Blg00210.4 (mRNA) - B. lanceolatum

Overview
NameBlg00210.4
Unique NameBlg00210.4
TypemRNA
OrganismBranchiostoma lanceolatum (Amphioxus)



Sequence
The following sequences are available for this feature:

mRNA from alignment at Sc0000026:2253987..2261962-

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>Blg00210.4 ID=Blg00210.4|Name=Blg00210.4|organism=Branchiostoma lanceolatum|type=mRNA|length=7976bp|location=Sequence derived from alignment at Sc0000026:2253987..2261962- (Branchiostoma lanceolatum)
CATCGAGTTTTCGGACAACCCTGGAACCCACGAACCAGGTGAGATTTCTT CAAGTTTTATTTTATACAAGGATGGAACCGGACAGTCATCGAGTTTTCGG ACAACCCTGGAACCCACGAACCAGGTGAGATATCAGATCATCAAGTTCAA AAATGATAGAAAATTTGTGGGGACATTTCTCCAGTTTATAGTTGTCGCAA ACTGATGGCACTTTGGGGATACTAGTGGGATGCATATAATATATGTGTCG TACAAAATACTACAGTCTTTTTACGGAAAAGATTGTCTTAAGCCCCAATC TCACGGGACCTGCGGCACTTTGGTGACCACGCTGTGACCCAGCGATTTGA CAGCGCGCAAAACAAATTTCATCGATAAAAACGAATCTTTTTTACGCCCT GTATGCTTTGTTGTCTTTTTAGTCATACTTGTACGTTTTGCATGATGTTC CCATCATAAAAAATCAAAGTCAAGGGTAACACAAATCCAACTTACGACAC AGCGAGGCCGTCAACGCGCTAAGGGTCCGGTAAGATGGTTGGCTTAAATC CCCGTGTCAGTGGTTTGTTTTGCCACAACGTGCTTAACTGCTAATTAAAT ATCGGAACGAAGCAAAGAAAAAGACTATTAGAGCCTACCGCAAGAACAAG AATGACATTTGTTTCTTCCATCAAAAGAAATCAGTTCAACAATCACATGT ATTTCAGTACAACTGGTTTTCTTTTTGTTATCAATGACATTTCATCGAGC CAAGCTTGCACGACTTTAAAGGTTTATACTAGACGTATACAAGGATTTGT CGCTTTTTCTTGACCAGACCTCCTAATGTAAACATGCAAGGGGTCCGGAA ATCAGAAGCCAAGAAAATCCATGGAGTGCTGATTTGAAATTTACATTGTA AATTTGGTCTGTGGTGTAAACGGTAGGGCATATTCACTTCCGGTTTTCCC ACCACAGGCGAACCGGAAGTCAAGTACGTGGCCAACATGCATGGGAACGA GGTGACCGGACGAGAGATGCTACTCCTCTTCATGCAGTATCTCTGTAACA GGTAGGCATGAATATTCATCTTAATAGCAAGAAACGAAATGTACGAAGCT TCATCAGAATCGTATGTCAGAGGAAAATGAATGTTCTTGTGATAACGCCT AGAGAAAATTTAACTTGCCGACGTTTCAGAGAAGAAAACAAACGTAAATT TTCGCTTGGACAGCATTTCTTAGCAGCGACACCTAGTTTCCAGAACCAGC CAGAATTGGTCCGAGTAAGGTGACAGACGTTTACCGAAGCGTCGATCTTC AACAAACTTTGTTGTGTATGATTTCTAACTTTATCATCACTTATAATCCC CAACCTGATGAAAATGTTCGCGGAAAAAGGCTTTCTGTATATGAGAAAGT TTACACTAGTCATTAAAAAAGATGTCGGGGACATACACTCAGTAACGTTT GGGACCATATTCCTGCCGCAACAACGCCACCATGCGGCAAGGAGTAGTAC AAGCCATTCAGGCTCTGAGAAAGTTAGCTGAGTACTTGTATACCTAAACG TGGGCAAGCTTGATTTTCTCTAGCTTTAAGTTGTGTCAAAAGAAATTTTC TTAAAATGAAATGTACCTCTTCATATGAGCAGAAAAGCAACTGATATAAT TGTAATGTAATTTTCACATTGATTAGTTAGCAGAAAAAACAATGACAGAC ATGAAGCAGTCTGACACAGTACCTCACGACAAATGGGATATGTAGAACAA TCATTTTGCTATAAATATGAGTTTAAGACTGTTTTTTCTTACTCAAAGTT