Blg00204.5 (mRNA) - B. lanceolatum

Overview
NameBlg00204.5
Unique NameBlg00204.5
TypemRNA
OrganismBranchiostoma lanceolatum (Amphioxus)



Sequence
The following sequences are available for this feature:

mRNA from alignment at Sc0000026:93294..95397+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>Blg00204.5 ID=Blg00204.5|Name=Blg00204.5|organism=Branchiostoma lanceolatum|type=mRNA|length=2104bp|location=Sequence derived from alignment at Sc0000026:93294..95397+ (Branchiostoma lanceolatum)
ATGATTATGTTTCCTGTCTTCCACAGGAAGTTGGGCTGTGCTGATGTTCT CACCAACATCAAACAAGAACCTTACGACCCCACCTTAGACGGTTCAGAAG TCAGTGGTGAGGTCACATCCATCAGTGGAGAATCATCTCATACCAGCACA AGTAGGAGAGGCATATCTATCAAACAAGAGCCATGTGAACACATCCCACA GGGTTCACAGGTCACCACTGTCAAACAGGAGGCATGTGACCCCATCCCAC AGGGTTCACAGGTCACCACTATCAAACAGGAGGCATATGACCCCATTTTG CAGGGTTCAAAGGTCATCAAACAAGATGCATGTGACCCCATCCCACAGAG TTCACAGGTCACCACTATCAAACGGGAGTCATGTGACCCCATTCTGCACG GTTCACAGGTCATCAAACAAGTGGTATGTGACCCCATCCCACAGAGTTCA CAGGTCACCACTTTCAAACAAGAGACACATGACCACACCCCACAGGGTTC ACAGGTCACACAGGGTTCACAGGTCACTCCTATCATACAAGAGACATGTG ACCCCGCCCCACAGAGTTCACAGGTCACACCTGTAGGACAAGGGCCACTA CGACTGCAGGGGGATACTAACACTTCTCAAGAAGCTACTGTGGCAGGTGC AAACATACCTGACATGTCGGGCTCAGACAACAGTCCCGAGTTTGTTTGGC ATGCAGAGAAAAACACAGTGATCATGACAAGCAGGAATAGCTCAAGCTCT ACCTCTACCACATTTCGCACAACGCAGGGATGCACAGTCAAAGAAGTTTC TCTAGGCAGTTTACAAGTGATGGAAATACTTCCACTCGAGGAAAATCCTT CGTCCTCTGAGAGCAAGAGAGAAGAAGGTGAAGCAAGTCAAGTGAGGAAT GACGATAGCGATGGGGTGGAGATGTCATTGGCTCAGATGTCAGAAGACTT CTGTAGATGTGACATATGCAAGGCTTGGTTCCTCACCCAGCATAGTTTGA AGTACCACAGGCGAGTTCACTTGCGTGAGATGAAGAAACTGAAGGTGGAA AGTTTGGAGCAACTGTCGGAAGCACAGAAGGAAGCTCTGTCAGCCTACGG CAGGATGTACCCCTTCCATTGTAACCTGTGTGGGGAATATTTCCAGTCGG TGCACGGCCTTAGGACCCATCGGGGGCTCAAGCACAATAATCAGAATCAC ACCACAGCAAAGACCAAGAAATTCTCGACAGTCACCAGCAGTGGTCCTCT GGAGGAAGAAGATGATGATGATAATACAATTAGAAGTAGTGATTGGATGG AGAAAGCGCTGGCTCATATGTGGAATCCGCACGATACGGGTGACTATCGC TGTCACTTCTGTAGCTTAAATTTTAAAACAAGGAGGGATTTATCTGGTCA TCTCAGAACGATACACAAGTTCCGCCACTGTGCCACCTGTAGAGTACAGA TCATGTCCGAGGAAGAGGCGAGAAGCCACGAACTGATGCACCTTTACAAA CAGCAGGGGCCAGGTGAGCCAAACACAGAGCAAGCCACAAGGACCAAAAC TAGGGACAAGCCTCTTGTAGTGGGACCTAGCCAATCAGTTGGTGTCAAAC GCTCAGAGGTTGAGAGTGTGGTTGCCTCCAAGTCCAAGTCTGATCGGCGC TTGCACGCCTGCGACGTCTGTAAGGCCACGTTCCTAACACAGCACCACTT GAACTGCCACGTCGGAATCCACATGCGCGAGATGAAAAAACTGAAGGCGG AAAGCGTGGACCAGCTGGCAGATACGCGGAAGGAAGCTCTGTCGGGCTTC GCCAAGATGTACCCGTTCCGGTGCGAGGTGTGCGGGGAGCGTTTTCAGAC GAAACACGGCACGGAGACCCACAAGGTGGTGAAGCACTACCAGCATTATA CAACGGCAAACACCAAAAAGGTTCCAACGGTCGGCATTGTCCCCGACGGC CATCTGGTAGCGTACAACAAAAGGCGCGGGTTCATTTACAAGTCCTGGCA GGAGTAAAGAGCCCTGACAGCCTACATGTCCTGTATTATTCATGTAGTGC ACTGTGTGTTCATGGCAAGAATGTAAAGACTGTAACGTTAGTATTGTAAA GACA

