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Sequence
The following sequences are available for this feature:
mRNA from alignment at Sc0000026:2253987..2262157- Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >Blg00210.5 ID=Blg00210.5|Name=Blg00210.5|organism=Branchiostoma lanceolatum|type=mRNA|length=8171bp|location=Sequence derived from alignment at Sc0000026:2253987..2262157- (Branchiostoma lanceolatum)
GTTCAAGGACGGAACCTGACGGTCATCGAGTTTTCGGACAACCCTGGAAC
CCACGAACCAGGTGAGATTTCTTAAAGTTTTATTTTTTACAAGGGCGGAA
CCTGACAGTCATCGAGTTTTCGGACAACCCTGGAGTCCACGAACCAGGTG
AGATTTCTTCAAGTTTTATTTTGTACAAGGATGGAACCTGACAGCCATCG
AGTTTTCGGACAACCCTGGAACCCACGAACCAGGTGAGATTTCTTCAAGT
TTTATTTTATACAAGGATGGAACCGGACAGTCATCGAGTTTTCGGACAAC
CCTGGAACCCACGAACCAGGTGAGATATCAGATCATCAAGTTCAAAAATG
ATAGAAAATTTGTGGGGACATTTCTCCAGTTTATAGTTGTCGCAAACTGA
TGGCACTTTGGGGATACTAGTGGGATGCATATAATATATGTGTCGTACAA
AATACTACAGTCTTTTTACGGAAAAGATTGTCTTAAGCCCCAATCTCACG
GGACCTGCGGCACTTTGGTGACCACGCTGTGACCCAGCGATTTGACAGCG
CGCAAAACAAATTTCATCGATAAAAACGAATCTTTTTTACGCCCTGTATG
CTTTGTTGTCTTTTTAGTCATACTTGTACGTTTTGCATGATGTTCCCATC
ATAAAAAATCAAAGTCAAGGGTAACACAAATCCAACTTACGACACAGCGA
GGCCGTCAACGCGCTAAGGGTCCGGTAAGATGGTTGGCTTAAATCCCCGT
GTCAGTGGTTTGTTTTGCCACAACGTGCTTAACTGCTAATTAAATATCGG
AACGAAGCAAAGAAAAAGACTATTAGAGCCTACCGCAAGAACAAGAATGA
CATTTGTTTCTTCCATCAAAAGAAATCAGTTCAACAATCACATGTATTTC
AGTACAACTGGTTTTCTTTTTGTTATCAATGACATTTCATCGAGCCAAGC
TTGCACGACTTTAAAGGTTTATACTAGACGTATACAAGGATTTGTCGCTT
TTTCTTGACCAGACCTCCTAATGTAAACATGCAAGGGGTCCGGAAATCAG
AAGCCAAGAAAATCCATGGAGTGCTGATTTGAAATTTACATTGTAAATTT
GGTCTGTGGTGTAAACGGTAGGGCATATTCACTTCCGGTTTTCCCACCAC
AGGCGAACCGGAAGTCAAGTACGTGGCCAACATGCATGGGAACGAGGTGA
CCGGACGAGAGATGCTACTCCTCTTCATGCAGTATCTCTGTAACAGGTAG
GCATGAATATTCATCTTAATAGCAAGAAACGAAATGTACGAAGCTTCATC
AGAATCGTATGTCAGAGGAAAATGAATGTTCTTGTGATAACGCCTAGAGA
AAATTTAACTTGCCGACGTTTCAGAGAAGAAAACAAACGTAAATTTTCGC
TTGGACAGCATTTCTTAGCAGCGACACCTAGTTTCCAGAACCAGCCAGAA
TTGGTCCGAGTAAGGTGACAGACGTTTACCGAAGCGTCGATCTTCAACAA
ACTTTGTTGTGTATGATTTCTAACTTTATCATCACTTATAATCCCCAACC
TGATGAAAATGTTCGCGGAAAAAGGCTTTCTGTATATGAGAAAGTTTACA
CTAGTCATTAAAAAAGATGTCGGGGACATACACTCAGTAACGTTTGGGAC
CATATTCCTGCCGCAACAACGCCACCATGCGGCAAGGAGTAGTACAAGCC
ATTCAGGCTCTGAGAAAGTTAGCTGAGTACTTGTATACCTAAACGTGGGC
AAGCTTGATTTTCTCTAGCTTTAAGTTGTGTCAAAAGAAATTTTCTTAAA
ATGAAATGTACCTCTTCATATGAGCAGAAAAGCAACTGATATAATTGTAA
