Blg00210.6 (mRNA) - B. lanceolatum

Overview
NameBlg00210.6
Unique NameBlg00210.6
TypemRNA
OrganismBranchiostoma lanceolatum (Amphioxus)



Sequence
The following sequences are available for this feature:

mRNA from alignment at Sc0000026:2253987..2262228-

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>Blg00210.6 ID=Blg00210.6|Name=Blg00210.6|organism=Branchiostoma lanceolatum|type=mRNA|length=8242bp|location=Sequence derived from alignment at Sc0000026:2253987..2262228- (Branchiostoma lanceolatum)
CTGACGGTCATCGAGTTTTCGGACAACCCTGGAACCCACGAACCAGGTGA GATGTCTTCAAGTTTTATTTTGTTCAAGGACGGAACCTGACGGTCATCGA GTTTTCGGACAACCCTGGAACCCACGAACCAGGTGAGATTTCTTAAAGTT TTATTTTTTACAAGGGCGGAACCTGACAGTCATCGAGTTTTCGGACAACC CTGGAGTCCACGAACCAGGTGAGATTTCTTCAAGTTTTATTTTGTACAAG GATGGAACCTGACAGCCATCGAGTTTTCGGACAACCCTGGAACCCACGAA CCAGGTGAGATTTCTTCAAGTTTTATTTTATACAAGGATGGAACCGGACA GTCATCGAGTTTTCGGACAACCCTGGAACCCACGAACCAGGTGAGATATC AGATCATCAAGTTCAAAAATGATAGAAAATTTGTGGGGACATTTCTCCAG TTTATAGTTGTCGCAAACTGATGGCACTTTGGGGATACTAGTGGGATGCA TATAATATATGTGTCGTACAAAATACTACAGTCTTTTTACGGAAAAGATT GTCTTAAGCCCCAATCTCACGGGACCTGCGGCACTTTGGTGACCACGCTG TGACCCAGCGATTTGACAGCGCGCAAAACAAATTTCATCGATAAAAACGA ATCTTTTTTACGCCCTGTATGCTTTGTTGTCTTTTTAGTCATACTTGTAC GTTTTGCATGATGTTCCCATCATAAAAAATCAAAGTCAAGGGTAACACAA ATCCAACTTACGACACAGCGAGGCCGTCAACGCGCTAAGGGTCCGGTAAG ATGGTTGGCTTAAATCCCCGTGTCAGTGGTTTGTTTTGCCACAACGTGCT TAACTGCTAATTAAATATCGGAACGAAGCAAAGAAAAAGACTATTAGAGC CTACCGCAAGAACAAGAATGACATTTGTTTCTTCCATCAAAAGAAATCAG TTCAACAATCACATGTATTTCAGTACAACTGGTTTTCTTTTTGTTATCAA TGACATTTCATCGAGCCAAGCTTGCACGACTTTAAAGGTTTATACTAGAC GTATACAAGGATTTGTCGCTTTTTCTTGACCAGACCTCCTAATGTAAACA TGCAAGGGGTCCGGAAATCAGAAGCCAAGAAAATCCATGGAGTGCTGATT TGAAATTTACATTGTAAATTTGGTCTGTGGTGTAAACGGTAGGGCATATT CACTTCCGGTTTTCCCACCACAGGCGAACCGGAAGTCAAGTACGTGGCCA ACATGCATGGGAACGAGGTGACCGGACGAGAGATGCTACTCCTCTTCATG CAGTATCTCTGTAACAGGTAGGCATGAATATTCATCTTAATAGCAAGAAA CGAAATGTACGAAGCTTCATCAGAATCGTATGTCAGAGGAAAATGAATGT TCTTGTGATAACGCCTAGAGAAAATTTAACTTGCCGACGTTTCAGAGAAG AAAACAAACGTAAATTTTCGCTTGGACAGCATTTCTTAGCAGCGACACCT AGTTTCCAGAACCAGCCAGAATTGGTCCGAGTAAGGTGACAGACGTTTAC CGAAGCGTCGATCTTCAACAAACTTTGTTGTGTATGATTTCTAACTTTAT CATCACTTATAATCCCCAACCTGATGAAAATGTTCGCGGAAAAAGGCTTT CTGTATATGAGAAAGTTTACACTAGTCATTAAAAAAGATGTCGGGGACAT ACACTCAGTAACGTTTGGGACCATATTCCTGCCGCAACAACGCCACCATG CGGCAAGGAGTAGTACAAGCCATTCAGGCTCTGAGAAAGTTAGCTGAGTA CTTGTATACCTAAACGTGGGCAAGCTTGATTTTCTCTAGCTTTAAGTTGT