Blg00206.1 (mRNA) - B. lanceolatum

Overview
NameBlg00206.1
Unique NameBlg00206.1
TypemRNA
OrganismBranchiostoma lanceolatum (Amphioxus)



Sequence
The following sequences are available for this feature:

mRNA from alignment at Sc0000026:1335605..1340286+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>Blg00206.1 ID=Blg00206.1|Name=Blg00206.1|organism=Branchiostoma lanceolatum|type=mRNA|length=4682bp|location=Sequence derived from alignment at Sc0000026:1335605..1340286+ (Branchiostoma lanceolatum)
CTCGGATACATCTGTCTGATCTTGTTTTTTCCAGGTATCGTTTGTTCCAA CATGGAATAGGACGACTTTCGGGTCGGACATCTTATAATCTCCGATGAAA TTTGTAGCGTCTGTTATGGTGTAGGTCAGTTCCTTTGTCACACGTTTAGA TTGGTACATGTCGTACGTTTCTATGCGCTTTGTATTGGAGTCACCCACGA TTAGCAAGTCGAGCGCCATTTGTACGTCTATGTTGTGTTGATGCTATTCA ACTGTTGAGACAGAGAGGCCAGTGACTTCGGTCTTGTCCTGACTGGGAGG CTGTTGTTTTGCTCCTGTTTTGTTTGTCCACGGCGGTTCACACTTCTGTG TTGTTGTTCTACGTACCTATAAACATGAACGAAGAGTTGAATAGCTTACT TATTTGTTCAAACTAAAGGTCCTTCGTGTTTGTTCAGTCTGGCAATAATT ATAAGACCTTAACTGGAAACGCCCAAAGAACGCTTTACTTAAACGATGTT CATGAAAATGATACAGACTCAGAGAAATTCCGTAAGGTTTCCACACAGAC TTTCGCGTAGATACAAGAAGTTCGGAGTCCTGGATAGTTGTCACGGTCAA AAGTAATAGTCCGGTATCACAACAGCACGTAGTTACCTTCTCGGTTGACA AACGTTAACAGAAGAAACAGCCCATTTTGACCACAGTCCTGGTGAACTTT CAAACTTACGGTCCGTTCTCCTGTTCCCAATTTACTCACAACTGCACGTA TCCTTGTCGTGATGTCGTATCGGCGTCTTTGTGTGAAGTGAAATCCTTTG GTGAACCCACAAGATGAAAGTAAAACGTTAACTTTCCAGCTTGAAGTTGA GGGTGGAATGGTGCTGGGGCCAAGTTGCCGAGTTACCTGCTGACGCAGTT ATATTCTAGAGGGTATGTGATGTGAATTTGAATACGGGCTATACCATATT GACGTGTGTGTTAGGGAACGCTGTTTTTAAGAAATTTCTCACCTTGTTGC TCAGAATTCCTTACAAATCTGCAACAAACTTTTATGTTTATGTTTCTTGT GATTAGACAACAACGTATGTCTTTATTACGTATCGGCGTCATTGCGGAAA GTGAAATCCTTTGGTAAACCCACAAGTTGCAAGTAAAACGTCAATTTTCT AGCTTGAAGTTGAAGATGGATCAGTCTGTGGCCAAGTTGCCAAGTACCTG CTGACGCAGTTATATTTTAAAGGGCGTGTCATGTGAATTTGAATACGGAC TGTACCATGTTGACATGTAGGTTTTGGGGAGAGGGGGTCTGCATTTTTAG AAATGCTGTTTTTTTCAGAATTTTCTCACCTTGCTGCTCAGAATTTCTTA CAAATCTGCAACAAAGTTCTATCTTTATATGTTTCTTGTTGTGATTAGAC AATACGAAAAAATGTTTTTGTTGCCATGGCATTTCCTAAAATTATCTTAA CAGTGTATGTTATAACTGGAAACACAGCAACTCTGGTACTATTCTTGATA ACCAGAAAAGATGATGGCTCTTGTGTTTTGCGAAATATTATTGCTATAAC TTATACCACAATCTTTTGCATATGCAATGTAAATATATTTCATGGACATC AAAGATATGCATATACTTTACCAGATATTAGACTTCAATGAGATTTGATT TATTTGGATGTAAAAGAAGTACAGCCATGGCTACCCACCTAGCCAAGGGC TATTACAAAGGGTTGAACAAGGTACAAAGTAAGGCATCCACTGGTGCATA GATAAAACTATGAGATAATAGACTGTTTGGCATTGTCATAAACAAGTTTC TTTCATACCGAATAGACTATCCACTTCTCAAGTGTCGTACGTTCTTAACT GACAATGATTATGGTTTTTATTACATATTTATTACTACGTACTTATTTAT TATTATTTATTACAAAAGATTTAATTCGAACAGATGTGTGACAATTTTGT TTGCTGTAGGAGTTGCGTTGTACAGAATATTGGTATTAGAAACCCGAGTC CGTCTGATGATTGAATACAACATGGCTGATCGACTCGCAAACAAACCACA ATTCTAGAAAGAAACGCGTTGTAGAACTTATGTGCATTTTTACACAAGTC