TGTAATTTTCACATTGATTAGTTAGCAGAAAAAACAATGACAGACATGAA
GCAGTCTGACACAGTACCTCACGACAAATGGGATATGTAGAACAATCATT
TTGCTATAAATATGAGTTTAAGACTGTTTTTTCTTACTCAAAGTTATACT
CTGAACACATCCTCAAGTTTTAAAAGCGTCTGGCGAGTGAAGCGACTGAT
CAAATCCACCAGAATCCACATCCTCGCCTCCATGAACCCAGACGGATACG
AAATAGCAGCAAGGAAGGTAAGGGTCTGTTTCAAAGTCATAAACTATCTC
GTATGTTGCTGCCTTCGCCGTAGGCAGAAGGTTATATTTTTGATCGGAAT
TTGAGGAGCGATGGTGCTGGCGATATAACGGATGTTAGGGGTGTTGGTGA
GATTTGGTAGGTAAGCTACTGTTGGGGAGACAAAATTCAAGGTCGAAGAT
GGGCCTTCTGGCGTTTTTTTCAGTGATGCAGTGGACCTTTTGTGTTTGTT
TGTTTGTTTGTTGGCGTTATAACTCGATAGCCATTGAATGGATCGTGATG
AAATTTAGTAGGTTGGTGGGGATTGGGAAAATGAAGGTCAAGTTCGATAA
TGAGCAGTACCGCAGCGGGACTTCAAAGTTTTTGAGTTCAAGTTCTGGAT
GTGCTATGGTAGTGATTTTTGAGTGGTGGATAGCTCTTGTTATTATTGTG
AACACAAGGCAAACAAGCAAACATCTTTCAAATTTTCTTTCGACGTTGAA
CTGTAATTTTCAAGACAGTATACAACATATACGTTCCAGATCGAAGACAA
AGGAAAATATTAATTATGATCCTGCATCTTTTTTACAGCCCTTGATCATA
TTGAGGTATTTTCTTTGGATGAATAAATGATTTGGAAGATCTTAGAAGAA
AGGCAATTTGAAATTAGTATGATGTGCAAAGATTGGAGACATCGCGGAGA
CTTTTTTTGTGTTTATTTTTGAATAACTTATTTATTTCAAAATTGTGTAG
ATGACAACATGTTTGTTTTGTATGTGCCTAACACAAGCTAGCTTTTAGAT
ATCAACATAAGTTTAAACTATATAAGTTCGCGGCAGCGCTATAGACAAAT
ACCGATACAGTATTGGGCAAAATGTTTGAGATGGCTTTAAGTTCGCCGCG
AACATAACGCCACCGCGAACATATCTGCATTTACAGTAATAACGCTTGTA
CTGTTCACTCTGTTAGGGTCCAGGTAACGTCTGGAGTAATGGTCGTGAGA
ACGTCCAGGGCATCGACCTCAACAGAAACTTCCCAGCACTCAACACCATT
GCCTACAAAAGCGAGCAACATGGCGGCCCTACTGACCACATCCCAATTCC
AAACAGCTACTGGAAAGGGGTACGTGTTCGTTCGTTCGATCCTTCCTTCG
ATCCTTCCTTCGATCCTTCGATCCTTCGATCCTTCCTTCCTTCCTTCCTT
CCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCC
TTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTT
CCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCC
TTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTT
CCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCC
TTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTT
CCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCC
TTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTT
CCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCC
TTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTT
CCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCC
TTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTT
CCTTCCAGGCGAGCGGGGATGCAAACCCAGTCACGTTTAGGACTGCATTC
TCGCCGCAGCGCCCCCTAGTGGCGAAAAGTATAGCTCCAATCATTTTTGC
CGCGCGCAAGGCAACAAAAGTACTTCTAAACCTTTGGCAGGTAGTTGTCT
