Blg00204.3 (mRNA) - B. lanceolatum

Overview
NameBlg00204.3
Unique NameBlg00204.3
TypemRNA
OrganismBranchiostoma lanceolatum (Amphioxus)



Sequence
The following sequences are available for this feature:

mRNA from alignment at Sc0000026:89311..95458+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>Blg00204.3 ID=Blg00204.3|Name=Blg00204.3|organism=Branchiostoma lanceolatum|type=mRNA|length=6148bp|location=Sequence derived from alignment at Sc0000026:89311..95458+ (Branchiostoma lanceolatum)
TTATTGTCAACGAGAGCTGATCTCAATGTCCAGACGAAAGCCTAGTATAC CGAGGTAGGGTTTTCCATTTTTTACTGGTTGAAAAAATACACCTTATTTG GTCTCGCACCGCAGTGGTATCAGAAGTGGTCTCGCTTCATCAACGATGTT CACGAATAGAAATGTGGTATGAACAAAATAATTTGTGACATGATAATGCT ACTTGCAATATACATTAGGATAGTCTGTGATGCAAGTCTACGAAAACCAC GCCTTCCGCACTGGTATTCCAGTGCTGAATCAACGGACGAATCGGCCTCA GCACTGGTTTTCCAGTGCTGAAGAAAGTTCAGCACTCGTTTTCCAGTGCT GAAGAAAGTTCAGCACTCGTTTTCCAGTGCTGAATCGCTGTATTCCAGTG CTGAGTTTCTTTCAGCACTCGTTTTCCAGTGCTGAAACTTGTCTCAGCAC TCGTTTTCCAGTGCTGAATGGAGTTCGGCACTCGGTTACCAGTGCTGAAT GGAGTTCGGCACTCGGTTACCAGTGCTGAATGCGCGACAGAGCGGCGGTG CCAGGTCACGGGTCATGTCAAAGGTCATGCAGCACTGGTTACCCAGTGCT GAAACCGCCGTCAGCACTGGAACCGAGTGCTGATGTACAAAAACCACGCC TTCAGCACTGGATTTACCAGTGCTCGGGGACAATTCAGCACTGGAAAACG AGTGCTGAAAAAAACTCAGCACTGGAAAACGAGTGCTAAAAAAAACTCAG CACTAGAAAACGAGTGCTGAAGTGTTTTCAGCACTGGAACGTTTTTCTTA CCAGTGCTGAGAGAAGTATTAGTCGTTAGAAGTGCCGCAGGGTCACTTGA ACTTACTTACTTTGTGATTCATTTAGAATAAACAATGACCAACTTTATTC CGACAGAATTTTGTCATTTTGTTCATTGTGTAATTGTATAGTAGATATAG GTATGAGGGATGTGTTACAAATAAACAACTTTATTTCTTTCTTTCTGGTC ATAAGTTGTATCTTTGTTTCGTGACTGTGATGTGCGACACAGCTCTTTTG TCGGTCGCGTCGAGGATTTATAGTCAGAGCAGCGTCAGAGCACTTTACCC CGGTAATATAGAAATTGACTCTGTCAATAAGGGACGGAAAGTTTTTGACG TCGCCAACTTCTAATACATGGTTATCGAAGCTTTTCAGCCAGTGTTCTGA ATACGTTAGTCTATCCTGTTTGCATTGCTGGCGTTATTACTGATTTTGCA TCTACCACATATCCCTAGAATACACCGTTTCTAAAAATGGCGAATTTATG TACCCCGCGAATTTATGTTAACCAACGTTACTCACTCACTCACTCAGGTT TGCTTGCTCCCAAGGGGAGCGTGGCGCCTCGGCAAACCCTTCTCCAGGCC