|
|
Sequence
The following sequences are available for this feature:
mRNA from alignment at Sc0000026:2253987..2262159- Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >Blg00210.3 ID=Blg00210.3|Name=Blg00210.3|organism=Branchiostoma lanceolatum|type=mRNA|length=8173bp|location=Sequence derived from alignment at Sc0000026:2253987..2262159- (Branchiostoma lanceolatum)
TTGTTCAAGGACGGAACCTGACGGTCATCGAGTTTTCGGACAACCCTGGA
ACCCACGAACCAGGTGAGATTTCTTAAAGTTTTATTTTTTACAAGGGCGG
AACCTGACAGTCATCGAGTTTTCGGACAACCCTGGAGTCCACGAACCAGG
TGAGATTTCTTCAAGTTTTATTTTGTACAAGGATGGAACCTGACAGCCAT
CGAGTTTTCGGACAACCCTGGAACCCACGAACCAGGTGAGATTTCTTCAA
GTTTTATTTTATACAAGGATGGAACCGGACAGTCATCGAGTTTTCGGACA
ACCCTGGAACCCACGAACCAGGTGAGATATCAGATCATCAAGTTCAAAAA
TGATAGAAAATTTGTGGGGACATTTCTCCAGTTTATAGTTGTCGCAAACT
GATGGCACTTTGGGGATACTAGTGGGATGCATATAATATATGTGTCGTAC
AAAATACTACAGTCTTTTTACGGAAAAGATTGTCTTAAGCCCCAATCTCA
CGGGACCTGCGGCACTTTGGTGACCACGCTGTGACCCAGCGATTTGACAG
CGCGCAAAACAAATTTCATCGATAAAAACGAATCTTTTTTACGCCCTGTA
TGCTTTGTTGTCTTTTTAGTCATACTTGTACGTTTTGCATGATGTTCCCA
TCATAAAAAATCAAAGTCAAGGGTAACACAAATCCAACTTACGACACAGC
GAGGCCGTCAACGCGCTAAGGGTCCGGTAAGATGGTTGGCTTAAATCCCC
GTGTCAGTGGTTTGTTTTGCCACAACGTGCTTAACTGCTAATTAAATATC
GGAACGAAGCAAAGAAAAAGACTATTAGAGCCTACCGCAAGAACAAGAAT
GACATTTGTTTCTTCCATCAAAAGAAATCAGTTCAACAATCACATGTATT
TCAGTACAACTGGTTTTCTTTTTGTTATCAATGACATTTCATCGAGCCAA
GCTTGCACGACTTTAAAGGTTTATACTAGACGTATACAAGGATTTGTCGC
TTTTTCTTGACCAGACCTCCTAATGTAAACATGCAAGGGGTCCGGAAATC
AGAAGCCAAGAAAATCCATGGAGTGCTGATTTGAAATTTACATTGTAAAT
TTGGTCTGTGGTGTAAACGGTAGGGCATATTCACTTCCGGTTTTCCCACC
ACAGGCGAACCGGAAGTCAAGTACGTGGCCAACATGCATGGGAACGAGGT
GACCGGACGAGAGATGCTACTCCTCTTCATGCAGTATCTCTGTAACAGGT
AGGCATGAATATTCATCTTAATAGCAAGAAACGAAATGTACGAAGCTTCA
TCAGAATCGTATGTCAGAGGAAAATGAATGTTCTTGTGATAACGCCTAGA
GAAAATTTAACTTGCCGACGTTTCAGAGAAGAAAACAAACGTAAATTTTC
GCTTGGACAGCATTTCTTAGCAGCGACACCTAGTTTCCAGAACCAGCCAG
AATTGGTCCGAGTAAGGTGACAGACGTTTACCGAAGCGTCGATCTTCAAC
AAACTTTGTTGTGTATGATTTCTAACTTTATCATCACTTATAATCCCCAA
CCTGATGAAAATGTTCGCGGAAAAAGGCTTTCTGTATATGAGAAAGTTTA
CACTAGTCATTAAAAAAGATGTCGGGGACATACACTCAGTAACGTTTGGG
ACCATATTCCTGCCGCAACAACGCCACCATGCGGCAAGGAGTAGTACAAG
CCATTCAGGCTCTGAGAAAGTTAGCTGAGTACTTGTATACCTAAACGTGG
GCAAGCTTGATTTTCTCTAGCTTTAAGTTGTGTCAAAAGAAATTTTCTTA
AAATGAAATGTACCTCTTCATATGAGCAGAAAAGCAACTGATATAATTGT
AATGTAATTTTCACATTGATTAGTTAGCAGAAAAAACAATGACAGACATG
