Blg00206.2 (mRNA) - B. lanceolatum

Overview
NameBlg00206.2
Unique NameBlg00206.2
TypemRNA
OrganismBranchiostoma lanceolatum (Amphioxus)



Sequence
The following sequences are available for this feature:

mRNA from alignment at Sc0000026:1336356..1341686+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>Blg00206.2 ID=Blg00206.2|Name=Blg00206.2|organism=Branchiostoma lanceolatum|type=mRNA|length=5331bp|location=Sequence derived from alignment at Sc0000026:1336356..1341686+ (Branchiostoma lanceolatum)
CCTTGTCGTGATGTCGTATCGGCGTCTTTGTGTGAAGTGAAATCCTTTGG TGAACCCACAAGATGAAAGTAAAACGTTAACTTTCCAGCTTGAAGTTGAG GGTGGAATGGTGCTGGGGCCAAGTTGCCGAGTTACCTGCTGACGCAGTTA TATTCTAGAGGGTATGTGATGTGAATTTGAATACGGGCTATACCATATTG ACGTGTGTGTTAGGGAACGCTGTTTTTAAGAAATTTCTCACCTTGTTGCT CAGAATTCCTTACAAATCTGCAACAAACTTTTATGTTTATGTTTCTTGTG ATTAGACAACAACGTATGTCTTTATTACGTATCGGCGTCATTGCGGAAAG TGAAATCCTTTGGTAAACCCACAAGTTGCAAGTAAAACGTCAATTTTCTA GCTTGAAGTTGAAGATGGATCAGTCTGTGGCCAAGTTGCCAAGTACCTGC TGACGCAGTTATATTTTAAAGGGCGTGTCATGTGAATTTGAATACGGACT GTACCATGTTGACATGTAGGTTTTGGGGAGAGGGGGTCTGCATTTTTAGA AATGCTGTTTTTTTCAGAATTTTCTCACCTTGCTGCTCAGAATTTCTTAC AAATCTGCAACAAAGTTCTATCTTTATATGTTTCTTGTTGTGATTAGACA ATACGAAAAAATGTTTTTGTTGCCATGGCATTTCCTAAAATTATCTTAAC AGTGTATGTTATAACTGGAAACACAGCAACTCTGGTACTATTCTTGATAA CCAGAAAAGATGATGGCTCTTGTGTTTTGCGAAATATTATTGCTATAACT TATACCACAATCTTTTGCATATGCAATGTAAATATATTTCATGGACATCA AAGATATGCATATACTTTACCAGATATTAGACTTCAATGAGATTTGATTT ATTTGGATGTAAAAGAAGTACAGCCATGGCTACCCACCTAGCCAAGGGCT ATTACAAAGGGTTGAACAAGGTACAAAGTAAGGCATCCACTGGTGCATAG ATAAAACTATGAGATAATAGACTGTTTGGCATTGTCATAAACAAGTTTCT TTCATACCGAATAGACTATCCACTTCTCAAGTGTCGTACGTTCTTAACTG ACAATGATTATGGTTTTTATTACATATTTATTACTACGTACTTATTTATT ATTATTTATTACAAAAGATTTAATTCGAACAGATGTGTGACAATTTTGTT TGCTGTAGGAGTTGCGTTGTACAGAATATTGGTATTAGAAACCCGAGTCC GTCTGATGATTGAATACAACATGGCTGATCGACTCGCAAACAAACCACAA TTCTAGAAAGAAACGCGTTGTAGAACTTATGTGCATTTTTACACAAGTCG TGTCACACGAGTAAGGACTGAGCCATTTATTGAGATAAGGGGAGTAATCC TGGTGTGAATTACTGTTTATGCCATACGTTTTTAAATTGCCGAAGTAAAA CCTTTAGGTCTTACCCGGGAAACGGGCTTTGCAGTGAGGATAACGACTTG AAGTTTAAGTTATAGTTAAAGGATCTTAAAGTGTTTTTGAGGTCATTGCT TTTTATGGTTCCACCCTATGAATTCCGAAAGGTTCCACAAGCCAGCGAAC AAACAAGCTTGACAAGTCGTCAAAGGCGCCTGCGCGCGGCTGGACTTCAA AGGCAACAAGCCAATCGCACTCCGAGAATTGCTGGGACTTCCCCAAACTG AGCCTGAGTATACTAGTAAACTCGCGCGGCGCCTATATATACACTTTAAC GCCTGCACGGCATTTGGTACTGCCACTTGTTTGTCGCTTTACGTTGGACA TATATCTCGTTCGTACAGGTAAATAGGAACCGCAAACCACGTTTATTTTC ATTCTGACATTTTCCACTATGTCCCATACTATATCCAGTTAGATTAACGA ATTTTCTGTCTGCCTTTTACAGAACTACACTTTACTGCTGGTGGTTTATT AATCGGCAAGGAACATGGCAGGACTACAGTCAGTGGCGATTACAGCTGAG AAGAACGGTAAGTGTGATCAAATCTCCTCCTAAATTGCGGGAATCATATT TTCCGGTTATGATGTAAAAAAAAATGGCTGAAAGTGGTTTTCAACAAGGT ACTAGTAGTACATTTTTCTAGACAGCTAAATGCGGCTCTTCTTACGTTTA AGGGACAGAGTTGTTTACTTTGGAAATGACCATGAATGAGCGTTCAGGAC AATTCCATTCGTGCCGCACGAATCTTAAATGTTTTGCTGGGATTATGTTC AGATTGAACTCCCATTTACAAATCCTAAGTTTAAAGTAAATTCATCCATC CGTCCTTACGATTTGCCGTTAGCCAAAGTTTGCAAAGTTTATTTCCGACT TTTTTTGTTGAATGAGTGAGTCCAGATAGTTAGCGAATGACCAGTCCAGT