GTGTCACACGAGTAAGGACTGAGCCATTTATTGAGATAAGGGGAGTAATC CTGGTGTGAATTACTGTTTATGCCATACGTTTTTAAATTGCCGAAGTAAA ACCTTTAGGTCTTACCCGGGAAACGGGCTTTGCAGTGAGGATAACGACTT GAAGTTTAAGTTATAGTTAAAGGATCTTAAAGTGTTTTTGAGGTCATTGC TTTTTATGGTTCCACCCTATGAATTCCGAAAGGTTCCACAAGCCAGCGAA CAAACAAGCTTGACAAGTCGTCAAAGGCGCCTGCGCGCGGCTGGACTTCA AAGGCAACAAGCCAATCGCACTCCGAGAATTGCTGGGACTTCCCCAAACT GAGCCTGAGTATACTAGTAAACTCGCGCGGCGCCTATATATACACTTTAA CGCCTGCACGGCATTTGGTACTGCCACTTGTTTGTCGCTTTACGTTGGAC ATATATCTCGTTCGTACAGGTAAATAGGAACCGCAAACCACGTTTATTTT CATTCTGACATTTTCCACTATGTCCCATACTATATCCAGTTAGATTAACG AATTTTCTGTCTGCCTTTTACAGAACTACACTTTACTGCTGGTGGTTTAT TAATCGGCAAGGAACATGGCAGGACTACAGTCAGTGGCGATTACAGCTGA GAAGAACGGTAAGTGTGATCAAATCTCCTCCTAAATTGCGGGAATCATAT TTTCCGGTTATGATGTAAAAAAAAATGGCTGAAAGTGGTTTTCAACAAGG TACTAGTAGTACATTTTTCTAGACAGCTAAATGCGGCTCTTCTTACGTTT AAGGGACAGAGTTGTTTACTTTGGAAATGACCATGAATGAGCGTTCAGGA CAATTCCATTCGTGCCGCACGAATCTTAAATGTTTTGCTGGGATTATGTT CAGATTGAACTCCCATTTACAAATCCTAAGTTTAAAGTAAATTCATCCAT CCGTCCTTACGATTTGCCGTTAGCCAAAGTTTGCAAAGTTTATTTCCGAC TTTTTTTGTTGAATGAGTGAGTCCAGATAGTTAGCGAATGACCAGTCCAG TCGGCAAAATATTGGCTGAATACACTACCGCAAATGTTCAGGAAGATGTC CCATGTTTACCTGCTAAGTTTTCGTGCTATACACGTTTTTTTCCAGTACT TTTAGAAGGTTAAACGTCGGTGTGTTTGTGTTCATCACGGTTTCAACCCG GCCATCTTGAATATCTAATAGATCATGTACTTGCCATTGTCCAACCATGT TTGCGTAGTGGTGGTACATGTGGTTGAGAAAAAAAGCTTATAGACAGTTA AACAATTAACATGCATCAAGCACACATGGTCAGGAAATGGCAAATAAATG ATCTAGTATTCAAGATGTCGGTGTGGAACCCGTGATTAGTAGTCACTGTA ATGCTCTTTCACCCTAAATGATTAAGTGCGACAGGCAATGTACATGTACT TCAGCCAGTTTAACTTGGAGCTCTGTGATAGTCTACTATCTGATTAACTC TATGTTCTTCACAGAGTTGCAGAATGCAACCCCGAAATCGCCTCTGACTG TGCCTTGTGAGAAGTGCGGCCACAACACGCCTGTTCCCGTGATCAACACG ACTGTCAACATCACCAACAACAAGCACTACAACTTCACAGAGTGTCAGAA TGTGCAGTGTGGAGACAACAACTCCATAAGCGTCGGAACTGCAGAGGACT CCTCCGACTATGCAAGCACTGAAGGAAATCTGCAATGTTCTCTGGGCGGT AACTAGTTGATATTTTTTGGGGAGACATTTACTGAGAAACAAATCACCCG ACAGTGCAATAATCAGAAGATACAATGTGGCAAAAAGGCATTGTATTCCA AGTAAAACTACTGAAACATACCACAAAATGCAAACAACTGAACTTGTAAT TAAATGTTTATTGCTTTTGTAGTTATTCTTATGTATAGCTATTGGCTGAT TAAAAATCAACAAATATATAACTAAGACTGCCACCTTCGTCCCCAGAAAT AAATAAAAAATGACCCCAGCAGCTTTAGGTCAACGGCCTAAGTTGTAACG TTGTTAACCATTAACGCATAGCTAAATCGATTGCTTACTTGTTCAATTTT ACTCTTGTTTGTTCATTCGGTCAGTAATGATAATACCCTACCTGGCACAG CAGTTGATTTCTTTTACTGGTCAAGAGAAAGCTGTTCATGAAACTGGACC GAACTAGTACTTAATCAGATCCTTAAGAAGTTTTTTGCACACATATTTTC ACGTAGATACGCCATGTTCACAGTATTTGATGGTTTAGAAAGCAGTCGGT AGGATTCTTCTTCCCCCATAACATAAGGTACCAGTACCTTGTCGACAATG TTTTTGGTGAACTTTCAAACTGACCGTCCCGTTCTGATTTCCCCATCGTA CCACTGCACGCATCGTCATCATTGTGGAAAGTAGAATCCTCTGGCGAACC GGCAAGATGCGAATCTAGCGTCATGGTGGAAGAAAAACTCTAAGTGGCCA AATTACAAACTCTGAACACCTTACGCTTACTGTGCTGGTCATGTGACTAT GATCGGGCTATACCATTTGGGAGGAGAGGGCT