TTTGGCTGTTTGTAATGAATTTTGATTTCTTGTTCCTTGTACAGAATGTG
GCCCCAGAAACGGAGGCAGTCATCAGATGGATAAAACAGTATCCGTTTGT
CATCAGCGCCAATTTACACGACGGAGCACTGTTAGCAAATTACCCTTACG
ACCAAAGTAAAGGTATTGTATTCTTAGTCTGACCCGTCTCATTTTTAACC
CTAAAAGTTTCAACGGTCTGAAGGAAAGAGAAACTAATTTCACAAATATA
AATTGGTGCACGCCATACCTCTTGAAGGTAGCAAAGTGCGTATTTACTGC
ATGGAGGATACGTACATTTATACGATCACAGTTGAAGAACTGCAGAAACT
TTTGGGAAATACAGAAGTTTAAAGTTATGTAAAACATGGATGGATCCTGT
ATCAGTTGACTCTATATAGATAGAAATGCAAATCAACCTGGCTCAGATGC
TTGTGTATATTCACTGTTTTGTAATAAGGTTCAATACACGAGTTTCCAGT
TTCACGCCGCCATTTTAGGTCAAAGGTCAAATGGCGGCGCAAAACTGGAA
ACTCGTGCACAACAAAATTCCAAAACAAACGGATTACTTTTACGTTGATG
AAGGATGGCGGATGTTGTCTAAAATGTCTGTTTTTGAAATCTCGTCCAGG
TGCTTGTGAGTAATTGCATTTGGCAGATTACTTTAACCTTTTTTTTCAGT
TGCATCCGATACGCCCATTCGCGGTTCTTATTACGCATGTGCAGTGTCAA
GGGTGAAGGTCCCCGGCTTGTAAACAGTTCTAATCATTGTCTAGATTTGC
ATAACAACGTCCAGACGGGTTTTGTTTGCGTCTCAGGGGTCTTTACCTTT
GGCAATGCACATGCGCAGTCGGAACTGCGAATGGGCTTATAGTACACCGT
TGTTAATCATTGTAGCCGATCAAAGTATGCCTCTCTTGATCATTAGGCGG
CTCGCAGCGTGGTGTCTACGCTCGTTCCCCCGATGATGCCGTCTTCCGTC
AGATTGCCGCTTCCTACGCTAACGCTCACAGGACAATGTCACTGCCAGAC
TCGGGCTGCCAACGGCACTCGGATTTTGGCAGCCAAGGCGGCATCACAAA
CGGAGCCGCTTGGTATTCGGTCGCTGGCGGTACGTATGTAAGGCTACAAA
AGACGTAAATAGAGTCTATTCCCAGTCACCAAGAGGGTTTTATGATAATA
TTTGTAATAATTTTGAAAAATATCTAATATAAGAAATTCTGACTGACAAT
TGTTCCAATTTCTTTTCTAAAAAATTGAATATTAAGAATTTAGAATTGAT
TTGAATTCAATTAGGTAATTTACACAAATGATTACAATAAATTGAAAATA
TTTCTAAATTATAAAAATAACAACCCTTGCGGTGACTATTCAGATCAATA
AGATTTATAATGGTATATCAATAAGCTATACATCAATACGATGTATCGCC
TCGAGATGGATATGGTGATATAAGGCCTGGTTGGGCTCTAATAGCACTAA
ATAAACCATCGGGTGAGCGAAGCAACCGAGGTGGTTTATGAGTTGGCTAG
AGGGACCAAAGAGGCATTAATTGTGTCAGCATATACCCAGAGGAAAAGGG
TGTAATGTTATCCTCATATAGCCTGTTATTAAACATTCTTCCTGTAAATT
ATAACCTTGCTTCTAGTCTCCTTAATGAAATACAAGGGGAAGTACGTGAT
AAAAGAGAATAATCAGCATCTACACATTTTTTACACTGTTTCCAGGAATG
CAAGATTTTAACTACCTTCACACAAACTGTTTCGAAATCACTCTGGAACT
GTCGTGCGACAAATTCCCGCCAGAAGGCGCTCTTCCGACAGAGTGGAGAA
ACAACAGGAAGGCGCTGCTTGCTTACATCGAGGAGGTAAAACAGCTTTTA
TTACCTCCGTGAAAACAGAGGTATTGTTATGTAGTTGGTGTGCTTGTCTT
GGTTTGAGCTCTGAATAATGCAGAGTAACAGCAAATCGTGAGGTCTTGTG
GCGTTACGGCAGGGTGTTCAGCGGTCCCGGGTTCGAATCCCCTAAACGCC
ACCGATGTTTTACCCTCGGGAAAGGCACTTTGCACTAGCCTCTACCAGGC
TCCGCTGATCGCTGGGAAAATAGTAGAAATCGGCCAAATAGAGTGAATGG
TATGTCCTTGGCCAAGGGTAGTCCGCTATGCAGGGAAGGTCAATAAGCGA
CCAACGGAGCCTGTCTGGAGTCGGCATCTCGTTTGAGGTCCACTAATCGC
TATCGAATAGGTACTAGGTGCGAAGTAGCTAAATACTCCTTTTATTGCTT
