Blg00205.1 (mRNA) - B. lanceolatum

Overview
NameBlg00205.1
Unique NameBlg00205.1
TypemRNA
OrganismBranchiostoma lanceolatum (Amphioxus)



Sequence
The following sequences are available for this feature:

mRNA from alignment at Sc0000026:701828..706764+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>Blg00205.1 ID=Blg00205.1|Name=Blg00205.1|organism=Branchiostoma lanceolatum|type=mRNA|length=4937bp|location=Sequence derived from alignment at Sc0000026:701828..706764+ (Branchiostoma lanceolatum)
CGCAAGGTGAAAGACGAATCCATACAGATTCTACAATTAAGGAATACGAG GCCAAACTGAGGTAAGCAATTCCTATCCCAGTCAGACCTCTGATCACCAT ACTGTCACTACAAACTGCTTAGAATAGACTGATTCTTTTACATGTTCTAA AATTCTGCATTAAGTGCAGGGAAGGTAAGGCGGAAGTAAAATGCAAATGG CGAGGTTGTAGTTCTTCATTGTTACCTTCGCGACGAATGGTTTCGTCGAG AAGGTTATGCGACGGTGCTTGTCTGTGTGTCTGTTAGTGAACAGAATAAG TCGAGAACGCCTGGATGGTTTGTTGTCGTAGTTGGTGTGTCGGTGTGTAT GTGGCAAATCTCAAGATGATTAGATTTTGGGCGAAGTGTTTTGCATAATT AACGAGAAAAGTGTAAAAATGTGTTAGATTGTATGCTCATACTATGCTTT CTGGTTGCGACGTGTGGGCTGTATTGTTTCAGGGGATATTGACACGGGTA AATGGGTGCAAAGTTGGTCATGAGGGGTCATGAGGCAGGCAGGAAACGTC AGCTGCTGCCAGGGACAAATTGGCTATCAGCCAGCTGTAGGGCAGATACA AGAGATAGACTTGCCCATATAGGCAGTAATGCTTTAAAGCACTAAAACAA GGGCTCAGAAAAGGATTCACCTTAATTGCAAGCCCCCAAAATTCTTATGC ACCAGAAAGCCACATCTGTCTACTTTAGAATCATGCAAAGAAAATAGACA GTTGACCAGCTCGTTCTCTCGTAACAGCTGACAGACGAAAACAATCGTCA ACTTTGACCTACTCCCAGCCTGGAAGAGTCCACTCGGAGCATGTGAAACC AAACCACAAAGATATCTCCTTACACCAATTAAAAGACTGAAACATACAAA TTTTGACCAAAGTTGGATATACACGGCCTTATATGAGTAAGAACAGTCAT TAATGCAGTGCCACAGCATGGGAATACCGAGCATGTCTGTGTGTCTGTTA GTGAACACGATAAGTCGAGAATTCTTGGAAGGATTGTCTTGGTATTTGGT ATGTTGGTAGGTCTCGATGAAACCTGAAAATGATTAGATTTTGGGCCCCC TATCGGCTTGTTACGGTACTGCAGCGGAACTTCATGTTATGATATCTCGT GTTGTGGACATGCTATGGAACTGATTTTTGAGTGGTAGATAGCTCGTTGG GCAGAGAGTAAGTGGTATAGGTTTGGGCCCCCTAGCAACTTTTTTGGAAC TGCAGGGGTAGGTTTTGCTTCAGACTTTGAAAGGGAATAACTCAAGAAGG GCTTGATGGAAGGTCATGATTTTTTGCATGTACATAGCTTGAGCGATGAT GTACATGATTGGATACTTATTATGCAAATCAGTAACTAATTTGCATAATT AATGAGGAAAGTTTATACATTCATCAATTTCCATGATAGGACTCGCAAAC ATGTGACATATGTAACTGAGGAAGAGAGAAATATTAATAGATATCAGCTA TGCAAATGAGAACCTCATTTACATAATTAATGAGAAAATAATATAACTCG AGATGGGCTTGATGGATGGTCATGATTTTTGGTATGTAGATAGCTTATGT GATGCTTTGTATGATTGGATGATAATTATGCAAATCAGATTATAATTAAT GAGGCAATTTTAAAAACCTGCTGTGTTCCATGATATGACTATTCAAATAT GTGACATTTGTAACTGAGGAAGAGAGGAATGTCAATAGATAGAAATTATG CAAATGTAGGCCTAATTTGCATAATTCATGAGAAACTACTATCATTCCAT ACTAGTAAATAACGGCAATTTCATACTTGTTGCATTTAGAAGTTGTGTGA ATGTGAACACCATTGAATCAAATTATGCTAATAAGGAGCTTATTTGCATT ATTGATGAAAAATGTTAGCATAACCTTCTTTGTTAAGCTCATAATCATAA CAAGGAGGTTTGGACAACTTATGTTATTTGGGTGAGGAGGATCAACTGGT ATGATTTTTGATTGATGAAAAACACTCCTAATACGTCAGTCATAAAGGTC AAAATCATTTCGCGAAGGTATGAGGTCGTAGAACTCTTGTTGCAAATGTC TTAAGGTAGGTTAGAATAAGTTAAGGAAAGGGCTCCCTTCCGAGAGAAAT TTATCAGTACAGTCGTTGACGCCGCGGTTGCGCAGTGGCAGGGTGTTTGG