Coding sequence (CDS) from alignment at Sc0000026:1335605..1340286+

>Blg00206.1 ID=Blg00206.1|Name=Blg00206.1|organism=Branchiostoma lanceolatum|type=CDS|length=285bp|location=Sequence derived from alignment at Sc0000026:1335605..1340286+ (Branchiostoma lanceolatum)
ATGGCAGGACTACAGTCAGTGGCGATTACAGCTGAGAAGAACGAGTTGCA
GAATGCAACCCCGAAATCGCCTCTGACTGTGCCTTGTGAGAAGTGCGGCC
ACAACACGCCTGTTCCCGTGATCAACACGACTGTCAACATCACCAACAAC
AAGCACTACAACTTCACAGAGTGTCAGAATGTGCAGTGTGGAGACAACAA
CTCCATAAGCGTCGGAACTGCAGAGGACTCCTCCGACTATGCAAGCACTG
AAGGAAATCTGCAATGTTCTCTGGGCGGTAACTAG
Gene-mRNA-Prot
The following exon feature(s) are a part of this mRNA:
Feature NameUnique NameSpeciesType
Blg00206.1-exon-Sc0000026-1570713199:1335605..1335638Blg00206.1-exon-Sc0000026-1570713199:1335605..1335638Branchiostoma lanceolatumexon
Blg00206.1-exon-Sc0000026-1570713199:1338278..1338362Blg00206.1-exon-Sc0000026-1570713199:1338278..1338362Branchiostoma lanceolatumexon
Blg00206.1-exon-Sc0000026-1570713199:1339219..1340286Blg00206.1-exon-Sc0000026-1570713199:1339219..1340286Branchiostoma lanceolatumexon
The following polypeptide feature(s) derives from this mRNA:
Feature NameUnique NameSpeciesType
Blg00206.1Blg00206.1-proteinBranchiostoma lanceolatumpolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Sc0000026genomeSc0000026:1335605..1340286 +
Properties
Property NameValue
GeneIDBlg00206