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Sequence
The following sequences are available for this feature:
mRNA from alignment at Sc0000026:2253987..2261882- Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >Blg00210.2 ID=Blg00210.2|Name=Blg00210.2|organism=Branchiostoma lanceolatum|type=mRNA|length=7896bp|location=Sequence derived from alignment at Sc0000026:2253987..2261882- (Branchiostoma lanceolatum)
GACAGTCATCGAGTTTTCGGACAACCCTGGAACCCACGAACCAGGTGAGA
TATCAGATCATCAAGTTCAAAAATGATAGAAAATTTGTGGGGACATTTCT
CCAGTTTATAGTTGTCGCAAACTGATGGCACTTTGGGGATACTAGTGGGA
TGCATATAATATATGTGTCGTACAAAATACTACAGTCTTTTTACGGAAAA
GATTGTCTTAAGCCCCAATCTCACGGGACCTGCGGCACTTTGGTGACCAC
GCTGTGACCCAGCGATTTGACAGCGCGCAAAACAAATTTCATCGATAAAA
ACGAATCTTTTTTACGCCCTGTATGCTTTGTTGTCTTTTTAGTCATACTT
GTACGTTTTGCATGATGTTCCCATCATAAAAAATCAAAGTCAAGGGTAAC
ACAAATCCAACTTACGACACAGCGAGGCCGTCAACGCGCTAAGGGTCCGG
TAAGATGGTTGGCTTAAATCCCCGTGTCAGTGGTTTGTTTTGCCACAACG
TGCTTAACTGCTAATTAAATATCGGAACGAAGCAAAGAAAAAGACTATTA
GAGCCTACCGCAAGAACAAGAATGACATTTGTTTCTTCCATCAAAAGAAA
TCAGTTCAACAATCACATGTATTTCAGTACAACTGGTTTTCTTTTTGTTA
TCAATGACATTTCATCGAGCCAAGCTTGCACGACTTTAAAGGTTTATACT
AGACGTATACAAGGATTTGTCGCTTTTTCTTGACCAGACCTCCTAATGTA
AACATGCAAGGGGTCCGGAAATCAGAAGCCAAGAAAATCCATGGAGTGCT
GATTTGAAATTTACATTGTAAATTTGGTCTGTGGTGTAAACGGTAGGGCA
TATTCACTTCCGGTTTTCCCACCACAGGCGAACCGGAAGTCAAGTACGTG
GCCAACATGCATGGGAACGAGGTGACCGGACGAGAGATGCTACTCCTCTT
CATGCAGTATCTCTGTAACAGGTAGGCATGAATATTCATCTTAATAGCAA
GAAACGAAATGTACGAAGCTTCATCAGAATCGTATGTCAGAGGAAAATGA
ATGTTCTTGTGATAACGCCTAGAGAAAATTTAACTTGCCGACGTTTCAGA
GAAGAAAACAAACGTAAATTTTCGCTTGGACAGCATTTCTTAGCAGCGAC
ACCTAGTTTCCAGAACCAGCCAGAATTGGTCCGAGTAAGGTGACAGACGT
TTACCGAAGCGTCGATCTTCAACAAACTTTGTTGTGTATGATTTCTAACT
TTATCATCACTTATAATCCCCAACCTGATGAAAATGTTCGCGGAAAAAGG
CTTTCTGTATATGAGAAAGTTTACACTAGTCATTAAAAAAGATGTCGGGG
ACATACACTCAGTAACGTTTGGGACCATATTCCTGCCGCAACAACGCCAC
CATGCGGCAAGGAGTAGTACAAGCCATTCAGGCTCTGAGAAAGTTAGCTG
AGTACTTGTATACCTAAACGTGGGCAAGCTTGATTTTCTCTAGCTTTAAG
TTGTGTCAAAAGAAATTTTCTTAAAATGAAATGTACCTCTTCATATGAGC
AGAAAAGCAACTGATATAATTGTAATGTAATTTTCACATTGATTAGTTAG
CAGAAAAAACAATGACAGACATGAAGCAGTCTGACACAGTACCTCACGAC
AAATGGGATATGTAGAACAATCATTTTGCTATAAATATGAGTTTAAGACT
GTTTTTTCTTACTCAAAGTTATACTCTGAACACATCCTCAAGTTTTAAAA
GCGTCTGGCGAGTGAAGCGACTGATCAAATCCACCAGAATCCACATCCTC
GCCTCCATGAACCCAGACGGATACGAAATAGCAGCAAGGAAGGTAAGGGT