GTCAAAAGAAATTTTCTTAAAATGAAATGTACCTCTTCATATGAGCAGAA AAGCAACTGATATAATTGTAATGTAATTTTCACATTGATTAGTTAGCAGA AAAAACAATGACAGACATGAAGCAGTCTGACACAGTACCTCACGACAAAT GGGATATGTAGAACAATCATTTTGCTATAAATATGAGTTTAAGACTGTTT TTTCTTACTCAAAGTTATACTCTGAACACATCCTCAAGTTTTAAAAGCGT CTGGCGAGTGAAGCGACTGATCAAATCCACCAGAATCCACATCCTCGCCT CCATGAACCCAGACGGATACGAAATAGCAGCAAGGAAGGTAAGGGTCTGT TTCAAAGTCATAAACTATCTCGTATGTTGCTGCCTTCGCCGTAGGCAGAA GGTTATATTTTTGATCGGAATTTGAGGAGCGATGGTGCTGGCGATATAAC GGATGTTAGGGGTGTTGGTGAGATTTGGTAGGTAAGCTACTGTTGGGGAG ACAAAATTCAAGGTCGAAGATGGGCCTTCTGGCGTTTTTTTCAGTGATGC AGTGGACCTTTTGTGTTTGTTTGTTTGTTTGTTGGCGTTATAACTCGATA GCCATTGAATGGATCGTGATGAAATTTAGTAGGTTGGTGGGGATTGGGAA AATGAAGGTCAAGTTCGATAATGAGCAGTACCGCAGCGGGACTTCAAAGT TTTTGAGTTCAAGTTCTGGATGTGCTATGGTAGTGATTTTTGAGTGGTGG ATAGCTCTTGTTATTATTGTGAACACAAGGCAAACAAGCAAACATCTTTC AAATTTTCTTTCGACGTTGAACTGTAATTTTCAAGACAGTATACAACATA TACGTTCCAGATCGAAGACAAAGGAAAATATTAATTATGATCCTGCATCT TTTTTACAGCCCTTGATCATATTGAGGTATTTTCTTTGGATGAATAAATG ATTTGGAAGATCTTAGAAGAAAGGCAATTTGAAATTAGTATGATGTGCAA AGATTGGAGACATCGCGGAGACTTTTTTTGTGTTTATTTTTGAATAACTT ATTTATTTCAAAATTGTGTAGATGACAACATGTTTGTTTTGTATGTGCCT AACACAAGCTAGCTTTTAGATATCAACATAAGTTTAAACTATATAAGTTC GCGGCAGCGCTATAGACAAATACCGATACAGTATTGGGCAAAATGTTTGA GATGGCTTTAAGTTCGCCGCGAACATAACGCCACCGCGAACATATCTGCA TTTACAGTAATAACGCTTGTACTGTTCACTCTGTTAGGGTCCAGGTAACG TCTGGAGTAATGGTCGTGAGAACGTCCAGGGCATCGACCTCAACAGAAAC TTCCCAGCACTCAACACCATTGCCTACAAAAGCGAGCAACATGGCGGCCC TACTGACCACATCCCAATTCCAAACAGCTACTGGAAAGGGGTACGTGTTC GTTCGTTCGATCCTTCCTTCGATCCTTCCTTCGATCCTTCGATCCTTCGA TCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTC CTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCT TCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTC CTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCT TCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTC CTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCT TCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTC CTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCT TCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTC CTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCT TCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTC CTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCT TCCTTCCTTCCTTCCTTCCTTCCTTCCAGGCGAGCGGGGATGCAAACCCA GTCACGTTTAGGACTGCATTCTCGCCGCAGCGCCCCCTAGTGGCGAAAAG TATAGCTCCAATCATTTTTGCCGCGCGCAAGGCAACAAAAGTACTTCTAA