GTCCTGTTCTGCGCTGTCACCCAGGCAGTGGCGATGGTGTGGCCGACTGC CTGCAGGTCTCTGTTGACTTGGTCGGTCCAAGTCCGTCTGGGCCTCCCTC TGGGCCGAGCCCAGGTGGGTGGGGGGGGTTCCTTCAGTAGGGAGGCGGGC TCCAGTGGTGGCTCTGCCCTGATGAGGTGTCCAAGGAGACGGAGACGGGC AGATCGAAGTTTGCCCGACAGTGGTGGTTGGTTCGACCTCTCACGTAGGA TGTCGTTGGAGATGTGGTCGTACCACCTGATTCCCAGGATCCTCCTCTGG CACTTGGTGTCGAAGGCATCAAGGCGGCACTCCTGGGCAGCAGTTAGGGT CCATGTCTCCCCGCCGTAGGTAAGGATGGGCAGGACCAAGCTGTTGTACA GCCTGATTTTGGTTTGAGGAGAAATCCTTCTGCTGCACCACACTCGGTCC AGGTTGGCCATGGCTGAGGACGCACGACCGATGCGGAGGTTGATGTCGAC GTCGCACTTGCAGTCGGACGTTATGGTCCCTCCAAGATAGCAGAACCTGT CGACTGGTTCCACACGGTGCGTGTTGATCACCAAGGCAGCTGGGGGGGCC TCGTAGTCACTGAGAGACTGTACCTTCGTCTTCTCCCAGCTGACCATCAG GCCGAGAGGTTGTGTTTCCCTGTCCATGACCTCTAGGGCAAGCTGGAGCA CATCTAGGAGTTCGGCTAGGATTGCCACGTCGTCGGCATAGTCCAGGTCA GTGATGGTGATGTCGCCGAAGCTAGCACCACAGTCGCACTGGGCCACAGT TCTTCCCATGACGTAGTCAATGGCTGTGTTGAAGACTGTCGGGGCTAGTA CGCAACCCTGGCGGACGCCACTGTTGATGGTGAAGCTGTCTGACATCTTC CCATTCACTCTCACGCAGGAGGAGGTGTCGGAGTAGAGGAGTGAGAGCAG CTTGATCAGCTTGGCCGGGACACCAATGATCTTGAGGATCTTCCAAAGAG CTGGTCTGTCCACAGAGTCGAACGCTTGTTTGAGGTCGACATAGGCCGCG TAGAGGGGTTTCCTGTACTCCCTTCTCCTCTCAGCCAGTAGACGGAGGGC TAGGATCCTGTCCACCGTGGAGCGGCCTGGTGTGAAACCACTCTGCTCCC TTCTCTGCTTGCGGAGGAGAAGTGGACGTAGCCTTGCTAGGAGGACGTTT GCGAACACCTTGCCCGGGACACTCAGTAGGGTAATCCCTCTGTAGTTGCT GCATAGGTCCTTGGGCCCCTTCTTCCAGAAGGGGAGAATGACACCAAGCA GCCAGTCCGCAGGGATGGCCTCGCTGTTCCAGATGGCTGTGAACAGATGT TGGAGCTGGTGAGCTACTGCAGGTCCGCCCTGCAGTAGCAACTCTGGCGC GATGCCATCGGCTCCGGCAGCCCGCCCGGCTTTGAGCTTCTGTATGGCCT TGGCCACTTCATCGAGGACGGGAGGTCCAGTGGGGACAGAGTCGTCCTCG GTGGCTGAGGCAGCCTGTTCGTCTAGCTGAGGAGAGGGGGTGGGGGGAGG GCGATTCAGAAGACTCTGGAAGTGTTCCCTCCACCGTGCTACCTGTTGTT CAGGGGCGTCAGGTATGGATCCATCCAGAGCTTTCACAGGGGCCGTAGGG GGGGTTGACTTCCCGGAGAGGGTCTTTAGGGTCCTGTAGAGGGACGTTAC GCCATGGATAAATTTCAGTGAAGTCCGGAAAAATACTACTATATTTGTCA GCACTCGGTTTCCAGTGCCGAAGCTTGTCTCAGCACTCGGTTTCCAGTGC TGACATCGAGTTCTCCAGTGCTGAACTCCACTCAGCACTGGTTTTCCAGT GCGGAACTAAACTCAGCACTGGTTTTCCAGTGCTGAACTAAACTCAGCAC