ATACTCTGAACACATCCTCAAGTTTTAAAAGCGTCTGGCGAGTGAAGCGA CTGATCAAATCCACCAGAATCCACATCCTCGCCTCCATGAACCCAGACGG ATACGAAATAGCAGCAAGGAAGGTAAGGGTCTGTTTCAAAGTCATAAACT ATCTCGTATGTTGCTGCCTTCGCCGTAGGCAGAAGGTTATATTTTTGATC GGAATTTGAGGAGCGATGGTGCTGGCGATATAACGGATGTTAGGGGTGTT GGTGAGATTTGGTAGGTAAGCTACTGTTGGGGAGACAAAATTCAAGGTCG AAGATGGGCCTTCTGGCGTTTTTTTCAGTGATGCAGTGGACCTTTTGTGT TTGTTTGTTTGTTTGTTGGCGTTATAACTCGATAGCCATTGAATGGATCG TGATGAAATTTAGTAGGTTGGTGGGGATTGGGAAAATGAAGGTCAAGTTC GATAATGAGCAGTACCGCAGCGGGACTTCAAAGTTTTTGAGTTCAAGTTC TGGATGTGCTATGGTAGTGATTTTTGAGTGGTGGATAGCTCTTGTTATTA TTGTGAACACAAGGCAAACAAGCAAACATCTTTCAAATTTTCTTTCGACG TTGAACTGTAATTTTCAAGACAGTATACAACATATACGTTCCAGATCGAA GACAAAGGAAAATATTAATTATGATCCTGCATCTTTTTTACAGCCCTTGA TCATATTGAGGTATTTTCTTTGGATGAATAAATGATTTGGAAGATCTTAG AAGAAAGGCAATTTGAAATTAGTATGATGTGCAAAGATTGGAGACATCGC GGAGACTTTTTTTGTGTTTATTTTTGAATAACTTATTTATTTCAAAATTG TGTAGATGACAACATGTTTGTTTTGTATGTGCCTAACACAAGCTAGCTTT TAGATATCAACATAAGTTTAAACTATATAAGTTCGCGGCAGCGCTATAGA CAAATACCGATACAGTATTGGGCAAAATGTTTGAGATGGCTTTAAGTTCG CCGCGAACATAACGCCACCGCGAACATATCTGCATTTACAGTAATAACGC TTGTACTGTTCACTCTGTTAGGGTCCAGGTAACGTCTGGAGTAATGGTCG TGAGAACGTCCAGGGCATCGACCTCAACAGAAACTTCCCAGCACTCAACA CCATTGCCTACAAAAGCGAGCAACATGGCGGCCCTACTGACCACATCCCA ATTCCAAACAGCTACTGGAAAGGGGTACGTGTTCGTTCGTTCGATCCTTC CTTCGATCCTTCCTTCGATCCTTCGATCCTTCGATCCTTCCTTCCTTCCT TCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTC CTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCT TCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTC CTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCT TCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTC CTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCT TCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTC CTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCT TCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTC CTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCT TCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTC CTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCT TCCTTCCTTCCAGGCGAGCGGGGATGCAAACCCAGTCACGTTTAGGACTG CATTCTCGCCGCAGCGCCCCCTAGTGGCGAAAAGTATAGCTCCAATCATT TTTGCCGCGCGCAAGGCAACAAAAGTACTTCTAAACCTTTGGCAGGTAGT TGTCTTTTGGCTGTTTGTAATGAATTTTGATTTCTTGTTCCTTGTACAGA ATGTGGCCCCAGAAACGGAGGCAGTCATCAGATGGATAAAACAGTATCCG