CTGTTTCAAAGTCATAAACTATCTCGTATGTTGCTGCCTTCGCCGTAGGC
AGAAGGTTATATTTTTGATCGGAATTTGAGGAGCGATGGTGCTGGCGATA
TAACGGATGTTAGGGGTGTTGGTGAGATTTGGTAGGTAAGCTACTGTTGG
GGAGACAAAATTCAAGGTCGAAGATGGGCCTTCTGGCGTTTTTTTCAGTG
ATGCAGTGGACCTTTTGTGTTTGTTTGTTTGTTTGTTGGCGTTATAACTC
GATAGCCATTGAATGGATCGTGATGAAATTTAGTAGGTTGGTGGGGATTG
GGAAAATGAAGGTCAAGTTCGATAATGAGCAGTACCGCAGCGGGACTTCA
AAGTTTTTGAGTTCAAGTTCTGGATGTGCTATGGTAGTGATTTTTGAGTG
GTGGATAGCTCTTGTTATTATTGTGAACACAAGGCAAACAAGCAAACATC
TTTCAAATTTTCTTTCGACGTTGAACTGTAATTTTCAAGACAGTATACAA
CATATACGTTCCAGATCGAAGACAAAGGAAAATATTAATTATGATCCTGC
ATCTTTTTTACAGCCCTTGATCATATTGAGGTATTTTCTTTGGATGAATA
AATGATTTGGAAGATCTTAGAAGAAAGGCAATTTGAAATTAGTATGATGT
GCAAAGATTGGAGACATCGCGGAGACTTTTTTTGTGTTTATTTTTGAATA
ACTTATTTATTTCAAAATTGTGTAGATGACAACATGTTTGTTTTGTATGT
GCCTAACACAAGCTAGCTTTTAGATATCAACATAAGTTTAAACTATATAA
GTTCGCGGCAGCGCTATAGACAAATACCGATACAGTATTGGGCAAAATGT
TTGAGATGGCTTTAAGTTCGCCGCGAACATAACGCCACCGCGAACATATC
TGCATTTACAGTAATAACGCTTGTACTGTTCACTCTGTTAGGGTCCAGGT
AACGTCTGGAGTAATGGTCGTGAGAACGTCCAGGGCATCGACCTCAACAG
AAACTTCCCAGCACTCAACACCATTGCCTACAAAAGCGAGCAACATGGCG
GCCCTACTGACCACATCCCAATTCCAAACAGCTACTGGAAAGGGGTACGT
GTTCGTTCGTTCGATCCTTCCTTCGATCCTTCCTTCGATCCTTCGATCCT
TCGATCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTC
CTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCT
TCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTC
CTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCT
TCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTC
CTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCT
TCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTC
CTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCT
TCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTC
CTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCT
TCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTC
CTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCT
TCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCAGGCGAGCGGGGATGCAAA
CCCAGTCACGTTTAGGACTGCATTCTCGCCGCAGCGCCCCCTAGTGGCGA
AAAGTATAGCTCCAATCATTTTTGCCGCGCGCAAGGCAACAAAAGTACTT
CTAAACCTTTGGCAGGTAGTTGTCTTTTGGCTGTTTGTAATGAATTTTGA
TTTCTTGTTCCTTGTACAGAATGTGGCCCCAGAAACGGAGGCAGTCATCA
GATGGATAAAACAGTATCCGTTTGTCATCAGCGCCAATTTACACGACGGA
GCACTGTTAGCAAATTACCCTTACGACCAAAGTAAAGGTATTGTATTCTT
