
ATGGTACCTGACTCTGTGTACAAGACCTGCACGGAGCAGACGAACAAGTA TGCCCGTGACTACTTTGAAGAACATCCAAAGGAGACTCACGGTGGAAGCT CACGGATGCGTGAGTGGCCAGACGAGGGCATCTCCGAGTCTGACATGAAG GTTTTCTTGGCTCTGACAATCGCAATGGGCTTCATCCATCAAGACGTATC CGACTACTGGAGCACTGACGAACTCCTTCAAACACCATTCTTCCCAGACA TCATGACCAGAGATAAGTTTTTCCTCATCTTCAAATTCTTCCACATTTGC AACAATGATGACTATGTCCCCCGTGAGGATCCTAACTACAATCCATTCCA CAAGCTCGGTGATGTGCACCCTACTATTCTCCACCAGTTCAGTACCGTCT GGTCACCTGGGAAGGAAGTCTGCATAGATGAGGGAATGGTGCCATTCCGA GGTAACGTTCATTTCCGCACCTATAACCTGACAAGCCAGACAAGTATGGC CTGAAGGCATATGAATTGTGTGACTCTAGTAATGCATGTTGCTGTCAGTT TGAGCTTTATGGGGGGAAAGGGAAAGAGCCTTCAGCGAAGGGGTTGACAC ACGACATCGTCACCCGGCTGATGGCTCCGTACCTTGCGAAGGGACACACA CTGTACTGTGACAATTATTACACTTCGCCACAACTGTTCCTTGATCTGAG CGATGCAGGTACTAATGCCTGTGGAACGGTGCGAAACCGCAAAGGGCTGC CTCAGGTTACCAAAGAGGCAAAGTTGACAACGCCCAAAGAGAAGATCTGC ATGAAGACCGGGCCCATCCTTGCTCTCAAGTACAAAGACAGGAGGGATGT GAATATGCTATCCACTGCCCACAGTCCAAAGTTCGTTGGCACAGGTAAAC GCAACCGGGACCAGGTGGAGATCACCAAGCCTGAATGCATACACCTGTAC AACAAGTACATGGGGGCAGTGGATACATCGGATCATATGGTGGCGTATCT AAGCTTCAGAAGGCGCACCCTCAAGTGGTGGAAGAAAGCTTTCTTTCACA TCTTCAGTCTCGCTATTCTGAACGCCTACATCTTGTACAAAGAACATCAC AGGCAAACAGGGCGCCAAAACAACTCAGGTGAAGACGCGTCAAGCCTAGA CGAGTCAGTCCAAGACGAGTCAATCCAAGATGAGTCAAGCCTAGACGAGT CAATCCGAGACAACTCCAGCCAAGACACACCAGCCAAGACAACTCCAGCC GAGACAAGAATGGCCCAATGCTGCCCAGAGCATTCCGCAATCGCATTGCA AAGGAGCTGATAAGCACATCCGGCTACACCAAGGTTGGGGTGGGAAGGAG GCAGAGCGCTTCTGCCGCCTCCTTGCTCAGGCTTACAGACCGCCACTTCC TGCAGAAAATCCCGCCAGCAAAAGAAGGAGGCAGGCAGTCTTCAAGAGCC TGCGTTGTCTGCTCTCCTGCAGAAAGGAAGTGGATGAAAAGCCAGAACCA GCAGGAGAAGAAACGGTACGGCCACGAGTCATGTACGCAGTGTAAGCAGT GCCGGGAAACCTTGTGCCTTGAACCATGTATGGAGCTTTACCATACACGC AAGGATTACATCAAGGCCTATCAGAGGATGAGAGGATGGGTCACTGCCAC TACCAACAACGAAACACAAGACACCTAAATCACACACTATTTCTGTAGTT CTTTAATGTTTGCAGGAACTTTGAAGTTTGGAAATATGCAATTTTATTGG TGCAAAGTGTAAAACATCATGAACAACTATTTTATTGCCTTTTATGAATT TATAATCAATAGATTAGGTTAAGACAACATGAATTAGTCTATCGAGGAAA GTAGAGACTGTAAGCTTCTATTTGATGTACAGCAAGCCTTGTCATACAAC ATCAGAATGAAGTTTATTGGATTTTACTGAAAATCCAGTTCAGCACCAAG GACTGAACATCCAATAACTCACCTGTACCATTACCTGCGTACTGTTTTGC CCCATTTGTATTGTTGTCTTGTTCTCAGGACTTCTCAGGAACTTTGTAGT TTTGTTACAAGGCATTCTACTGGTGCTGGAGAGTATATTTTGAAAGATTG TGGAAAATATCTATTTTTATTACTTTTTATGACCTTAGGAGTCAAAAGTA TAGGTAAAGACATGTAACATAGACTCTCAAGATGAGTAGAGACTGTAAGC