ACCTTTGGCAGGTAGTTGTCTTTTGGCTGTTTGTAATGAATTTTGATTTC TTGTTCCTTGTACAGAATGTGGCCCCAGAAACGGAGGCAGTCATCAGATG GATAAAACAGTATCCGTTTGTCATCAGCGCCAATTTACACGACGGAGCAC TGTTAGCAAATTACCCTTACGACCAAAGTAAAGGTATTGTATTCTTAGTC TGACCCGTCTCATTTTTAACCCTAAAAGTTTCAACGGTCTGAAGGAAAGA GAAACTAATTTCACAAATATAAATTGGTGCACGCCATACCTCTTGAAGGT AGCAAAGTGCGTATTTACTGCATGGAGGATACGTACATTTATACGATCAC AGTTGAAGAACTGCAGAAACTTTTGGGAAATACAGAAGTTTAAAGTTATG TAAAACATGGATGGATCCTGTATCAGTTGACTCTATATAGATAGAAATGC AAATCAACCTGGCTCAGATGCTTGTGTATATTCACTGTTTTGTAATAAGG TTCAATACACGAGTTTCCAGTTTCACGCCGCCATTTTAGGTCAAAGGTCA AATGGCGGCGCAAAACTGGAAACTCGTGCACAACAAAATTCCAAAACAAA CGGATTACTTTTACGTTGATGAAGGATGGCGGATGTTGTCTAAAATGTCT GTTTTTGAAATCTCGTCCAGGTGCTTGTGAGTAATTGCATTTGGCAGATT ACTTTAACCTTTTTTTTCAGTTGCATCCGATACGCCCATTCGCGGTTCTT ATTACGCATGTGCAGTGTCAAGGGTGAAGGTCCCCGGCTTGTAAACAGTT CTAATCATTGTCTAGATTTGCATAACAACGTCCAGACGGGTTTTGTTTGC GTCTCAGGGGTCTTTACCTTTGGCAATGCACATGCGCAGTCGGAACTGCG AATGGGCTTATAGTACACCGTTGTTAATCATTGTAGCCGATCAAAGTATG CCTCTCTTGATCATTAGGCGGCTCGCAGCGTGGTGTCTACGCTCGTTCCC CCGATGATGCCGTCTTCCGTCAGATTGCCGCTTCCTACGCTAACGCTCAC AGGACAATGTCACTGCCAGACTCGGGCTGCCAACGGCACTCGGATTTTGG CAGCCAAGGCGGCATCACAAACGGAGCCGCTTGGTATTCGGTCGCTGGCG GTACGTATGTAAGGCTACAAAAGACGTAAATAGAGTCTATTCCCAGTCAC CAAGAGGGTTTTATGATAATATTTGTAATAATTTTGAAAAATATCTAATA TAAGAAATTCTGACTGACAATTGTTCCAATTTCTTTTCTAAAAAATTGAA TATTAAGAATTTAGAATTGATTTGAATTCAATTAGGTAATTTACACAAAT GATTACAATAAATTGAAAATATTTCTAAATTATAAAAATAACAACCCTTG CGGTGACTATTCAGATCAATAAGATTTATAATGGTATATCAATAAGCTAT ACATCAATACGATGTATCGCCTCGAGATGGATATGGTGATATAAGGCCTG GTTGGGCTCTAATAGCACTAAATAAACCATCGGGTGAGCGAAGCAACCGA GGTGGTTTATGAGTTGGCTAGAGGGACCAAAGAGGCATTAATTGTGTCAG CATATACCCAGAGGAAAAGGGTGTAATGTTATCCTCATATAGCCTGTTAT TAAACATTCTTCCTGTAAATTATAACCTTGCTTCTAGTCTCCTTAATGAA ATACAAGGGGAAGTACGTGATAAAAGAGAATAATCAGCATCTACACATTT TTTACACTGTTTCCAGGAATGCAAGATTTTAACTACCTTCACACAAACTG TTTCGAAATCACTCTGGAACTGTCGTGCGACAAATTCCCGCCAGAAGGCG CTCTTCCGACAGAGTGGAGAAACAACAGGAAGGCGCTGCTTGCTTACATC GAGGAGGTAAAACAGCTTTTATTACCTCCGTGAAAACAGAGGTATTGTTA TGTAGTTGGTGTGCTTGTCTTGGTTTGAGCTCTGAATAATGCAGAGTAAC AGCAAATCGTGAGGTCTTGTGGCGTTACGGCAGGGTGTTCAGCGGTCCCG GGTTCGAATCCCCTAAACGCCACCGATGTTTTACCCTCGGGAAAGGCACT TTGCACTAGCCTCTACCAGGCTCCGCTGATCGCTGGGAAAATAGTAGAAA TCGGCCAAATAGAGTGAATGGTATGTCCTTGGCCAAGGGTAGTCCGCTAT GCAGGGAAGGTCAATAAGCGACCAACGGAGCCTGTCTGGAGTCGGCATCT CGTTTGAGGTCCACTAATCGCTATCGAATAGGTACTAGGTGCGAAGTAGC