Blg00205.2 (mRNA) - B. lanceolatum

Overview
NameBlg00205.2
Unique NameBlg00205.2
TypemRNA
OrganismBranchiostoma lanceolatum (Amphioxus)



Sequence
The following sequences are available for this feature:

mRNA from alignment at Sc0000026:701765..706764+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>Blg00205.2 ID=Blg00205.2|Name=Blg00205.2|organism=Branchiostoma lanceolatum|type=mRNA|length=5000bp|location=Sequence derived from alignment at Sc0000026:701765..706764+ (Branchiostoma lanceolatum)
TGTCAATGAACTCTATGCAGCCTCGTTTTGATGCGGGAAGTTGATCGACC AGCCCTCAGATAACGCAAGGTGAAAGACGAATCCATACAGATTCTACAAT TAAGGAATACGAGGCCAAACTGAGGTAAGCAATTCCTATCCCAGTCAGAC CTCTGATCACCATACTGTCACTACAAACTGCTTAGAATAGACTGATTCTT TTACATGTTCTAAAATTCTGCATTAAGTGCAGGGAAGGTAAGGCGGAAGT AAAATGCAAATGGCGAGGTTGTAGTTCTTCATTGTTACCTTCGCGACGAA TGGTTTCGTCGAGAAGGTTATGCGACGGTGCTTGTCTGTGTGTCTGTTAG TGAACAGAATAAGTCGAGAACGCCTGGATGGTTTGTTGTCGTAGTTGGTG TGTCGGTGTGTATGTGGCAAATCTCAAGATGATTAGATTTTGGGCGAAGT GTTTTGCATAATTAACGAGAAAAGTGTAAAAATGTGTTAGATTGTATGCT CATACTATGCTTTCTGGTTGCGACGTGTGGGCTGTATTGTTTCAGGGGAT ATTGACACGGGTAAATGGGTGCAAAGTTGGTCATGAGGGGTCATGAGGCA GGCAGGAAACGTCAGCTGCTGCCAGGGACAAATTGGCTATCAGCCAGCTG TAGGGCAGATACAAGAGATAGACTTGCCCATATAGGCAGTAATGCTTTAA AGCACTAAAACAAGGGCTCAGAAAAGGATTCACCTTAATTGCAAGCCCCC AAAATTCTTATGCACCAGAAAGCCACATCTGTCTACTTTAGAATCATGCA AAGAAAATAGACAGTTGACCAGCTCGTTCTCTCGTAACAGCTGACAGACG AAAACAATCGTCAACTTTGACCTACTCCCAGCCTGGAAGAGTCCACTCGG AGCATGTGAAACCAAACCACAAAGATATCTCCTTACACCAATTAAAAGAC TGAAACATACAAATTTTGACCAAAGTTGGATATACACGGCCTTATATGAG TAAGAACAGTCATTAATGCAGTGCCACAGCATGGGAATACCGAGCATGTC TGTGTGTCTGTTAGTGAACACGATAAGTCGAGAATTCTTGGAAGGATTGT CTTGGTATTTGGTATGTTGGTAGGTCTCGATGAAACCTGAAAATGATTAG ATTTTGGGCCCCCTATCGGCTTGTTACGGTACTGCAGCGGAACTTCATGT TATGATATCTCGTGTTGTGGACATGCTATGGAACTGATTTTTGAGTGGTA GATAGCTCGTTGGGCAGAGAGTAAGTGGTATAGGTTTGGGCCCCCTAGCA ACTTTTTTGGAACTGCAGGGGTAGGTTTTGCTTCAGACTTTGAAAGGGAA TAACTCAAGAAGGGCTTGATGGAAGGTCATGATTTTTTGCATGTACATAG CTTGAGCGATGATGTACATGATTGGATACTTATTATGCAAATCAGTAACT AATTTGCATAATTAATGAGGAAAGTTTATACATTCATCAATTTCCATGAT AGGACTCGCAAACATGTGACATATGTAACTGAGGAAGAGAGAAATATTAA TAGATATCAGCTATGCAAATGAGAACCTCATTTACATAATTAATGAGAAA ATAATATAACTCGAGATGGGCTTGATGGATGGTCATGATTTTTGGTATGT AGATAGCTTATGTGATGCTTTGTATGATTGGATGATAATTATGCAAATCA GATTATAATTAATGAGGCAATTTTAAAAACCTGCTGTGTTCCATGATATG ACTATTCAAATATGTGACATTTGTAACTGAGGAAGAGAGGAATGTCAATA GATAGAAATTATGCAAATGTAGGCCTAATTTGCATAATTCATGAGAAACT ACTATCATTCCATACTAGTAAATAACGGCAATTTCATACTTGTTGCATTT AGAAGTTGTGTGAATGTGAACACCATTGAATCAAATTATGCTAATAAGGA GCTTATTTGCATTATTGATGAAAAATGTTAGCATAACCTTCTTTGTTAAG CTCATAATCATAACAAGGAGGTTTGGACAACTTATGTTATTTGGGTGAGG AGGATCAACTGGTATGATTTTTGATTGATGAAAAACACTCCTAATACGTC AGTCATAAAGGTCAAAATCATTTCGCGAAGGTATGAGGTCGTAGAACTCT TGTTGCAAATGTCTTAAGGTAGGTTAGAATAAGTTAAGGAAAGGGCTCCC TTCCGAGAGAAATTTATCAGTACAGTCGTTGACGCCGCGGTTGCGCAGTG