AAGCAGTCTGACACAGTACCTCACGACAAATGGGATATGTAGAACAATCA
TTTTGCTATAAATATGAGTTTAAGACTGTTTTTTCTTACTCAAAGTTATA
CTCTGAACACATCCTCAAGTTTTAAAAGCGTCTGGCGAGTGAAGCGACTG
ATCAAATCCACCAGAATCCACATCCTCGCCTCCATGAACCCAGACGGATA
CGAAATAGCAGCAAGGAAGGTAAGGGTCTGTTTCAAAGTCATAAACTATC
TCGTATGTTGCTGCCTTCGCCGTAGGCAGAAGGTTATATTTTTGATCGGA
ATTTGAGGAGCGATGGTGCTGGCGATATAACGGATGTTAGGGGTGTTGGT
GAGATTTGGTAGGTAAGCTACTGTTGGGGAGACAAAATTCAAGGTCGAAG
ATGGGCCTTCTGGCGTTTTTTTCAGTGATGCAGTGGACCTTTTGTGTTTG
TTTGTTTGTTTGTTGGCGTTATAACTCGATAGCCATTGAATGGATCGTGA
TGAAATTTAGTAGGTTGGTGGGGATTGGGAAAATGAAGGTCAAGTTCGAT
AATGAGCAGTACCGCAGCGGGACTTCAAAGTTTTTGAGTTCAAGTTCTGG
ATGTGCTATGGTAGTGATTTTTGAGTGGTGGATAGCTCTTGTTATTATTG
TGAACACAAGGCAAACAAGCAAACATCTTTCAAATTTTCTTTCGACGTTG
AACTGTAATTTTCAAGACAGTATACAACATATACGTTCCAGATCGAAGAC
AAAGGAAAATATTAATTATGATCCTGCATCTTTTTTACAGCCCTTGATCA
TATTGAGGTATTTTCTTTGGATGAATAAATGATTTGGAAGATCTTAGAAG
AAAGGCAATTTGAAATTAGTATGATGTGCAAAGATTGGAGACATCGCGGA
GACTTTTTTTGTGTTTATTTTTGAATAACTTATTTATTTCAAAATTGTGT
AGATGACAACATGTTTGTTTTGTATGTGCCTAACACAAGCTAGCTTTTAG
ATATCAACATAAGTTTAAACTATATAAGTTCGCGGCAGCGCTATAGACAA
ATACCGATACAGTATTGGGCAAAATGTTTGAGATGGCTTTAAGTTCGCCG
CGAACATAACGCCACCGCGAACATATCTGCATTTACAGTAATAACGCTTG
TACTGTTCACTCTGTTAGGGTCCAGGTAACGTCTGGAGTAATGGTCGTGA
GAACGTCCAGGGCATCGACCTCAACAGAAACTTCCCAGCACTCAACACCA
TTGCCTACAAAAGCGAGCAACATGGCGGCCCTACTGACCACATCCCAATT
CCAAACAGCTACTGGAAAGGGGTACGTGTTCGTTCGTTCGATCCTTCCTT
CGATCCTTCCTTCGATCCTTCGATCCTTCGATCCTTCCTTCCTTCCTTCC
TTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTT
CCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCC
TTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTT
CCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCC
TTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTT
CCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCC
TTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTT
CCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCC
TTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTT
CCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCC
TTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTT
CCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCC
TTCCTTCCAGGCGAGCGGGGATGCAAACCCAGTCACGTTTAGGACTGCAT
TCTCGCCGCAGCGCCCCCTAGTGGCGAAAAGTATAGCTCCAATCATTTTT
GCCGCGCGCAAGGCAACAAAAGTACTTCTAAACCTTTGGCAGGTAGTTGT
CTTTTGGCTGTTTGTAATGAATTTTGATTTCTTGTTCCTTGTACAGAATG