TTTGTCATCAGCGCCAATTTACACGACGGAGCACTGTTAGCAAATTACCC TTACGACCAAAGTAAAGGTATTGTATTCTTAGTCTGACCCGTCTCATTTT TAACCCTAAAAGTTTCAACGGTCTGAAGGAAAGAGAAACTAATTTCACAA ATATAAATTGGTGCACGCCATACCTCTTGAAGGTAGCAAAGTGCGTATTT ACTGCATGGAGGATACGTACATTTATACGATCACAGTTGAAGAACTGCAG AAACTTTTGGGAAATACAGAAGTTTAAAGTTATGTAAAACATGGATGGAT CCTGTATCAGTTGACTCTATATAGATAGAAATGCAAATCAACCTGGCTCA GATGCTTGTGTATATTCACTGTTTTGTAATAAGGTTCAATACACGAGTTT CCAGTTTCACGCCGCCATTTTAGGTCAAAGGTCAAATGGCGGCGCAAAAC TGGAAACTCGTGCACAACAAAATTCCAAAACAAACGGATTACTTTTACGT TGATGAAGGATGGCGGATGTTGTCTAAAATGTCTGTTTTTGAAATCTCGT CCAGGTGCTTGTGAGTAATTGCATTTGGCAGATTACTTTAACCTTTTTTT TCAGTTGCATCCGATACGCCCATTCGCGGTTCTTATTACGCATGTGCAGT GTCAAGGGTGAAGGTCCCCGGCTTGTAAACAGTTCTAATCATTGTCTAGA TTTGCATAACAACGTCCAGACGGGTTTTGTTTGCGTCTCAGGGGTCTTTA CCTTTGGCAATGCACATGCGCAGTCGGAACTGCGAATGGGCTTATAGTAC ACCGTTGTTAATCATTGTAGCCGATCAAAGTATGCCTCTCTTGATCATTA GGCGGCTCGCAGCGTGGTGTCTACGCTCGTTCCCCCGATGATGCCGTCTT CCGTCAGATTGCCGCTTCCTACGCTAACGCTCACAGGACAATGTCACTGC CAGACTCGGGCTGCCAACGGCACTCGGATTTTGGCAGCCAAGGCGGCATC ACAAACGGAGCCGCTTGGTATTCGGTCGCTGGCGGTACGTATGTAAGGCT ACAAAAGACGTAAATAGAGTCTATTCCCAGTCACCAAGAGGGTTTTATGA TAATATTTGTAATAATTTTGAAAAATATCTAATATAAGAAATTCTGACTG ACAATTGTTCCAATTTCTTTTCTAAAAAATTGAATATTAAGAATTTAGAA TTGATTTGAATTCAATTAGGTAATTTACACAAATGATTACAATAAATTGA AAATATTTCTAAATTATAAAAATAACAACCCTTGCGGTGACTATTCAGAT CAATAAGATTTATAATGGTATATCAATAAGCTATACATCAATACGATGTA TCGCCTCGAGATGGATATGGTGATATAAGGCCTGGTTGGGCTCTAATAGC ACTAAATAAACCATCGGGTGAGCGAAGCAACCGAGGTGGTTTATGAGTTG GCTAGAGGGACCAAAGAGGCATTAATTGTGTCAGCATATACCCAGAGGAA AAGGGTGTAATGTTATCCTCATATAGCCTGTTATTAAACATTCTTCCTGT AAATTATAACCTTGCTTCTAGTCTCCTTAATGAAATACAAGGGGAAGTAC GTGATAAAAGAGAATAATCAGCATCTACACATTTTTTACACTGTTTCCAG GAATGCAAGATTTTAACTACCTTCACACAAACTGTTTCGAAATCACTCTG GAACTGTCGTGCGACAAATTCCCGCCAGAAGGCGCTCTTCCGACAGAGTG GAGAAACAACAGGAAGGCGCTGCTTGCTTACATCGAGGAGGTAAAACAGC TTTTATTACCTCCGTGAAAACAGAGGTATTGTTATGTAGTTGGTGTGCTT GTCTTGGTTTGAGCTCTGAATAATGCAGAGTAACAGCAAATCGTGAGGTC TTGTGGCGTTACGGCAGGGTGTTCAGCGGTCCCGGGTTCGAATCCCCTAA ACGCCACCGATGTTTTACCCTCGGGAAAGGCACTTTGCACTAGCCTCTAC CAGGCTCCGCTGATCGCTGGGAAAATAGTAGAAATCGGCCAAATAGAGTG AATGGTATGTCCTTGGCCAAGGGTAGTCCGCTATGCAGGGAAGGTCAATA AGCGACCAACGGAGCCTGTCTGGAGTCGGCATCTCGTTTGAGGTCCACTA ATCGCTATCGAATAGGTACTAGGTGCGAAGTAGCTAAATACTCCTTTTAT TGCTTTCCGACTCGTCCGTGACGGCCCTGACAGGAGCGGCCCATCAGCGA ACATGTGACAGGAAGTGTCAGAGGTTGCGATAGTTTCAAAACATAATGGT