CCCAGAGCCCAGAGGTTCGAATCCGGAATCCCCTGATTTGTCTCGTTAAC GTTGTGCCCATGGGAAAGGCACTTAACAAGAATTTCCTCACTTCACTCAG GTGAAAATGAGCACCTGACTTTATCTAGGGACGTCCCTCGGATAGGACGT TAAATGGAGTTCCCGTGTTTGAGGAGAGCCACACCTCGAGCACGTAACAC ATATCGAAAAGAGTAGGGCTCCTTCCCGGTGTGAGTGGATCAGATAAATC TGTCCGGATATGCAACTTCAATACAAACATGGTGTGTTACGCCATGAGAC AGTTTACCGGGTATGCAGTACAAACAAGCAAACTGAATAAAATGACTCTT TTTACACAACCAAGAGATTTATTCCACCGACGTTTCGGTGACCATCTGTC ACCTTCTTCAAGGTAATTCTGACTGGTTCACATAGCAATGCAGCACAGGT GTTGCTGCTTATACATAATGAGATGCATTCCCAAACGCAAAATATTTACA TATGTACAAATCACAGGACATGACATCACGGTCCCAAACATACAGAACAT ATGCACAACTATCGATCAAAAAACAACAAACAAACAAGCAAACTGTTGTT GATTAGAAGAGAACAGCTGTGAAACAGAGGAATGAATGTTGTTGATGCTT ATCTGGTGGGACTGTCCTGTATTCTTCAACATAGGATGTCACATCTTCCA GTCACATCAAAATGAAGCTATCAGCCAACTGTGGCATGTAGCCAGGGCTT CAACCATGCAGCCAAAGAGTATCATTATGGGATATTATATTGTATCATAT CATATATCATTAGGCGAGATATCTAATGTGCTCTTGATGTGGCTCCCCTC AAACGTGTCACTTCCCTTTTACCCCCCCCCCCCTGAAGGACTTGCATTAT ACCGGTAACGTTAATTACGGGTTTCTAACAATCTGTTAAGTGTTATGCTG ATGATGACTGTTGCTTTCTCTCTTAGATTGTCCTTCCTCTCTCTCTCTGC CCAGGAAGAACCAAGAAAGGCGGCAGCATCCGGCTACAATTCCCGTGACA TGGAACAGTGGTACTTTGGGGGCGTCAGTCGCCGGCAAAGTGAGGAATTA CTCAAAGGAACGCCGGTCGGGACGTTCCTGCTGCGTGACGCTACCAACCA TCCTGGGAACTATTCGCTCTCTGTCAGTTCAGACACAAGAGTCCGCCACT ACTTCATCAAAAGACTGCAGAATGGCTTCCAGATCGCTGACCAGGATTTC GAGGACCTGCCTTCTTTGATCGAGTTCTACAAGATACACTACCTTGACAC GACCACGTTGACTGTTCCGGCGCAGCGCCCAGCCGAATGACTGCCAGAAC TCTAGCCCTCGACTTCCGTACCTGCTCCCACTGTTATATGTGTTCGAGCG CTCTACGATTCTAACGCAAACGATCCAGAGGACTTGCCTTTCCAGAAAAA CGAAATAATGGTGGTGGTTAGAAAGGATGGTTACCAGTGGTGGACTGTAC GCAACAGGACATTTTTCCTTCAAACATGTTAAAGTTATCGACCCTAGTAA TTTTGAGGAAATTTATGTTGGAGCTAAACGGTACTGGAAATAGATTAAAA CATACACAGAAAAAGCTGATACACGAATCTTCGAGGCTAACACATGTGTT AGAATGTTCCATATAAAAAAATGAAAGATGAAAACTTGGACTAACAAATT TAAAGTACCAAACGAAGAAAGGTGAAGGGTAGCATTTTATCTTTTGTGTA CATCTACTATTTGGNTGCTATTTGGTGTTGTTAATAGCTTACTTGATTTG ATTTGATTTATTCATCTTGAACATACTTAAATCATACACATGCCAATATA CAAGAACAATAAAAGCAAACGTGCATGGGCGAAAAAGTAAAGCCACAGTG GCTTACTAGAGATCTCCCCACTTAATACTAGTTGCACATTAAAATTTTGA AATCAAATAGCAATCATAAGAAATCAGCTCATGGAACAATTTCAAAACGA TGTTGATTTATAAGATTTGCAATTACACAATTACAATAGATATAAAGCTA CGTAATATACGTAGTAAACAACTAATCAAATTGACTACAAACATAACTAC TTACAAAGATAGGTGAACGAATAAGAAAAAGGGATGAAGATAGTCTTAAA ATAGAACACAGAAAGTAAATGAAATATAAAGAATATTTGTAAATGTCGTC CTTTAGGATGGGGCCCTAAAAATACAATTAGTATCAGTCCTGCGAAGCGG AGCGAAAAAACGTAACTAGTAGACCATATCCGAGGGGCATCATTGTCTTC GATAGTAGTAGAAAGGTTTATTGCTAAAACAACATAGCAGTTAGTACATA GCAGCCAACTGGCTGAATTGCATACTTGCTGTACAGGTCGTATTCAATAA CTAACTATTTACAGCTTATACAAATAATACTTTCAATTGGTAGAGACATT ACGATTCTAAAAGGCAATTAAGCAGTTAGAACAACTGGTCAGATCAGTAA CGGTCTGCATTAATGTGTAAAGGCGAGACTTATTCGCAACAATGAACATA TGCGTAATATATAAAAGATATCTTTGCATGTTGTTGAAAATGACAAATCA TATATCTGTACTGTATAAGGTATACCTGCTTACAACTATTATATGAGAAT ATGTATTAATTGAACAATGTGATACATGAGACATATATACCCAGAAAATA GTTGGACAGAGTGTTGTTTTTTTTAATTTTAACAAAG