CGGCAAAATATTGGCTGAATACACTACCGCAAATGTTCAGGAAGATGTCC CATGTTTACCTGCTAAGTTTTCGTGCTATACACGTTTTTTTCCAGTACTT TTAGAAGGTTAAACGTCGGTGTGTTTGTGTTCATCACGGTTTCAACCCGG CCATCTTGAATATCTAATAGATCATGTACTTGCCATTGTCCAACCATGTT TGCGTAGTGGTGGTACATGTGGTTGAGAAAAAAAGCTTATAGACAGTTAA ACAATTAACATGCATCAAGCACACATGGTCAGGAAATGGCAAATAAATGA TCTAGTATTCAAGATGTCGGTGTGGAACCCGTGATTAGTAGTCACTGTAA TGCTCTTTCACCCTAAATGATTAAGTGCGACAGGCAATGTACATGTACTT CAGCCAGTTTAACTTGGAGCTCTGTGATAGTCTACTATCTGATTAACTCT ATGTTCTTCACAGAGTTGCAGAATGCAACCCCGAAATCGCCTCTGACTGT GCCTTGTGAGAAGTGCGGCCACAACACGCCTGTTCCCGTGATCAACACGA CTGTCAACATCACCAACAACAAGCACTACAACTTCACAGAGTGTCAGAAT GTGCAGTGTGGAGACAACAACTCCATAAGCGTCGGAACTGCAGAGGACTC CTCCGACTATGCAAGCACTGAAGGAAATCTGCAATGTTCTCTGGGCGGTA ACTAGTTGATATTTTTTGGGGAGACATTTACTGAGAAACAAATCACCCGA CAGTGCAATAATCAGAAGATACAATGTGGCAAAAAGGCATTGTATTCCAA GTAAAACTACTGAAACATACCACAAAATGCAAACAACTGAACTTGTAATT AAATGTTTATTGCTTTTGTAGTTATTCTTATGTATAGCTATTGGCTGATT AAAAATCAACAAATATATAACTAAGACTGCCACCTTCGTCCCCAGAAATA AATAAAAAATGACCCCAGCAGCTTTAGGTCAACGGCCTAAGTTGTAACGT TGTTAACCATTAACGCATAGCTAAATCGATTGCTTACTTGTTCAATTTTA CTCTTGTTTGTTCATTCGGTCAGTAATGATAATACCCTACCTGGCACAGC AGTTGATTTCTTTTACTGGTCAAGAGAAAGCTGTTCATGAAACTGGACCG AACTAGTACTTAATCAGATCCTTAAGAAGTTTTTTGCACACATATTTTCA CGTAGATACGCCATGTTCACAGTATTTGATGGTTTAGAAAGCAGTCGGTA GGATTCTTCTTCCCCCATAACATAAGGTACCAGTACCTTGTCGACAATGT TTTTGGTGAACTTTCAAACTGACCGTCCCGTTCTGATTTCCCCATCGTAC CACTGCACGCATCGTCATCATTGTGGAAAGTAGAATCCTCTGGCGAACCG GCAAGATGCGAATCTAGCGTCATGGTGGAAGAAAAACTCTAAGTGGCCAA ATTACAAACTCTGAACACCTTACGCTTACTGTGCTGGTCATGTGACTATG ATCGGGCTATACCATTTGGGAGGAGAGGGCTTATTTTTGCTGTATTACTT TATGAGGCACACAGTATTCTGAACCTAAGCGTTCTGCACTTGATACACAA TGATTTCAGATTATTGAAATGTTTGTGCGACACAACCAAAGGTTAATGTC TAAAAAAAAAACGTTTCGGTTAACCGTATGTAGGTTTGTAACCTCCCTGA GGGCAATATTCGCCGGTTATACCTCATACTGCAGCTAGATGTCGCTGTTG CAGTATACAAATGGTCTCAAGCTGCAGATAAGGGTTCCAAAGTCTTTGGC TGAAAAGTTTACTATCGAGTGCAACTACTTTAAAAATATGTTCAATGGAG CCTGAACGTGGGGGGCAAATAATGAGAAGTTGAATGATATTCAAAATTAA GAGTGGTCTTCATATTGGCCCCATATCTTTGTAAATCGGTGCACATTGTC TAGAATTTAAAAAAAAAGTACACACTATGATTTACTAGTCAGAGACTGTC TCGTACCTGCAGATAAATTGTTGAAGATGGCAAAGTACCATTTCTTAATT GCATGCCCTTCTTTGTTAAAGAAGAAAGAATTATATCAATGTATAAGACT AGTACAGTATAAGACTAGTGCAGAATTGCATGTAGACAGATGTTTCATGA ACTTTATAATAATGTCTGTATGTCTAGACCAATACCTCTATACAAAAAAG AAAACGCGAGAGAACAACTTTACCAACATAATTATGTAGCTGAACACAAT TTTGTAGTAGGCTTGTAACACATCATTGAGTTTTATGGCAATAATGCTTT GGCTTAGAATCTACGTACACGTGTAGATTGTACATGTGTACTAGATAGAG TCAGAAGCCTTAAATATACCTGTTCCGATTGATGTGCAGTAAATTTTGAC TTGACGTTCACTTAATGCAACCTTAGTGTTGTCTGCCTTTTTTGGGTCTT CTAGTCTAAATCCAAATGTTCTCGCTGACCTCCTCCCCCCTAGTGTATAC CTCGTTAACTGTAACAGCTTATATTCATAATGACGAATCATGAAGTGTTG ATTTTGTAATCATAAGCATCGTTTAGTATCTGAATATATTTGAAACAGTA ACTTATACCTGTCAATAATTTTTCTGTTCCTTCCCTGACAGTAGACGTCG CTACCCGCATATCCATACAAGAAATGAATACGACAGAGTCAACTCGGCAA AGGTATACTAAATAGGTCTAATTTTACTTAAAGGTATGGATATGTGTACT ATGTATAGTTGAATGAATGAATGTATGATGGTAAATGATATACCATTAGG AAGGGTATATTGAGATGTTCTTGTCACCTCTTAGCCCTTGTCCCCATACT TAAGTATATTTCTCCAAGTAAACAGATACATGAAAGCATTCCATGCGAAT GCTCATGTTGTACGAAGCAGGAACTGTGTCA