TGGCCCCAGAAACGGAGGCAGTCATCAGATGGATAAAACAGTATCCGTTT
GTCATCAGCGCCAATTTACACGACGGAGCACTGTTAGCAAATTACCCTTA
CGACCAAAGTAAAGGTATTGTATTCTTAGTCTGACCCGTCTCATTTTTAA
CCCTAAAAGTTTCAACGGTCTGAAGGAAAGAGAAACTAATTTCACAAATA
TAAATTGGTGCACGCCATACCTCTTGAAGGTAGCAAAGTGCGTATTTACT
GCATGGAGGATACGTACATTTATACGATCACAGTTGAAGAACTGCAGAAA
CTTTTGGGAAATACAGAAGTTTAAAGTTATGTAAAACATGGATGGATCCT
GTATCAGTTGACTCTATATAGATAGAAATGCAAATCAACCTGGCTCAGAT
GCTTGTGTATATTCACTGTTTTGTAATAAGGTTCAATACACGAGTTTCCA
GTTTCACGCCGCCATTTTAGGTCAAAGGTCAAATGGCGGCGCAAAACTGG
AAACTCGTGCACAACAAAATTCCAAAACAAACGGATTACTTTTACGTTGA
TGAAGGATGGCGGATGTTGTCTAAAATGTCTGTTTTTGAAATCTCGTCCA
GGTGCTTGTGAGTAATTGCATTTGGCAGATTACTTTAACCTTTTTTTTCA
GTTGCATCCGATACGCCCATTCGCGGTTCTTATTACGCATGTGCAGTGTC
AAGGGTGAAGGTCCCCGGCTTGTAAACAGTTCTAATCATTGTCTAGATTT
GCATAACAACGTCCAGACGGGTTTTGTTTGCGTCTCAGGGGTCTTTACCT
TTGGCAATGCACATGCGCAGTCGGAACTGCGAATGGGCTTATAGTACACC
GTTGTTAATCATTGTAGCCGATCAAAGTATGCCTCTCTTGATCATTAGGC
GGCTCGCAGCGTGGTGTCTACGCTCGTTCCCCCGATGATGCCGTCTTCCG
TCAGATTGCCGCTTCCTACGCTAACGCTCACAGGACAATGTCACTGCCAG
ACTCGGGCTGCCAACGGCACTCGGATTTTGGCAGCCAAGGCGGCATCACA
AACGGAGCCGCTTGGTATTCGGTCGCTGGCGGTACGTATGTAAGGCTACA
AAAGACGTAAATAGAGTCTATTCCCAGTCACCAAGAGGGTTTTATGATAA
TATTTGTAATAATTTTGAAAAATATCTAATATAAGAAATTCTGACTGACA
ATTGTTCCAATTTCTTTTCTAAAAAATTGAATATTAAGAATTTAGAATTG
ATTTGAATTCAATTAGGTAATTTACACAAATGATTACAATAAATTGAAAA
TATTTCTAAATTATAAAAATAACAACCCTTGCGGTGACTATTCAGATCAA
TAAGATTTATAATGGTATATCAATAAGCTATACATCAATACGATGTATCG
CCTCGAGATGGATATGGTGATATAAGGCCTGGTTGGGCTCTAATAGCACT
AAATAAACCATCGGGTGAGCGAAGCAACCGAGGTGGTTTATGAGTTGGCT
AGAGGGACCAAAGAGGCATTAATTGTGTCAGCATATACCCAGAGGAAAAG
GGTGTAATGTTATCCTCATATAGCCTGTTATTAAACATTCTTCCTGTAAA
TTATAACCTTGCTTCTAGTCTCCTTAATGAAATACAAGGGGAAGTACGTG
ATAAAAGAGAATAATCAGCATCTACACATTTTTTACACTGTTTCCAGGAA
TGCAAGATTTTAACTACCTTCACACAAACTGTTTCGAAATCACTCTGGAA
CTGTCGTGCGACAAATTCCCGCCAGAAGGCGCTCTTCCGACAGAGTGGAG
AAACAACAGGAAGGCGCTGCTTGCTTACATCGAGGAGGTAAAACAGCTTT
TATTACCTCCGTGAAAACAGAGGTATTGTTATGTAGTTGGTGTGCTTGTC
TTGGTTTGAGCTCTGAATAATGCAGAGTAACAGCAAATCGTGAGGTCTTG
TGGCGTTACGGCAGGGTGTTCAGCGGTCCCGGGTTCGAATCCCCTAAACG
CCACCGATGTTTTACCCTCGGGAAAGGCACTTTGCACTAGCCTCTACCAG
GCTCCGCTGATCGCTGGGAAAATAGTAGAAATCGGCCAAATAGAGTGAAT
GGTATGTCCTTGGCCAAGGGTAGTCCGCTATGCAGGGAAGGTCAATAAGC
GACCAACGGAGCCTGTCTGGAGTCGGCATCTCGTTTGAGGTCCACTAATC
GCTATCGAATAGGTACTAGGTGCGAAGTAGCTAAATACTCCTTTTATTGC
TTTCCGACTCGTCCGTGACGGCCCTGACAGGAGCGGCCCATCAGCGAACA