AGTCTGACCCGTCTCATTTTTAACCCTAAAAGTTTCAACGGTCTGAAGGA
AAGAGAAACTAATTTCACAAATATAAATTGGTGCACGCCATACCTCTTGA
AGGTAGCAAAGTGCGTATTTACTGCATGGAGGATACGTACATTTATACGA
TCACAGTTGAAGAACTGCAGAAACTTTTGGGAAATACAGAAGTTTAAAGT
TATGTAAAACATGGATGGATCCTGTATCAGTTGACTCTATATAGATAGAA
ATGCAAATCAACCTGGCTCAGATGCTTGTGTATATTCACTGTTTTGTAAT
AAGGTTCAATACACGAGTTTCCAGTTTCACGCCGCCATTTTAGGTCAAAG
GTCAAATGGCGGCGCAAAACTGGAAACTCGTGCACAACAAAATTCCAAAA
CAAACGGATTACTTTTACGTTGATGAAGGATGGCGGATGTTGTCTAAAAT
GTCTGTTTTTGAAATCTCGTCCAGGTGCTTGTGAGTAATTGCATTTGGCA
GATTACTTTAACCTTTTTTTTCAGTTGCATCCGATACGCCCATTCGCGGT
TCTTATTACGCATGTGCAGTGTCAAGGGTGAAGGTCCCCGGCTTGTAAAC
AGTTCTAATCATTGTCTAGATTTGCATAACAACGTCCAGACGGGTTTTGT
TTGCGTCTCAGGGGTCTTTACCTTTGGCAATGCACATGCGCAGTCGGAAC
TGCGAATGGGCTTATAGTACACCGTTGTTAATCATTGTAGCCGATCAAAG
TATGCCTCTCTTGATCATTAGGCGGCTCGCAGCGTGGTGTCTACGCTCGT
TCCCCCGATGATGCCGTCTTCCGTCAGATTGCCGCTTCCTACGCTAACGC
TCACAGGACAATGTCACTGCCAGACTCGGGCTGCCAACGGCACTCGGATT
TTGGCAGCCAAGGCGGCATCACAAACGGAGCCGCTTGGTATTCGGTCGCT
GGCGGTACGTATGTAAGGCTACAAAAGACGTAAATAGAGTCTATTCCCAG
TCACCAAGAGGGTTTTATGATAATATTTGTAATAATTTTGAAAAATATCT
AATATAAGAAATTCTGACTGACAATTGTTCCAATTTCTTTTCTAAAAAAT
TGAATATTAAGAATTTAGAATTGATTTGAATTCAATTAGGTAATTTACAC
AAATGATTACAATAAATTGAAAATATTTCTAAATTATAAAAATAACAACC
CTTGCGGTGACTATTCAGATCAATAAGATTTATAATGGTATATCAATAAG
CTATACATCAATACGATGTATCGCCTCGAGATGGATATGGTGATATAAGG
CCTGGTTGGGCTCTAATAGCACTAAATAAACCATCGGGTGAGCGAAGCAA
CCGAGGTGGTTTATGAGTTGGCTAGAGGGACCAAAGAGGCATTAATTGTG
TCAGCATATACCCAGAGGAAAAGGGTGTAATGTTATCCTCATATAGCCTG
TTATTAAACATTCTTCCTGTAAATTATAACCTTGCTTCTAGTCTCCTTAA
TGAAATACAAGGGGAAGTACGTGATAAAAGAGAATAATCAGCATCTACAC
ATTTTTTACACTGTTTCCAGGAATGCAAGATTTTAACTACCTTCACACAA
ACTGTTTCGAAATCACTCTGGAACTGTCGTGCGACAAATTCCCGCCAGAA
GGCGCTCTTCCGACAGAGTGGAGAAACAACAGGAAGGCGCTGCTTGCTTA
CATCGAGGAGGTAAAACAGCTTTTATTACCTCCGTGAAAACAGAGGTATT
GTTATGTAGTTGGTGTGCTTGTCTTGGTTTGAGCTCTGAATAATGCAGAG
TAACAGCAAATCGTGAGGTCTTGTGGCGTTACGGCAGGGTGTTCAGCGGT
CCCGGGTTCGAATCCCCTAAACGCCACCGATGTTTTACCCTCGGGAAAGG
CACTTTGCACTAGCCTCTACCAGGCTCCGCTGATCGCTGGGAAAATAGTA
GAAATCGGCCAAATAGAGTGAATGGTATGTCCTTGGCCAAGGGTAGTCCG
CTATGCAGGGAAGGTCAATAAGCGACCAACGGAGCCTGTCTGGAGTCGGC
ATCTCGTTTGAGGTCCACTAATCGCTATCGAATAGGTACTAGGTGCGAAG
TAGCTAAATACTCCTTTTATTGCTTTCCGACTCGTCCGTGACGGCCCTGA
CAGGAGCGGCCCATCAGCGAACATGTGACAGGAAGTGTCAGAGGTTGCGA
TAGTTTCAAAACATAATGGTCCAGTCCAGTGCCCTATATCGTAGTTTCTG