TGGTTTTCCAGTGCTGAACTAAACTCAGCACTGGTTTTCCAGTGCTGAAG CCACTTTCAGCACTGGAACCGAGTGCTGAAAAAGGAGAGCGTGGTTTTCG TAGTTTTGCGTCTCTGATTGTTAGTTGGCTTTTTAGTTTATCAGAAAACC TCACATCACCTCACAACTCCCTCCACCTGCTCCACAAAAACACTGAGAAA GGGGGTGGGGTGGAAGTCGTGCAAAATCAGGTTGTCCCTACTACCCTAGT TCCAGTCCAGAAATCAAACCCTCCCTAGTTCCTGGTCCAAATCGCTACAA CCCCTCCCTAGTTCCTAGTCCAGATGCTTGGACCCTACCCCCTTCCAATC CAGCCTCTTCCGCGACCCCTCTGCAGTTTTTTTAAACAGCCCAGTGCATC ATCATCTCATCTTGTCGTGAAAGTGTCACGGATGAGCATCACCCTCCTCC TCCAGTCCTCCCTGTCCTCCATTGCTCTTGGCAGTTCTTAACAGCCCAGT GCAGACTTCCTTTTTGTATCTTGTAAAAATTTGCTTCTCTTACCTTCTGT TAAAAGAAACTGTGTGCCATGTCAAAGTTGTAACTTCTTATTGTAGCTGC TGCTATAGTGATATAGCCAGCTCTAACACCATCTCATGTCTGTTATGCAT TTTTAGACAATAAATGAACAACTGCAAACTTTAATGATTATGTTTCCTGT CTTCCACAGGAAGTTGGGCTGTGCTGATGTTCTCACCAACATCAAACAAG AACCTTACGACCCCACCTTAGACGGTTCAGAAGTCAGTGGTGAGGTCACA TCCATCAGTGGAGAATCATCTCATACCAGCACAAGTAGGAGAGGCATATC TATCAAACAAGAGCCATGTGAACACATCCCACAGGGTTCACAGGTCACCA CTGTCAAACAGGAGGCATGTGACCCCATCCCACAGGGTTCACAGGTCACC ACTATCAAACAGGAGGCATATGACCCCATTTTGCAGGGTTCAAAGGTCAT CAAACAAGATGCATGTGACCCCATCCCACAGAGTTCACAGGTCACCACTA TCAAACGGGAGTCATGTGACCCCATTCTGCACGGTTCACAGGTCATCAAA CAAGTGGTATGTGACCCCATCCCACAGAGTTCACAGGTCACCACTTTCAA ACAAGAGACACATGACCACACCCCACAGGGTTCACAGGTCACACAGGGTT CACAGGTCACTCCTATCATACAAGAGACATGTGACCCCGCCCCACAGAGT TCACAGGTCACACCTGTAGGACAAGGGCCACTACGACTGCAGGGGGATAC TAACACTTCTCAAGAAGCTACTGTGGCAGGTGCAAACATACCTGACATGT CGGGCTCAGACAACAGTCCCGAGTTTGTTTGGCATGCAGAGAAAAACACA GTGATCATGACAAGCAGGAATAGCTCAAGCTCTACCTCTACCACATTTCG CACAACGCAGGGATGCACAGTCAAAGAAGTTTCTCTAGGCAGTTTACAAG TGATGGAAATACTTCCACTCGAGGAAAATCCTTCGTCCTCTGAGAGCAAG AGAGAAGAAGGTGAAGCAAGTCAAGTGAGGAATGACGATAGCGATGGGGT GGAGATGTCATTGGCTCAGATGTCAGAAGACTTCTGTAGATGTGACATAT GCAAGGCTTGGTTCCTCACCCAGCATAGTTTGAAGTACCACAGGCGAGTT CACTTGCGTGAGATGAAGAAACTGAAGGTGGAAAGTTTGGAGCAACTGTC GGAAGCACAGAAGGAAGCTCTGTCAGCCTACGGCAGGATGTACCCCTTCC ATTGTAACCTGTGTGGGGAATATTTCCAGTCGGTGCACGGCCTTAGGACC CATCGGGGGCTCAAGCACAATAATCAGAATCACACCACAGCAAAGACCAA