TGTGACAGGAAGTGTCAGAGGTTGCGATAGTTTCAAAACATAATGGTCCA
GTCCAGTGCCCTATATCGTAGTTTCTGCGACATTTTTTGTGCATTAAATG
CATTTACCGTATCAATTGGAATGGATGTTACAAGGGAGATTCATGCTAGG
GTCACATTTCCAAGCCGGGAACTACAGCATCTATGTTCAGTTCCGAAGTA
ATGAGCGGAGAAACCAAAACATTCACGCTTTCAGTAAATGCATTTCATAT
TGAAATCGCACCATGCCGCTCTTGACTGTAACTTCAGATCCACTGCTTAA
GGAAACAAATAACAAAAAAATGAAAGTCAGAGGCTAGATCCTAACTCCGA
TAGAATCTTCTTTACTCAACAATGGTGTTTGTCCAGGTGGACTAACTTGT
AGAAAAGTTATGTCAACTTAGATATTTCATGTAGCATCAGCTCGTACATG
GTCTATATAATATATATTTTCCACAGGCTCACAAAGGCATAAAGGGCTTC
GTATTGGACCGTAACCTTGATCCAATTAAGGGAGCGACCATTCACGTGGA
CGGGATCAATCATGACGTCACAACAGGTAGGTGTCAGTAGTTAGCAGTGC
CAGCAACATTACTAGAAACAACTGTATGATAGACTGGGAGGGCCTAGGGG
GAAAGGTGATAGAAAGAGAGGGCACACACAGTGGTTTAGGGTGGTTATCT
GATTTAGAAAATCTACAGCCTTGAACCAAGGAGGTTATATAACCTCCTTG
CTCGAACCGAGACGAGAGGGACAGAGACATTACGTCATATGTTTGGAACC
GCATTATTTTTTTTTGTTATAACACCCCCATGCGGTAAGTAGTGGCAGTG
CACCCAGATGAAGGGAGCAAAAACGTCAATATGAGGAAATTGACCGTGGT
TAAGGGTTGTGATAAAAGAAATTCGCTTGGAAAATGACATACAAAGCTAT
GTGGTGTTTCCATGGCATAAGTTTCATGACATTAGTTTTATGCAAAGTTG
CATATAGCTCCCCATGTATGAAGATAGGCTAACATTAACTTTCTGTCAAA
ATTTGACTAATAACACTGGTAAGCTAAGGTTTTATAGGACATGCAAAACA
ACTTATAATTATACCATGGAAAATATTTAGAATTAGATAACGTTGATTTA
CGCTCTGCTTTTAGCAAAATTAGAACTAGTGCCCATCCCCTTGAAATTGA
GAAAGGTCGGTACAAGAACTTACTTGTGTGCGAAAGAACTTGAATAAGAA
CTAAGTTAGAACTTAGTGTCAGTAGCTAAGACTAGAGTAGTCATATGTTA
TATTGTTCGTCATTTTCTATCCGTCCACTCCGTGTTACATGTACATGTAC
TTGCATTTAGCCTACGGGCAGGAATTTGCAATAAACTTTCATTATGATTA
ACGTGCTTTGTCGCTTGCAGCAAACGACGGTGACTTCTGGAGAATGCTGG
TCCCTGGTACATACACTGTCACTGCCTCTTACAATGGCATGACCAGAATC
AAACAAGTGACGGTCTCCACTAATAGAGCACGTACTCTGAACTTCATCTT
GGATGACTAAGGAAAAACGCGTGTGGCTTCCTATACTCGTAAAACCAAGA
CGATCTGTACCTAATGAAAATCCCGTTTCAAGCTTAAAGCACCCGTTTTA
CTTCTTGAGAAACAAGAGAAGATGTTTTGGGTTCAAACAATATTTACAAT
TACAAGACTTGTACAAGTTTTGGGTTAACTGTCAGTTGATACCTTATACA
TGTATACTTAATACATATTCAAC Coding sequence (CDS) from alignment at Sc0000026:2253987..2262159- >Blg00210.3 ID=Blg00210.3|Name=Blg00210.3|organism=Branchiostoma lanceolatum|type=CDS|length=999bp|location=Sequence derived from alignment at Sc0000026:2253987..2262159- (Branchiostoma lanceolatum)
ATGCATGGGAACGAGGTGACCGGACGAGAGATGCTACTCCTCTTCATGCA
GTATCTCTGTAACAGTTTTAAAAGCGTCTGGCGAGTGAAGCGACTGATCA
AATCCACCAGAATCCACATCCTCGCCTCCATGAACCCAGACGGATACGAA
ATAGCAGCAAGGAAGGGTCCAGGTAACGTCTGGAGTAATGGTCGTGAGAA
CGTCCAGGGCATCGACCTCAACAGAAACTTCCCAGCACTCAACACCATTG