CGACATTTTTTGTGCATTAAATGCATTTACCGTATCAATTGGAATGGATG
TTACAAGGGAGATTCATGCTAGGGTCACATTTCCAAGCCGGGAACTACAG
CATCTATGTTCAGTTCCGAAGTAATGAGCGGAGAAACCAAAACATTCACG
CTTTCAGTAAATGCATTTCATATTGAAATCGCACCATGCCGCTCTTGACT
GTAACTTCAGATCCACTGCTTAAGGAAACAAATAACAAAAAAATGAAAGT
CAGAGGCTAGATCCTAACTCCGATAGAATCTTCTTTACTCAACAATGGTG
TTTGTCCAGGTGGACTAACTTGTAGAAAAGTTATGTCAACTTAGATATTT
CATGTAGCATCAGCTCGTACATGGTCTATATAATATATATTTTCCACAGG
CTCACAAAGGCATAAAGGGCTTCGTATTGGACCGTAACCTTGATCCAATT
AAGGGAGCGACCATTCACGTGGACGGGATCAATCATGACGTCACAACAGG
TAGGTGTCAGTAGTTAGCAGTGCCAGCAACATTACTAGAAACAACTGTAT
GATAGACTGGGAGGGCCTAGGGGGAAAGGTGATAGAAAGAGAGGGCACAC
ACAGTGGTTTAGGGTGGTTATCTGATTTAGAAAATCTACAGCCTTGAACC
AAGGAGGTTATATAACCTCCTTGCTCGAACCGAGACGAGAGGGACAGAGA
CATTACGTCATATGTTTGGAACCGCATTATTTTTTTTTGTTATAACACCC
CCATGCGGTAAGTAGTGGCAGTGCACCCAGATGAAGGGAGCAAAAACGTC
AATATGAGGAAATTGACCGTGGTTAAGGGTTGTGATAAAAGAAATTCGCT
TGGAAAATGACATACAAAGCTATGTGGTGTTTCCATGGCATAAGTTTCAT
GACATTAGTTTTATGCAAAGTTGCATATAGCTCCCCATGTATGAAGATAG
GCTAACATTAACTTTCTGTCAAAATTTGACTAATAACACTGGTAAGCTAA
GGTTTTATAGGACATGCAAAACAACTTATAATTATACCATGGAAAATATT
TAGAATTAGATAACGTTGATTTACGCTCTGCTTTTAGCAAAATTAGAACT
AGTGCCCATCCCCTTGAAATTGAGAAAGGTCGGTACAAGAACTTACTTGT
GTGCGAAAGAACTTGAATAAGAACTAAGTTAGAACTTAGTGTCAGTAGCT
AAGACTAGAGTAGTCATATGTTATATTGTTCGTCATTTTCTATCCGTCCA
CTCCGTGTTACATGTACATGTACTTGCATTTAGCCTACGGGCAGGAATTT
GCAATAAACTTTCATTATGATTAACGTGCTTTGTCGCTTGCAGCAAACGA
CGGTGACTTCTGGAGAATGCTGGTCCCTGGTACATACACTGTCACTGCCT
CTTACAATGGCATGACCAGAATCAAACAAGTGACGGTCTCCACTAATAGA
GCACGTACTCTGAACTTCATCTTGGATGACTAAGGAAAAACGCGTGTGGC
TTCCTATACTCGTAAAACCAAGACGATCTGTACCTAATGAAAATCCCGTT
TCAAGCTTAAAGCACCCGTTTTACTTCTTGAGAAACAAGAGAAGATGTTT
TGGGTTCAAACAATATTTACAATTACAAGACTTGTACAAGTTTTGGGTTA
ACTGTCAGTTGATACCTTATACATGTATACTTAATACATATTCAAC Coding sequence (CDS) from alignment at Sc0000026:2253987..2261882- >Blg00210.2 ID=Blg00210.2|Name=Blg00210.2|organism=Branchiostoma lanceolatum|type=CDS|length=999bp|location=Sequence derived from alignment at Sc0000026:2253987..2261882- (Branchiostoma lanceolatum)
ATGCATGGGAACGAGGTGACCGGACGAGAGATGCTACTCCTCTTCATGCA
GTATCTCTGTAACAGTTTTAAAAGCGTCTGGCGAGTGAAGCGACTGATCA
AATCCACCAGAATCCACATCCTCGCCTCCATGAACCCAGACGGATACGAA
ATAGCAGCAAGGAAGGGTCCAGGTAACGTCTGGAGTAATGGTCGTGAGAA
CGTCCAGGGCATCGACCTCAACAGAAACTTCCCAGCACTCAACACCATTG
CCTACAAAAGCGAGCAACATGGCGGCCCTACTGACCACATCCCAATTCCA