GCAGGGTGTTTGGCCCAGAGCCCAGAGGTTCGAATCCGGAATCCCCTGAT TTGTCTCGTTAACGTTGTGCCCATGGGAAAGGCACTTAACAAGAATTTCC TCACTTCACTCAGGTGAAAATGAGCACCTGACTTTATCTAGGGACGTCCC TCGGATAGGACGTTAAATGGAGTTCCCGTGTTTGAGGAGAGCCACACCTC GAGCACGTAACACATATCGAAAAGAGTAGGGCTCCTTCCCGGTGTGAGTG GATCAGATAAATCTGTCCGGATATGCAACTTCAATACAAACATGGTGTGT TACGCCATGAGACAGTTTACCGGGTATGCAGTACAAACAAGCAAACTGAA TAAAATGACTCTTTTTACACAACCAAGAGATTTATTCCACCGACGTTTCG GTGACCATCTGTCACCTTCTTCAAGGTAATTCTGACTGGTTCACATAGCA ATGCAGCACAGGTGTTGCTGCTTATACATAATGAGATGCATTCCCAAACG CAAAATATTTACATATGTACAAATCACAGGACATGACATCACGGTCCCAA ACATACAGAACATATGCACAACTATCGATCAAAAAACAACAAACAAACAA GCAAACTGTTGTTGATTAGAAGAGAACAGCTGTGAAACAGAGGAATGAAT GTTGTTGATGCTTATCTGGTGGGACTGTCCTGTATTCTTCAACATAGGAT GTCACATCTTCCAGTCACATCAAAATGAAGCTATCAGCCAACTGTGGCAT GTAGCCAGGGCTTCAACCATGCAGCCAAAGAGTATCATTATGGGATATTA TATTGTATCATATCATATATCATTAGGCGAGATATCTAATGTGCTCTTGA TGTGGCTCCCCTCAAACGTGTCACTTCCCTTTTACCCCCCCCCCCCTGAA GGACTTGCATTATACCGGTAACGTTAATTACGGGTTTCTAACAATCTGTT AAGTGTTATGCTGATGATGACTGTTGCTTTCTCTCTTAGATTGTCCTTCC TCTCTCTCTCTGCCCAGGAAGAACCAAGAAAGGCGGCAGCATCCGGCTAC AATTCCCGTGACATGGAACAGTGGTACTTTGGGGGCGTCAGTCGCCGGCA AAGTGAGGAATTACTCAAAGGAACGCCGGTCGGGACGTTCCTGCTGCGTG ACGCTACCAACCATCCTGGGAACTATTCGCTCTCTGTCAGTTCAGACACA AGAGTCCGCCACTACTTCATCAAAAGACTGCAGAATGGCTTCCAGATCGC TGACCAGGATTTCGAGGACCTGCCTTCTTTGATCGAGTTCTACAAGATAC ACTACCTTGACACGACCACGTTGACTGTTCCGGCGCAGCGCCCAGCCGAA TGACTGCCAGAACTCTAGCCCTCGACTTCCGTACCTGCTCCCACTGTTAT ATGTGTTCGAGCGCTCTACGATTCTAACGCAAACGATCCAGAGGACTTGC CTTTCCAGAAAAACGAAATAATGGTGGTGGTTAGAAAGGATGGTTACCAG TGGTGGACTGTACGCAACAGGACATTTTTCCTTCAAACATGTTAAAGTTA TCGACCCTAGTAATTTTGAGGAAATTTATGTTGGAGCTAAACGGTACTGG AAATAGATTAAAACATACACAGAAAAAGCTGATACACGAATCTTCGAGGC TAACACATGTGTTAGAATGTTCCATATAAAAAAATGAAAGATGAAAACTT GGACTAACAAATTTAAAGTACCAAACGAAGAAAGGTGAAGGGTAGCATTT TATCTTTTGTGTACATCTACTATTTGGNTGCTATTTGGTGTTGTTAATAG CTTACTTGATTTGATTTGATTTATTCATCTTGAACATACTTAAATCATAC ACATGCCAATATACAAGAACAATAAAAGCAAACGTGCATGGGCGAAAAAG TAAAGCCACAGTGGCTTACTAGAGATCTCCCCACTTAATACTAGTTGCAC ATTAAAATTTTGAAATCAAATAGCAATCATAAGAAATCAGCTCATGGAAC AATTTCAAAACGATGTTGATTTATAAGATTTGCAATTACACAATTACAAT AGATATAAAGCTACGTAATATACGTAGTAAACAACTAATCAAATTGACTA CAAACATAACTACTTACAAAGATAGGTGAACGAATAAGAAAAAGGGATGA AGATAGTCTTAAAATAGAACACAGAAAGTAAATGAAATATAAAGAATATT TGTAAATGTCGTCCTTTAGGATGGGGCCCTAAAAATACAATTAGTATCAG TCCTGCGAAGCGGAGCGAAAAAACGTAACTAGTAGACCATATCCGAGGGG CATCATTGTCTTCGATAGTAGTAGAAAGGTTTATTGCTAAAACAACATAG CAGTTAGTACATAGCAGCCAACTGGCTGAATTGCATACTTGCTGTACAGG TCGTATTCAATAACTAACTATTTACAGCTTATACAAATAATACTTTCAAT TGGTAGAGACATTACGATTCTAAAAGGCAATTAAGCAGTTAGAACAACTG GTCAGATCAGTAACGGTCTGCATTAATGTGTAAAGGCGAGACTTATTCGC AACAATGAACATATGCGTAATATATAAAAGATATCTTTGCATGTTGTTGA AAATGACAAATCATATATCTGTACTGTATAAGGTATACCTGCTTACAACT ATTATATGAGAATATGTATTAATTGAACAATGTGATACATGAGACATATA TACCCAGAAAATAGTTGGACAGAGTGTTGTTTTTTTTAATTTTAACAAAG