CCTACAAAAGCGAGCAACATGGCGGCCCTACTGACCACATCCCAATTCCA
AACAGCTACTGGAAAGGGAATGTGGCCCCAGAAACGGAGGCAGTCATCAG
ATGGATAAAACAGTATCCGTTTGTCATCAGCGCCAATTTACACGACGGAG
CACTGTTAGCAAATTACCCTTACGACCAAAGTAAAGGCGGCTCGCAGCGT
GGTGTCTACGCTCGTTCCCCCGATGATGCCGTCTTCCGTCAGATTGCCGC
TTCCTACGCTAACGCTCACAGGACAATGTCACTGCCAGACTCGGGCTGCC
AACGGCACTCGGATTTTGGCAGCCAAGGCGGCATCACAAACGGAGCCGCT
TGGTATTCGGTCGCTGGCGGAATGCAAGATTTTAACTACCTTCACACAAA
CTGTTTCGAAATCACTCTGGAACTGTCGTGCGACAAATTCCCGCCAGAAG
GCGCTCTTCCGACAGAGTGGAGAAACAACAGGAAGGCGCTGCTTGCTTAC
ATCGAGGAGGCTCACAAAGGCATAAAGGGCTTCGTATTGGACCGTAACCT
TGATCCAATTAAGGGAGCGACCATTCACGTGGACGGGATCAATCATGACG
TCACAACAGCAAACGACGGTGACTTCTGGAGAATGCTGGTCCCTGGTACA
TACACTGTCACTGCCTCTTACAATGGCATGACCAGAATCAAACAAGTGAC
GGTCTCCACTAATAGAGCACGTACTCTGAACTTCATCTTGGATGACTAA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| Blg00210.3-exon-Sc0000026-1570713199:2262097..2262159 | Blg00210.3-exon-Sc0000026-1570713199:2262097..2262159 | Branchiostoma lanceolatum | exon |
| Blg00210.3-exon-Sc0000026-1570713199:2260912..2261005 | Blg00210.3-exon-Sc0000026-1570713199:2260912..2261005 | Branchiostoma lanceolatum | exon |
| Blg00210.3-exon-Sc0000026-1570713199:2260041..2260140 | Blg00210.3-exon-Sc0000026-1570713199:2260041..2260140 | Branchiostoma lanceolatum | exon |
| Blg00210.3-exon-Sc0000026-1570713199:2258939..2259091 | Blg00210.3-exon-Sc0000026-1570713199:2258939..2259091 | Branchiostoma lanceolatum | exon |
| Blg00210.3-exon-Sc0000026-1570713199:2257946..2258063 | Blg00210.3-exon-Sc0000026-1570713199:2257946..2258063 | Branchiostoma lanceolatum | exon |
| Blg00210.3-exon-Sc0000026-1570713199:2256979..2257161 | Blg00210.3-exon-Sc0000026-1570713199:2256979..2257161 | Branchiostoma lanceolatum | exon |
| Blg00210.3-exon-Sc0000026-1570713199:2256223..2256362 | Blg00210.3-exon-Sc0000026-1570713199:2256223..2256362 | Branchiostoma lanceolatum | exon |
| Blg00210.3-exon-Sc0000026-1570713199:2255184..2255283 | Blg00210.3-exon-Sc0000026-1570713199:2255184..2255283 | Branchiostoma lanceolatum | exon |
| Blg00210.3-exon-Sc0000026-1570713199:2253987..2254339 | Blg00210.3-exon-Sc0000026-1570713199:2253987..2254339 | Branchiostoma lanceolatum | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| Sc0000026 | genome | Sc0000026:2253987..2262159 - |
Properties
| Property Name | Value |
|---|
| GeneID | Blg00210 |
|