TAAATACTCCTTTTATTGCTTTCCGACTCGTCCGTGACGGCCCTGACAGG AGCGGCCCATCAGCGAACATGTGACAGGAAGTGTCAGAGGTTGCGATAGT TTCAAAACATAATGGTCCAGTCCAGTGCCCTATATCGTAGTTTCTGCGAC ATTTTTTGTGCATTAAATGCATTTACCGTATCAATTGGAATGGATGTTAC AAGGGAGATTCATGCTAGGGTCACATTTCCAAGCCGGGAACTACAGCATC TATGTTCAGTTCCGAAGTAATGAGCGGAGAAACCAAAACATTCACGCTTT CAGTAAATGCATTTCATATTGAAATCGCACCATGCCGCTCTTGACTGTAA CTTCAGATCCACTGCTTAAGGAAACAAATAACAAAAAAATGAAAGTCAGA GGCTAGATCCTAACTCCGATAGAATCTTCTTTACTCAACAATGGTGTTTG TCCAGGTGGACTAACTTGTAGAAAAGTTATGTCAACTTAGATATTTCATG TAGCATCAGCTCGTACATGGTCTATATAATATATATTTTCCACAGGCTCA CAAAGGCATAAAGGGCTTCGTATTGGACCGTAACCTTGATCCAATTAAGG GAGCGACCATTCACGTGGACGGGATCAATCATGACGTCACAACAGGTAGG TGTCAGTAGTTAGCAGTGCCAGCAACATTACTAGAAACAACTGTATGATA GACTGGGAGGGCCTAGGGGGAAAGGTGATAGAAAGAGAGGGCACACACAG TGGTTTAGGGTGGTTATCTGATTTAGAAAATCTACAGCCTTGAACCAAGG AGGTTATATAACCTCCTTGCTCGAACCGAGACGAGAGGGACAGAGACATT ACGTCATATGTTTGGAACCGCATTATTTTTTTTTGTTATAACACCCCCAT GCGGTAAGTAGTGGCAGTGCACCCAGATGAAGGGAGCAAAAACGTCAATA TGAGGAAATTGACCGTGGTTAAGGGTTGTGATAAAAGAAATTCGCTTGGA AAATGACATACAAAGCTATGTGGTGTTTCCATGGCATAAGTTTCATGACA TTAGTTTTATGCAAAGTTGCATATAGCTCCCCATGTATGAAGATAGGCTA ACATTAACTTTCTGTCAAAATTTGACTAATAACACTGGTAAGCTAAGGTT TTATAGGACATGCAAAACAACTTATAATTATACCATGGAAAATATTTAGA ATTAGATAACGTTGATTTACGCTCTGCTTTTAGCAAAATTAGAACTAGTG CCCATCCCCTTGAAATTGAGAAAGGTCGGTACAAGAACTTACTTGTGTGC GAAAGAACTTGAATAAGAACTAAGTTAGAACTTAGTGTCAGTAGCTAAGA CTAGAGTAGTCATATGTTATATTGTTCGTCATTTTCTATCCGTCCACTCC GTGTTACATGTACATGTACTTGCATTTAGCCTACGGGCAGGAATTTGCAA TAAACTTTCATTATGATTAACGTGCTTTGTCGCTTGCAGCAAACGACGGT GACTTCTGGAGAATGCTGGTCCCTGGTACATACACTGTCACTGCCTCTTA CAATGGCATGACCAGAATCAAACAAGTGACGGTCTCCACTAATAGAGCAC GTACTCTGAACTTCATCTTGGATGACTAAGGAAAAACGCGTGTGGCTTCC TATACTCGTAAAACCAAGACGATCTGTACCTAATGAAAATCCCGTTTCAA GCTTAAAGCACCCGTTTTACTTCTTGAGAAACAAGAGAAGATGTTTTGGG TTCAAACAATATTTACAATTACAAGACTTGTACAAGTTTTGGGTTAACTG TCAGTTGATACCTTATACATGTATACTTAATACATATTCAAC

Coding sequence (CDS) from alignment at Sc0000026:2253987..2262228-

>Blg00210.6 ID=Blg00210.6|Name=Blg00210.6|organism=Branchiostoma lanceolatum|type=CDS|length=999bp|location=Sequence derived from alignment at Sc0000026:2253987..2262228- (Branchiostoma lanceolatum)
ATGCATGGGAACGAGGTGACCGGACGAGAGATGCTACTCCTCTTCATGCA
GTATCTCTGTAACAGTTTTAAAAGCGTCTGGCGAGTGAAGCGACTGATCA
AATCCACCAGAATCCACATCCTCGCCTCCATGAACCCAGACGGATACGAA
ATAGCAGCAAGGAAGGGTCCAGGTAACGTCTGGAGTAATGGTCGTGAGAA
CGTCCAGGGCATCGACCTCAACAGAAACTTCCCAGCACTCAACACCATTG