AACAGCTACTGGAAAGGGAATGTGGCCCCAGAAACGGAGGCAGTCATCAG
ATGGATAAAACAGTATCCGTTTGTCATCAGCGCCAATTTACACGACGGAG
CACTGTTAGCAAATTACCCTTACGACCAAAGTAAAGGCGGCTCGCAGCGT
GGTGTCTACGCTCGTTCCCCCGATGATGCCGTCTTCCGTCAGATTGCCGC
TTCCTACGCTAACGCTCACAGGACAATGTCACTGCCAGACTCGGGCTGCC
AACGGCACTCGGATTTTGGCAGCCAAGGCGGCATCACAAACGGAGCCGCT
TGGTATTCGGTCGCTGGCGGAATGCAAGATTTTAACTACCTTCACACAAA
CTGTTTCGAAATCACTCTGGAACTGTCGTGCGACAAATTCCCGCCAGAAG
GCGCTCTTCCGACAGAGTGGAGAAACAACAGGAAGGCGCTGCTTGCTTAC
ATCGAGGAGGCTCACAAAGGCATAAAGGGCTTCGTATTGGACCGTAACCT
TGATCCAATTAAGGGAGCGACCATTCACGTGGACGGGATCAATCATGACG
TCACAACAGCAAACGACGGTGACTTCTGGAGAATGCTGGTCCCTGGTACA
TACACTGTCACTGCCTCTTACAATGGCATGACCAGAATCAAACAAGTGAC
GGTCTCCACTAATAGAGCACGTACTCTGAACTTCATCTTGGATGACTAA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| Blg00210.2-exon-Sc0000026-1570713199:2261839..2261882 | Blg00210.2-exon-Sc0000026-1570713199:2261839..2261882 | Branchiostoma lanceolatum | exon |
| Blg00210.2-exon-Sc0000026-1570713199:2260912..2261005 | Blg00210.2-exon-Sc0000026-1570713199:2260912..2261005 | Branchiostoma lanceolatum | exon |
| Blg00210.2-exon-Sc0000026-1570713199:2260041..2260140 | Blg00210.2-exon-Sc0000026-1570713199:2260041..2260140 | Branchiostoma lanceolatum | exon |
| Blg00210.2-exon-Sc0000026-1570713199:2258939..2259091 | Blg00210.2-exon-Sc0000026-1570713199:2258939..2259091 | Branchiostoma lanceolatum | exon |
| Blg00210.2-exon-Sc0000026-1570713199:2257946..2258063 | Blg00210.2-exon-Sc0000026-1570713199:2257946..2258063 | Branchiostoma lanceolatum | exon |
| Blg00210.2-exon-Sc0000026-1570713199:2256979..2257161 | Blg00210.2-exon-Sc0000026-1570713199:2256979..2257161 | Branchiostoma lanceolatum | exon |
| Blg00210.2-exon-Sc0000026-1570713199:2256223..2256362 | Blg00210.2-exon-Sc0000026-1570713199:2256223..2256362 | Branchiostoma lanceolatum | exon |
| Blg00210.2-exon-Sc0000026-1570713199:2255184..2255283 | Blg00210.2-exon-Sc0000026-1570713199:2255184..2255283 | Branchiostoma lanceolatum | exon |
| Blg00210.2-exon-Sc0000026-1570713199:2253987..2254339 | Blg00210.2-exon-Sc0000026-1570713199:2253987..2254339 | Branchiostoma lanceolatum | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| Sc0000026 | genome | Sc0000026:2253987..2261882 - |
Properties
| Property Name | Value |
|---|
| GeneID | Blg00210 |
|