GAAATTCTCGACAGTCACCAGCAGTGGTCCTCTGGAGGAAGAAGATGATG ATGATAATACAATTAGAAGTAGTGATTGGATGGAGAAAGCGCTGGCTCAT ATGTGGAATCCGCACGATACGGGTGACTATCGCTGTCACTTCTGTAGCTT AAATTTTAAAACAAGGAGGGATTTATCTGGTCATCTCAGAACGATACACA AGTTCCGCCACTGTGCCACCTGTAGAGTACAGATCATGTCCGAGGAAGAG GCGAGAAGCCACGAACTGATGCACCTTTACAAACAGCAGGGGCCAGGTGA GCCAAACACAGAGCAAGCCACAAGGACCAAAACTAGGGACAAGCCTCTTG TAGTGGGACCTAGCCAATCAGTTGGTGTCAAACGCTCAGAGGTTGAGAGT GTGGTTGCCTCCAAGTCCAAGTCTGATCGGCGCTTGCACGCCTGCGACGT CTGTAAGGCCACGTTCCTAACACAGCACCACTTGAACTGCCACGTCGGAA TCCACATGCGCGAGATGAAAAAACTGAAGGCGGAAAGCGTGGACCAGCTG GCAGATACGCGGAAGGAAGCTCTGTCGGGCTTCGCCAAGATGTACCCGTT CCGGTGCGAGGTGTGCGGGGAGCGTTTTCAGACGAAACACGGCACGGAGA CCCACAAGGTGGTGAAGCACTACCAGCATTATACAACGGCAAACACCAAA AAGGTTCCAACGGTCGGCATTGTCCCCGACGGCCATCTGGTAGCGTACAA CAAAAGGCGCGGGTTCATTTACAAGTCCTGGCAGGAGTAAAGAGCCCTGA CAGCCTACATGTCCTGTATTATTCATGTAGTGCACTGTGTGTTCATGGCA AGAATGTAAAGACTGTAACGTTAGTATTGTAAAGACAACCCGACCAATCG AATCACGTGAATCGCATTGAAACTCAGATTCGTATCAGCCATTTCCCG

Coding sequence (CDS) from alignment at Sc0000026:89311..95458+

>Blg00204.3 ID=Blg00204.3|Name=Blg00204.3|organism=Branchiostoma lanceolatum|type=CDS|length=1863bp|location=Sequence derived from alignment at Sc0000026:89311..95458+ (Branchiostoma lanceolatum)
ATGTCCAGACGAAAGCCTAGTATACCGAGGAAGTTGGGCTGTGCTGATGT
TCTCACCAACATCAAACAAGAACCTTACGACCCCACCTTAGACGGTTCAG
AAGTCAGTGGTGAGGTCACATCCATCAGTGGAGAATCATCTCATACCAGC
ACAAGTAGGAGAGGCATATCTATCAAACAAGAGCCATGTGAACACATCCC
ACAGGGTTCACAGGTCACCACTGTCAAACAGGAGTCATGTGACCCCATTC
TGCACGGTTCACAGGTCATCAAACAAGTGGTATGTGACCCCATCCCACAG
AGTTCACAGGTCACCACTTTCAAACAAGAGACACATGACCACACCCCACA
GGGTTCACAGGTCACACAGGGTTCACAGGTCACTCCTATCATACAAGAGA
CATGTGACCCCGCCCCACAGAGTTCACAGGTCACACCTGTAGGACAAGGG
CCACTACGACTGCAGGGGGATACTAACACTTCTCAAGAAGCTACTGTGGC
AGGTGCAAACATACCTGACATGTCGGGCTCAGACAACAGTCCCGAGTTTG
TTTGGCATGCAGAGAAAAACACAGTGATCATGACAAGCAGGAATAGCTCA
AGCTCTACCTCTACCACATTTCGCACAACGCAGGGATGCACAGTCAAAGA
AGTTTCTCTAGGCAGTTTACAAGTGATGGAAATACTTCCACTCGAGGAAA