CCAGTCCAGTGCCCTATATCGTAGTTTCTGCGACATTTTTTGTGCATTAA ATGCATTTACCGTATCAATTGGAATGGATGTTACAAGGGAGATTCATGCT AGGGTCACATTTCCAAGCCGGGAACTACAGCATCTATGTTCAGTTCCGAA GTAATGAGCGGAGAAACCAAAACATTCACGCTTTCAGTAAATGCATTTCA TATTGAAATCGCACCATGCCGCTCTTGACTGTAACTTCAGATCCACTGCT TAAGGAAACAAATAACAAAAAAATGAAAGTCAGAGGCTAGATCCTAACTC CGATAGAATCTTCTTTACTCAACAATGGTGTTTGTCCAGGTGGACTAACT TGTAGAAAAGTTATGTCAACTTAGATATTTCATGTAGCATCAGCTCGTAC ATGGTCTATATAATATATATTTTCCACAGGCTCACAAAGGCATAAAGGGC TTCGTATTGGACCGTAACCTTGATCCAATTAAGGGAGCGACCATTCACGT GGACGGGATCAATCATGACGTCACAACAGGTAGGTGTCAGTAGTTAGCAG TGCCAGCAACATTACTAGAAACAACTGTATGATAGACTGGGAGGGCCTAG GGGGAAAGGTGATAGAAAGAGAGGGCACACACAGTGGTTTAGGGTGGTTA TCTGATTTAGAAAATCTACAGCCTTGAACCAAGGAGGTTATATAACCTCC TTGCTCGAACCGAGACGAGAGGGACAGAGACATTACGTCATATGTTTGGA ACCGCATTATTTTTTTTTGTTATAACACCCCCATGCGGTAAGTAGTGGCA GTGCACCCAGATGAAGGGAGCAAAAACGTCAATATGAGGAAATTGACCGT GGTTAAGGGTTGTGATAAAAGAAATTCGCTTGGAAAATGACATACAAAGC TATGTGGTGTTTCCATGGCATAAGTTTCATGACATTAGTTTTATGCAAAG TTGCATATAGCTCCCCATGTATGAAGATAGGCTAACATTAACTTTCTGTC AAAATTTGACTAATAACACTGGTAAGCTAAGGTTTTATAGGACATGCAAA ACAACTTATAATTATACCATGGAAAATATTTAGAATTAGATAACGTTGAT TTACGCTCTGCTTTTAGCAAAATTAGAACTAGTGCCCATCCCCTTGAAAT TGAGAAAGGTCGGTACAAGAACTTACTTGTGTGCGAAAGAACTTGAATAA GAACTAAGTTAGAACTTAGTGTCAGTAGCTAAGACTAGAGTAGTCATATG TTATATTGTTCGTCATTTTCTATCCGTCCACTCCGTGTTACATGTACATG TACTTGCATTTAGCCTACGGGCAGGAATTTGCAATAAACTTTCATTATGA TTAACGTGCTTTGTCGCTTGCAGCAAACGACGGTGACTTCTGGAGAATGC TGGTCCCTGGTACATACACTGTCACTGCCTCTTACAATGGCATGACCAGA ATCAAACAAGTGACGGTCTCCACTAATAGAGCACGTACTCTGAACTTCAT CTTGGATGACTAAGGAAAAACGCGTGTGGCTTCCTATACTCGTAAAACCA AGACGATCTGTACCTAATGAAAATCCCGTTTCAAGCTTAAAGCACCCGTT TTACTTCTTGAGAAACAAGAGAAGATGTTTTGGGTTCAAACAATATTTAC AATTACAAGACTTGTACAAGTTTTGGGTTAACTGTCAGTTGATACCTTAT ACATGTATACTTAATACATATTCAAC

Coding sequence (CDS) from alignment at Sc0000026:2253987..2261962-

>Blg00210.4 ID=Blg00210.4|Name=Blg00210.4|organism=Branchiostoma lanceolatum|type=CDS|length=999bp|location=Sequence derived from alignment at Sc0000026:2253987..2261962- (Branchiostoma lanceolatum)
ATGCATGGGAACGAGGTGACCGGACGAGAGATGCTACTCCTCTTCATGCA
GTATCTCTGTAACAGTTTTAAAAGCGTCTGGCGAGTGAAGCGACTGATCA
AATCCACCAGAATCCACATCCTCGCCTCCATGAACCCAGACGGATACGAA
ATAGCAGCAAGGAAGGGTCCAGGTAACGTCTGGAGTAATGGTCGTGAGAA
CGTCCAGGGCATCGACCTCAACAGAAACTTCCCAGCACTCAACACCATTG
CCTACAAAAGCGAGCAACATGGCGGCCCTACTGACCACATCCCAATTCCA