Coding sequence (CDS) from alignment at Sc0000026:1336356..1341686+

>Blg00206.2 ID=Blg00206.2|Name=Blg00206.2|organism=Branchiostoma lanceolatum|type=CDS|length=351bp|location=Sequence derived from alignment at Sc0000026:1336356..1341686+ (Branchiostoma lanceolatum)
ATGGCAGGACTACAGTCAGTGGCGATTACAGCTGAGAAGAACGAGTTGCA
GAATGCAACCCCGAAATCGCCTCTGACTGTGCCTTGTGAGAAGTGCGGCC
ACAACACGCCTGTTCCCGTGATCAACACGACTGTCAACATCACCAACAAC
AAGCACTACAACTTCACAGAGTGTCAGAATGTGCAGTGTGGAGACAACAA
CTCCATAAGCGTCGGAACTGCAGAGGACTCCTCCGACTATGCAAGCACTG
AAGGAAATCTGCAATGTTCTCTGGGCGTAGACGTCGCTACCCGCATATCC
ATACAAGAAATGAATACGACAGAGTCAACTCGGCAAAGGTATACTAAATA
G
Gene-mRNA-Prot
The following exon feature(s) are a part of this mRNA:
Feature NameUnique NameSpeciesType
Blg00206.2-exon-Sc0000026-1570713199:1336356..1338362Blg00206.2-exon-Sc0000026-1570713199:1336356..1338362Branchiostoma lanceolatumexon
Blg00206.2-exon-Sc0000026-1570713199:1339219..1339452Blg00206.2-exon-Sc0000026-1570713199:1339219..1339452Branchiostoma lanceolatumexon
Blg00206.2-exon-Sc0000026-1570713199:1341397..1341686Blg00206.2-exon-Sc0000026-1570713199:1341397..1341686Branchiostoma lanceolatumexon
The following polypeptide feature(s) derives from this mRNA:
Feature NameUnique NameSpeciesType
Blg00206.2Blg00206.2-proteinBranchiostoma lanceolatumpolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Sc0000026genomeSc0000026:1336356..1341686 +
Properties
Property NameValue
GeneIDBlg00206