ATCCTTCGTCCTCTGAGAGCAAGAGAGAAGAAGGTGAAGCAAGTCAAGTG
AGGAATGACGATAGCGATGGGGTGGAGATGTCATTGGCTCAGATGTCAGA
AGACTTCTGTAGATGTGACATATGCAAGGCTTGGTTCCTCACCCAGCATA
GTTTGAAGTACCACAGGCGAGTTCACTTGCGTGAGATGAAGAAACTGAAG
GTGGAAAGTTTGGAGCAACTGTCGGAAGCACAGAAGGAAGCTCTGTCAGC
CTACGGCAGGATGTACCCCTTCCATTGTAACCTGTGTGGGGAATATTTCC
AGTCGGTGCACGGCCTTAGGACCCATCGGGGGCTCAAGCACAATAATCAG
AATCACACCACAGCAAAGACCAAGAAATTCTCGACAGTCACCAGCAGTGG
TCCTCTGGAGGAAGAAGATGATGATGATAATACAATTAGAAGTAGTGATT
GGATGGAGAAAGCGCTGGCTCATATGTGGAATCCGCACGATACGGGTGAC
TATCGCTGTCACTTCTGTAGCTTAAATTTTAAAACAAGGAGGGATTTATC
TGGTCATCTCAGAACGATACACAAGTTCCGCCACTGTGCCACCTGTAGAG
TACAGATCATGTCCGAGGAAGAGGCGAGAAGCCACGAACTGATGCACCTT
TACAAACAGCAGGGGCCAGGTGAGCCAAACACAGAGCAAGCCACAAGGAC
CAAAACTAGGGACAAGCCTCTTGTAGTGGGACCTAGCCAATCAGTTGGTG
TCAAACGCTCAGAGGTTGAGAGTGTGGTTGCCTCCAAGTCCAAGTCTGAT
CGGCGCTTGCACGCCTGCGACGTCTGTAAGGCCACGTTCCTAACACAGCA
CCACTTGAACTGCCACGTCGGAATCCACATGCGCGAGATGAAAAAACTGA
AGGCGGAAAGCGTGGACCAGCTGGCAGATACGCGGAAGGAAGCTCTGTCG
GGCTTCGCCAAGATGTACCCGTTCCGGTGCGAGGTGTGCGGGGAGCGTTT
TCAGACGAAACACGGCACGGAGACCCACAAGGTGGTGAAGCACTACCAGC
ATTATACAACGGCAAACACCAAAAAGGTTCCAACGGTCGGCATTGTCCCC
GACGGCCATCTGGTAGCGTACAACAAAAGGCGCGGGTTCATTTACAAGTC
CTGGCAGGAGTAA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Feature NameUnique NameSpeciesType
Blg00204.3Blg00204.3-proteinBranchiostoma lanceolatumpolypeptide
The following exon feature(s) are a part of this mRNA:
Feature NameUnique NameSpeciesType
Blg00204.3-exon-Sc0000026-1570713199:89311..89364Blg00204.3-exon-Sc0000026-1570713199:89311..89364Branchiostoma lanceolatumexon
Blg00204.3-exon-Sc0000026-1570713199:93320..93524Blg00204.3-exon-Sc0000026-1570713199:93320..93524Branchiostoma lanceolatumexon
Blg00204.3-exon-Sc0000026-1570713199:93672..95458Blg00204.3-exon-Sc0000026-1570713199:93672..95458Branchiostoma lanceolatumexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Sc0000026genomeSc0000026:89311..95458 +
Properties
Property NameValue
GeneIDBlg00204