TCCGACTCGTCCGTGACGGCCCTGACAGGAGCGGCCCATCAGCGAACATG
TGACAGGAAGTGTCAGAGGTTGCGATAGTTTCAAAACATAATGGTCCAGT
CCAGTGCCCTATATCGTAGTTTCTGCGACATTTTTTGTGCATTAAATGCA
TTTACCGTATCAATTGGAATGGATGTTACAAGGGAGATTCATGCTAGGGT
CACATTTCCAAGCCGGGAACTACAGCATCTATGTTCAGTTCCGAAGTAAT
GAGCGGAGAAACCAAAACATTCACGCTTTCAGTAAATGCATTTCATATTG
AAATCGCACCATGCCGCTCTTGACTGTAACTTCAGATCCACTGCTTAAGG
AAACAAATAACAAAAAAATGAAAGTCAGAGGCTAGATCCTAACTCCGATA
GAATCTTCTTTACTCAACAATGGTGTTTGTCCAGGTGGACTAACTTGTAG
AAAAGTTATGTCAACTTAGATATTTCATGTAGCATCAGCTCGTACATGGT
CTATATAATATATATTTTCCACAGGCTCACAAAGGCATAAAGGGCTTCGT
ATTGGACCGTAACCTTGATCCAATTAAGGGAGCGACCATTCACGTGGACG
GGATCAATCATGACGTCACAACAGGTAGGTGTCAGTAGTTAGCAGTGCCA
GCAACATTACTAGAAACAACTGTATGATAGACTGGGAGGGCCTAGGGGGA
AAGGTGATAGAAAGAGAGGGCACACACAGTGGTTTAGGGTGGTTATCTGA
TTTAGAAAATCTACAGCCTTGAACCAAGGAGGTTATATAACCTCCTTGCT
CGAACCGAGACGAGAGGGACAGAGACATTACGTCATATGTTTGGAACCGC
ATTATTTTTTTTTGTTATAACACCCCCATGCGGTAAGTAGTGGCAGTGCA
CCCAGATGAAGGGAGCAAAAACGTCAATATGAGGAAATTGACCGTGGTTA
AGGGTTGTGATAAAAGAAATTCGCTTGGAAAATGACATACAAAGCTATGT
GGTGTTTCCATGGCATAAGTTTCATGACATTAGTTTTATGCAAAGTTGCA
TATAGCTCCCCATGTATGAAGATAGGCTAACATTAACTTTCTGTCAAAAT
TTGACTAATAACACTGGTAAGCTAAGGTTTTATAGGACATGCAAAACAAC
TTATAATTATACCATGGAAAATATTTAGAATTAGATAACGTTGATTTACG
CTCTGCTTTTAGCAAAATTAGAACTAGTGCCCATCCCCTTGAAATTGAGA
AAGGTCGGTACAAGAACTTACTTGTGTGCGAAAGAACTTGAATAAGAACT
AAGTTAGAACTTAGTGTCAGTAGCTAAGACTAGAGTAGTCATATGTTATA
TTGTTCGTCATTTTCTATCCGTCCACTCCGTGTTACATGTACATGTACTT
GCATTTAGCCTACGGGCAGGAATTTGCAATAAACTTTCATTATGATTAAC
GTGCTTTGTCGCTTGCAGCAAACGACGGTGACTTCTGGAGAATGCTGGTC
CCTGGTACATACACTGTCACTGCCTCTTACAATGGCATGACCAGAATCAA
ACAAGTGACGGTCTCCACTAATAGAGCACGTACTCTGAACTTCATCTTGG
ATGACTAAGGAAAAACGCGTGTGGCTTCCTATACTCGTAAAACCAAGACG
ATCTGTACCTAATGAAAATCCCGTTTCAAGCTTAAAGCACCCGTTTTACT
TCTTGAGAAACAAGAGAAGATGTTTTGGGTTCAAACAATATTTACAATTA
CAAGACTTGTACAAGTTTTGGGTTAACTGTCAGTTGATACCTTATACATG
TATACTTAATACATATTCAAC Coding sequence (CDS) from alignment at Sc0000026:2253987..2262157- >Blg00210.5 ID=Blg00210.5|Name=Blg00210.5|organism=Branchiostoma lanceolatum|type=CDS|length=918bp|location=Sequence derived from alignment at Sc0000026:2253987..2262157- (Branchiostoma lanceolatum)
ATGCATGGGAACGAGGTGACCGGACGAGAGATGCTACTCCTCTTCATGCA
GTATCTCTGTAACAGTTTTAAAAGCGTCTGGCGAGTGAAGCGACTGATCA
AATCCACCAGAATCCACATCCTCGCCTCCATGAACCCAGACGGATACGAA
ATAGCAGCAAGGAAGGGTCCAGGTAACGTCTGGAGTAATGGTCGTGAGAA