Coding sequence (CDS) from alignment at Sc0000026:93294..95397+

>Blg00204.5 ID=Blg00204.5|Name=Blg00204.5|organism=Branchiostoma lanceolatum|type=CDS|length=1911bp|location=Sequence derived from alignment at Sc0000026:93294..95397+ (Branchiostoma lanceolatum)
ATGATTATGTTTCCTGTCTTCCACAGGAAGTTGGGCTGTGCTGATGTTCT
CACCAACATCAAACAAGAACCTTACGACCCCACCTTAGACGGTTCAGAAG
TCAGTGGTGAGGTCACATCCATCAGTGGAGAATCATCTCATACCAGCACA
AGTAGGAGAGGCATATCTATCAAACAAGAGCCATGTGAACACATCCCACA
GGGTTCACAGGTCACCACTGTCAAACAGGAGGCATGTGACCCCATCCCAC
AGGGTTCACAGGTCACCACTATCAAACAGGAGTCATGTGACCCCATTCTG
CACGGTTCACAGGTCATCAAACAAGTGGTATGTGACCCCATCCCACAGAG
TTCACAGGTCACCACTTTCAAACAAGAGACACATGACCACACCCCACAGG
GTTCACAGGTCACACAGGGTTCACAGGTCACTCCTATCATACAAGAGACA
TGTGACCCCGCCCCACAGAGTTCACAGGTCACACCTGTAGGACAAGGGCC
ACTACGACTGCAGGGGGATACTAACACTTCTCAAGAAGCTACTGTGGCAG
GTGCAAACATACCTGACATGTCGGGCTCAGACAACAGTCCCGAGTTTGTT
TGGCATGCAGAGAAAAACACAGTGATCATGACAAGCAGGAATAGCTCAAG
CTCTACCTCTACCACATTTCGCACAACGCAGGGATGCACAGTCAAAGAAG
TTTCTCTAGGCAGTTTACAAGTGATGGAAATACTTCCACTCGAGGAAAAT
CCTTCGTCCTCTGAGAGCAAGAGAGAAGAAGGTGAAGCAAGTCAAGTGAG
GAATGACGATAGCGATGGGGTGGAGATGTCATTGGCTCAGATGTCAGAAG
ACTTCTGTAGATGTGACATATGCAAGGCTTGGTTCCTCACCCAGCATAGT
TTGAAGTACCACAGGCGAGTTCACTTGCGTGAGATGAAGAAACTGAAGGT
GGAAAGTTTGGAGCAACTGTCGGAAGCACAGAAGGAAGCTCTGTCAGCCT
ACGGCAGGATGTACCCCTTCCATTGTAACCTGTGTGGGGAATATTTCCAG
TCGGTGCACGGCCTTAGGACCCATCGGGGGCTCAAGCACAATAATCAGAA
TCACACCACAGCAAAGACCAAGAAATTCTCGACAGTCACCAGCAGTGGTC
CTCTGGAGGAAGAAGATGATGATGATAATACAATTAGAAGTAGTGATTGG
ATGGAGAAAGCGCTGGCTCATATGTGGAATCCGCACGATACGGGTGACTA
TCGCTGTCACTTCTGTAGCTTAAATTTTAAAACAAGGAGGGATTTATCTG
GTCATCTCAGAACGATACACAAGTTCCGCCACTGTGCCACCTGTAGAGTA
CAGATCATGTCCGAGGAAGAGGCGAGAAGCCACGAACTGATGCACCTTTA
CAAACAGCAGGGGCCAGGTGAGCCAAACACAGAGCAAGCCACAAGGACCA
AAACTAGGGACAAGCCTCTTGTAGTGGGACCTAGCCAATCAGTTGGTGTC
AAACGCTCAGAGGTTGAGAGTGTGGTTGCCTCCAAGTCCAAGTCTGATCG
GCGCTTGCACGCCTGCGACGTCTGTAAGGCCACGTTCCTAACACAGCACC
ACTTGAACTGCCACGTCGGAATCCACATGCGCGAGATGAAAAAACTGAAG
GCGGAAAGCGTGGACCAGCTGGCAGATACGCGGAAGGAAGCTCTGTCGGG
CTTCGCCAAGATGTACCCGTTCCGGTGCGAGGTGTGCGGGGAGCGTTTTC
AGACGAAACACGGCACGGAGACCCACAAGGTGGTGAAGCACTACCAGCAT
TATACAACGGCAAACACCAAAAAGGTTCCAACGGTCGGCATTGTCCCCGA
CGGCCATCTGGTAGCGTACAACAAAAGGCGCGGGTTCATTTACAAGTCCT
GGCAGGAGTAA
Gene-mRNA-Prot
The following exon feature(s) are a part of this mRNA:
Feature NameUnique NameSpeciesType
Blg00204.5-exon-Sc0000026-1570713199:93294..93575Blg00204.5-exon-Sc0000026-1570713199:93294..93575Branchiostoma lanceolatumexon
Blg00204.5-exon-Sc0000026-1570713199:93672..95397Blg00204.5-exon-Sc0000026-1570713199:93672..95397Branchiostoma lanceolatumexon
The following polypeptide feature(s) derives from this mRNA:
Feature NameUnique NameSpeciesType
Blg00204.5Blg00204.5-proteinBranchiostoma lanceolatumpolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Sc0000026genomeSc0000026:93294..95397 +
Properties
Property NameValue
GeneIDBlg00204