AACAGCTACTGGAAAGGGAATGTGGCCCCAGAAACGGAGGCAGTCATCAG
ATGGATAAAACAGTATCCGTTTGTCATCAGCGCCAATTTACACGACGGAG
CACTGTTAGCAAATTACCCTTACGACCAAAGTAAAGGCGGCTCGCAGCGT
GGTGTCTACGCTCGTTCCCCCGATGATGCCGTCTTCCGTCAGATTGCCGC
TTCCTACGCTAACGCTCACAGGACAATGTCACTGCCAGACTCGGGCTGCC
AACGGCACTCGGATTTTGGCAGCCAAGGCGGCATCACAAACGGAGCCGCT
TGGTATTCGGTCGCTGGCGGAATGCAAGATTTTAACTACCTTCACACAAA
CTGTTTCGAAATCACTCTGGAACTGTCGTGCGACAAATTCCCGCCAGAAG
GCGCTCTTCCGACAGAGTGGAGAAACAACAGGAAGGCGCTGCTTGCTTAC
ATCGAGGAGGCTCACAAAGGCATAAAGGGCTTCGTATTGGACCGTAACCT
TGATCCAATTAAGGGAGCGACCATTCACGTGGACGGGATCAATCATGACG
TCACAACAGCAAACGACGGTGACTTCTGGAGAATGCTGGTCCCTGGTACA
TACACTGTCACTGCCTCTTACAATGGCATGACCAGAATCAAACAAGTGAC
GGTCTCCACTAATAGAGCACGTACTCTGAACTTCATCTTGGATGACTAA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Feature NameUnique NameSpeciesType
Blg00210.4Blg00210.4-proteinBranchiostoma lanceolatumpolypeptide
The following exon feature(s) are a part of this mRNA:
Feature NameUnique NameSpeciesType
Blg00210.4-exon-Sc0000026-1570713199:2261925..2261962Blg00210.4-exon-Sc0000026-1570713199:2261925..2261962Branchiostoma lanceolatumexon
Blg00210.4-exon-Sc0000026-1570713199:2260912..2261005Blg00210.4-exon-Sc0000026-1570713199:2260912..2261005Branchiostoma lanceolatumexon
Blg00210.4-exon-Sc0000026-1570713199:2260041..2260140Blg00210.4-exon-Sc0000026-1570713199:2260041..2260140Branchiostoma lanceolatumexon
Blg00210.4-exon-Sc0000026-1570713199:2258939..2259091Blg00210.4-exon-Sc0000026-1570713199:2258939..2259091Branchiostoma lanceolatumexon
Blg00210.4-exon-Sc0000026-1570713199:2257946..2258063Blg00210.4-exon-Sc0000026-1570713199:2257946..2258063Branchiostoma lanceolatumexon
Blg00210.4-exon-Sc0000026-1570713199:2256979..2257161Blg00210.4-exon-Sc0000026-1570713199:2256979..2257161Branchiostoma lanceolatumexon
Blg00210.4-exon-Sc0000026-1570713199:2256223..2256362Blg00210.4-exon-Sc0000026-1570713199:2256223..2256362Branchiostoma lanceolatumexon
Blg00210.4-exon-Sc0000026-1570713199:2255184..2255283Blg00210.4-exon-Sc0000026-1570713199:2255184..2255283Branchiostoma lanceolatumexon
Blg00210.4-exon-Sc0000026-1570713199:2253987..2254339Blg00210.4-exon-Sc0000026-1570713199:2253987..2254339Branchiostoma lanceolatumexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Sc0000026genomeSc0000026:2253987..2261962 -
Properties
Property NameValue
GeneIDBlg00210