TTTCATTTGAGGTATAGCAATCCTATATTCAACTTGCTATATTGTGTAGA AATGAAGTTCATTCAGCACTAAAAGAACAGGGTTTGTACTGAAAATCCAG TTCAGCACCAAGGACAATGTACAGTCATTAACTCACCTGTACCATTACCT GTGTACTGTTTTGCCCCATTTGTATTGTTGTCTTGTTCTCAGGACTTCTC AGGAACTTTGTAGTTTTGTTACAAGGCATTCTACTGGTGCTGGAGAGTAT ATTTTGAAAGATTGTGGAAAATATCTATTTTTATTACTTTTTATGACCTT AGGAGTCAAAAGTATAGGTAAAGACATGTAACATAGACTCTCAAGATGAG TAGAGACTGTAAGCTTTCATTTGAGGTATAGCAATCCTATATTCAACTTG CTATATTGTGTAGAAATGAAGTTCATTCAGCACTAAAAGAACAGGGTTTG TACTGAAAATCCAGTTCAGCACCAAGGACAATGTACAGTCATTAACTCAC CTGTACCATTACCTGTGTACAGTTTTGCCCCATTTGTATTGTTGTCTTGT TCTCAGGACTTCTCAGGAACTTTGTAGTTTTGTTACAAGGCATTCTACTG GTGCTGGAGAGTATATTTTGAAAGATTGTGGAAAATATCTATTTTTATTA CTTTTTATGACCTTAGGAGTCAAAAGTATAGGTAAAGACATGTAACATAG ACTCTCAAGATGAGTAGAGACTGTAAGCTTTCATTTGAGGTATAGCAATC CTATATTCAACTTGCTATATTGTGTAGAAATGAAGTTCATTCAGCACTAA AAGAACAGGGTTTGTACTGAAAATCCAGTTCAGCACCAAGGACAATGTAC AGTCATTAACTCACCTGTACCATTACCTGTGTACTGTTTTGCCCCATTTG TATTGTTGTCTTGTTCTCAGGACTTCTCAGGAACTTTGTAGTTTTGTTAC AAGGCATTCTACTGGTGCTGGAGAGTATATTTTGAAAGATTGTGGAAAAT ATCTATTTTTATTACTTTTTATGACCTTAGGAGTCAAAAGTATAGGTAAA GACATGTAACATAGACTCTCAAGATGAGTAGAGACTGTAAGCTTTCATTT GAGGTATAGCAATCCTATATTCAACTTGCTATATTGTGTAGAAATGAAGT TCATTCAGCACTAAAAGAACAGGGTTTGTACTGAAAATCCAGTTCAGCAC CAAGGACAATGTACAGTCATTAACTCACCTGTACCATTACCTGTGTACTG TTTTGCCCCATTTATATTGTTGTCTTGTTCTCAGGACTTCTCAGGAACTT TGTAGTTTTGTTACAAGGCATTCTACTGGTGCTGGAGAGTATATTTTGAA AGATTGTGGAAAAATCTACTTTTTATTACCATTTTATGACTGTATAATCA ATAGCATAGGTGCAGACAACTTCTAATAGACTCTTAAGTGAAGTAGAGAC TGTGAGCTTTCATTTGAGGTATAGCAATCCTATATTCAACTTGCCATACT GTGTAAAAATGAAGTTTATTCAACACTAAAAGAACAGGGATTTTACTCAA TAGTCACTTCAGATCTGAGAACAATGACGAGTCATTCACTCACCTGTAGC ACTACCTGCATGTATTTTTTCCTTATGGTGGAAAGACTTATGTTGTCAGA AGTCTTCAGATAGTTTGTCTTTAAAAATTAACACTTGGAATGCAGAATAT GTAAGTATAATACAAAGGTTTGATGAAAAAAGTGTGTTTTATTGTTTTAT TGCCCCTGTTAACCCTTATGACCGTCGTAATTGTACTCGAGTCTACAATA TCTGAAAAGTACACATTGTTAGCTTTCCAGTGATATATACCTTTATGAGG TTTTCTCAAAGCAAAGTACCTAAAAATAAGCAATATCAAACTAGTACCCC TTGTATGAAAGGTGTCTGGGAACCCCAGCAGTGGGGGCGTGTATTGGTAT AGAACTCCAGCAGGACA

Coding sequence (CDS) from alignment at Sc0000151:634018..638184+

>Blg00218.0 ID=Blg00218.0|Name=Blg00218.0|organism=Branchiostoma lanceolatum|type=CDS|length=1215bp|location=Sequence derived from alignment at Sc0000151:634018..638184+ (Branchiostoma lanceolatum)