CCTACAAAAGCGAGCAACATGGCGGCCCTACTGACCACATCCCAATTCCA
AACAGCTACTGGAAAGGGAATGTGGCCCCAGAAACGGAGGCAGTCATCAG
ATGGATAAAACAGTATCCGTTTGTCATCAGCGCCAATTTACACGACGGAG
CACTGTTAGCAAATTACCCTTACGACCAAAGTAAAGGCGGCTCGCAGCGT
GGTGTCTACGCTCGTTCCCCCGATGATGCCGTCTTCCGTCAGATTGCCGC
TTCCTACGCTAACGCTCACAGGACAATGTCACTGCCAGACTCGGGCTGCC
AACGGCACTCGGATTTTGGCAGCCAAGGCGGCATCACAAACGGAGCCGCT
TGGTATTCGGTCGCTGGCGGAATGCAAGATTTTAACTACCTTCACACAAA
CTGTTTCGAAATCACTCTGGAACTGTCGTGCGACAAATTCCCGCCAGAAG
GCGCTCTTCCGACAGAGTGGAGAAACAACAGGAAGGCGCTGCTTGCTTAC
ATCGAGGAGGCTCACAAAGGCATAAAGGGCTTCGTATTGGACCGTAACCT
TGATCCAATTAAGGGAGCGACCATTCACGTGGACGGGATCAATCATGACG
TCACAACAGCAAACGACGGTGACTTCTGGAGAATGCTGGTCCCTGGTACA
TACACTGTCACTGCCTCTTACAATGGCATGACCAGAATCAAACAAGTGAC
GGTCTCCACTAATAGAGCACGTACTCTGAACTTCATCTTGGATGACTAA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Feature NameUnique NameSpeciesType
Blg00210.6Blg00210.6-proteinBranchiostoma lanceolatumpolypeptide
The following exon feature(s) are a part of this mRNA:
Feature NameUnique NameSpeciesType
Blg00210.6-exon-Sc0000026-1570713199:2262183..2262228Blg00210.6-exon-Sc0000026-1570713199:2262183..2262228Branchiostoma lanceolatumexon
Blg00210.6-exon-Sc0000026-1570713199:2260912..2261005Blg00210.6-exon-Sc0000026-1570713199:2260912..2261005Branchiostoma lanceolatumexon
Blg00210.6-exon-Sc0000026-1570713199:2260041..2260140Blg00210.6-exon-Sc0000026-1570713199:2260041..2260140Branchiostoma lanceolatumexon
Blg00210.6-exon-Sc0000026-1570713199:2258939..2259091Blg00210.6-exon-Sc0000026-1570713199:2258939..2259091Branchiostoma lanceolatumexon
Blg00210.6-exon-Sc0000026-1570713199:2257946..2258063Blg00210.6-exon-Sc0000026-1570713199:2257946..2258063Branchiostoma lanceolatumexon
Blg00210.6-exon-Sc0000026-1570713199:2256979..2257161Blg00210.6-exon-Sc0000026-1570713199:2256979..2257161Branchiostoma lanceolatumexon
Blg00210.6-exon-Sc0000026-1570713199:2256223..2256362Blg00210.6-exon-Sc0000026-1570713199:2256223..2256362Branchiostoma lanceolatumexon
Blg00210.6-exon-Sc0000026-1570713199:2255184..2255283Blg00210.6-exon-Sc0000026-1570713199:2255184..2255283Branchiostoma lanceolatumexon
Blg00210.6-exon-Sc0000026-1570713199:2253987..2254339Blg00210.6-exon-Sc0000026-1570713199:2253987..2254339Branchiostoma lanceolatumexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Sc0000026genomeSc0000026:2253987..2262228 -
Properties
Property NameValue
GeneIDBlg00210