CGTCCAGGGCATCGACCTCAACAGAAACTTCCCAGCACTCAACACCATTG
CCTACAAAAGCGAGCAACATGGCGGCCCTACTGACCACATCCCAATTCCA
AACAGCTACTGGAAAGGGAATGTGGCCCCAGAAACGGAGGCAGTCATCAG
ATGGATAAAACAGTATCCGTTTGTCATCAGCGCCAATTTACACGACGGAG
CACTGTTAGCAAATTACCCTTACGACCAAAGTAAAGGCGGCTCGCAGCGT
GGTGTCTACGCTCGTTCCCCCGATGATGCCGTCTTCCGTCAGATTGCCGC
TTCCTACGCTAACGCTCACAGGACAATGTCACTGCCAGACTCGGGCTGCC
AACGGCACTCGGATTTTGGCAGCCAAGGCGGCATCACAAACGGAGCCGCT
TGGTATTCGGTCGCTGGCGGCGCTCTTCCGACAGAGTGGAGAAACAACAG
GAAGGCGCTGCTTGCTTACATCGAGGAGGCTCACAAAGGCATAAAGGGCT
TCGTATTGGACCGTAACCTTGATCCAATTAAGGGAGCGACCATTCACGTG
GACGGGATCAATCATGACGTCACAACAGCAAACGACGGTGACTTCTGGAG
AATGCTGGTCCCTGGTACATACACTGTCACTGCCTCTTACAATGGCATGA
CCAGAATCAAACAAGTGACGGTCTCCACTAATAGAGCACGTACTCTGAAC
TTCATCTTGGATGACTAA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| Blg00210.5-exon-Sc0000026-1570713199:2262097..2262157 | Blg00210.5-exon-Sc0000026-1570713199:2262097..2262157 | Branchiostoma lanceolatum | exon |
| Blg00210.5-exon-Sc0000026-1570713199:2260912..2261005 | Blg00210.5-exon-Sc0000026-1570713199:2260912..2261005 | Branchiostoma lanceolatum | exon |
| Blg00210.5-exon-Sc0000026-1570713199:2260041..2260140 | Blg00210.5-exon-Sc0000026-1570713199:2260041..2260140 | Branchiostoma lanceolatum | exon |
| Blg00210.5-exon-Sc0000026-1570713199:2258939..2259091 | Blg00210.5-exon-Sc0000026-1570713199:2258939..2259091 | Branchiostoma lanceolatum | exon |
| Blg00210.5-exon-Sc0000026-1570713199:2257946..2258063 | Blg00210.5-exon-Sc0000026-1570713199:2257946..2258063 | Branchiostoma lanceolatum | exon |
| Blg00210.5-exon-Sc0000026-1570713199:2256979..2257161 | Blg00210.5-exon-Sc0000026-1570713199:2256979..2257161 | Branchiostoma lanceolatum | exon |
| Blg00210.5-exon-Sc0000026-1570713199:2256223..2256281 | Blg00210.5-exon-Sc0000026-1570713199:2256223..2256281 | Branchiostoma lanceolatum | exon |
| Blg00210.5-exon-Sc0000026-1570713199:2255184..2255283 | Blg00210.5-exon-Sc0000026-1570713199:2255184..2255283 | Branchiostoma lanceolatum | exon |
| Blg00210.5-exon-Sc0000026-1570713199:2253987..2254339 | Blg00210.5-exon-Sc0000026-1570713199:2253987..2254339 | Branchiostoma lanceolatum | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| Sc0000026 | genome | Sc0000026:2253987..2262157 - |
Properties
| Property Name | Value |
|---|
| GeneID | Blg00210 |
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