ATGGTACCTGACTCTGTGTACAAGACCTGCACGGAGCAGACGAACAAGTA
TGCCCGTGACTACTTTGAAGAACATCCAAAGGAGACTCACGGTGGAAGCT
CACGGATGCGTGAGTGGCCAGACGAGGGCATCTCCGAGTCTGACATGAAG
GTTTTCTTGGCTCTGACAATCGCAATGGGCTTCATCCATCAAGACGTATC
CGACTACTGGAGCACTGACGAACTCCTTCAAACACCATTCTTCCCAGACA
TCATGACCAGAGATAAGTTTTTCCTCATCTTCAAATTCTTCCACATTTGC
AACAATGATGACTATGTCCCCCGTGAGGATCCTAACTACAATCCATTCCA
CAAGCTCGGTGATGTGCACCCTACTATTCTCCACCAGTTCAGTACCGTCT
GGTCACCTGGGAAGGAAGTCTGCATAGATGAGGGAATGGTGCCATTCCGA
GGTACTAATGCCTGTGGAACGGTGCGAAACCGCAAAGGGCTGCCTCAGGT
TACCAAAGAGGCAAAGTTGACAACGCCCAAAGAGAAGATCTGCATGAAGA
CCGGGCCCATCCTTGCTCTCAAGTACAAAGACAGGAGGGATGTGAATATG
CTATCCACTGCCCACAGTCCAAAGTTCGTTGGCACAGGTAAACGCAACCG
GGACCAGGTGGAGATCACCAAGCCTGAATGCATACACCTGTACAACAAGT
ACATGGGGGCAGTGGATACATCGGATCATATGGTGGCGTATCTAAGCTTC
AGAAGGCGCACCCTCAAGTGCCAAGACAACTCCAGCCGAGACAAGAATGG
CCCAATGCTGCCCAGAGCATTCCGCAATCGCATTGCAAAGGAGCTGATAA
GCACATCCGGCTACACCAAGGTTGGGGTGGGAAGGAGGCAGAGCGCTTCT
GCCGCCTCCTTGCTCAGGCTTACAGACCGCCACTTCCTGCAGAAAATCCC
GCCAGCAAAAGAAGGAGGCAGGCAGTCTTCAAGAGCCTGCGTTGTCTGCT
CTCCTGCAGAAAGGAAGTGGATGAAAAGCCAGAACCAGCAGGAGAAGAAA
CGGTACGGCCACGAGTCATGTACGCAGTGTAAGCAGTGCCGGGAAACCTT
GTGCCTTGAACCATGTATGGAGCTTTACCATACACGCAAGGATTACATCA
AGGCCTATCAGAGGATGAGAGGATGGGTCACTGCCACTACCAACAACGAA
ACACAAGACACCTAA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Feature NameUnique NameSpeciesType
Blg00218.0Blg00218.0-proteinBranchiostoma lanceolatumpolypeptide
The following exon feature(s) are a part of this mRNA:
Feature NameUnique NameSpeciesType
Blg00218.0-exon-Sc0000151-1570713199:634018..634468Blg00218.0-exon-Sc0000151-1570713199:634018..634468Branchiostoma lanceolatumexon
Blg00218.0-exon-Sc0000151-1570713199:634726..635044Blg00218.0-exon-Sc0000151-1570713199:634726..635044Branchiostoma lanceolatumexon
Blg00218.0-exon-Sc0000151-1570713199:635251..636116Blg00218.0-exon-Sc0000151-1570713199:635251..636116Branchiostoma lanceolatumexon
Blg00218.0-exon-Sc0000151-1570713199:637570..638184Blg00218.0-exon-Sc0000151-1570713199:637570..638184Branchiostoma lanceolatumexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Sc0000151genomeSc0000151:634018..638184 +
Properties
Property NameValue
GeneIDBlg00218