Coding sequence (CDS) from alignment at Sc0000026:701765..706764+

>Blg00205.2 ID=Blg00205.2|Name=Blg00205.2|organism=Branchiostoma lanceolatum|type=CDS|length=291bp|location=Sequence derived from alignment at Sc0000026:701765..706764+ (Branchiostoma lanceolatum)
ATGGAACAGTGGTACTTTGGGGGCGTCAGTCGCCGGCAAAGTGAGGAATT
ACTCAAAGGAACGCCGGTCGGGACGTTCCTGCTGCGTGACGCTACCAACC
ATCCTGGGAACTATTCGCTCTCTGTCAGTTCAGACACAAGAGTCCGCCAC
TACTTCATCAAAAGACTGCAGAATGGCTTCCAGATCGCTGACCAGGATTT
CGAGGACCTGCCTTCTTTGATCGAGTTCTACAAGATACACTACCTTGACA
CGACCACGTTGACTGTTCCGGCGCAGCGCCCAGCCGAATGA
Gene-mRNA-Prot
The following exon feature(s) are a part of this mRNA:
Feature NameUnique NameSpeciesType
Blg00205.2-exon-Sc0000026-1570713199:701765..701888Blg00205.2-exon-Sc0000026-1570713199:701765..701888Branchiostoma lanceolatumexon
Blg00205.2-exon-Sc0000026-1570713199:705004..706764Blg00205.2-exon-Sc0000026-1570713199:705004..706764Branchiostoma lanceolatumexon
The following polypeptide feature(s) derives from this mRNA:
Feature NameUnique NameSpeciesType
Blg00205.2Blg00205.2-proteinBranchiostoma lanceolatumpolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Sc0000026genomeSc0000026:701765..706764 +
Properties
Property NameValue
GeneIDBlg00205