Coding sequence (CDS) from alignment at Sc0000026:701828..706764+

>Blg00205.1 ID=Blg00205.1|Name=Blg00205.1|organism=Branchiostoma lanceolatum|type=CDS|length=291bp|location=Sequence derived from alignment at Sc0000026:701828..706764+ (Branchiostoma lanceolatum)
ATGGAACAGTGGTACTTTGGGGGCGTCAGTCGCCGGCAAAGTGAGGAATT
ACTCAAAGGAACGCCGGTCGGGACGTTCCTGCTGCGTGACGCTACCAACC
ATCCTGGGAACTATTCGCTCTCTGTCAGTTCAGACACAAGAGTCCGCCAC
TACTTCATCAAAAGACTGCAGAATGGCTTCCAGATCGCTGACCAGGATTT
CGAGGACCTGCCTTCTTTGATCGAGTTCTACAAGATACACTACCTTGACA
CGACCACGTTGACTGTTCCGGCGCAGCGCCCAGCCGAATGA
Gene-mRNA-Prot
The following exon feature(s) are a part of this mRNA:
Feature NameUnique NameSpeciesType
Blg00205.1-exon-Sc0000026-1570713199:701828..701888Blg00205.1-exon-Sc0000026-1570713199:701828..701888Branchiostoma lanceolatumexon
Blg00205.1-exon-Sc0000026-1570713199:705036..706764Blg00205.1-exon-Sc0000026-1570713199:705036..706764Branchiostoma lanceolatumexon
The following polypeptide feature(s) derives from this mRNA:
Feature NameUnique NameSpeciesType
Blg00205.1Blg00205.1-proteinBranchiostoma lanceolatumpolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Sc0000026genomeSc0000026:701828..706764 +
Properties
Property NameValue
GeneIDBlg00205