Blg00203.0 (mRNA) - B. lanceolatum

Overview
NameBlg00203.0
Unique NameBlg00203.0
TypemRNA
OrganismBranchiostoma lanceolatum (Amphioxus)



Sequence
The following sequences are available for this feature:

mRNA from alignment at Sc0000026:5727..12801+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>Blg00203.0 ID=Blg00203.0|Name=Blg00203.0|organism=Branchiostoma lanceolatum|type=mRNA|length=7075bp|location=Sequence derived from alignment at Sc0000026:5727..12801+ (Branchiostoma lanceolatum)
GCCAAAGTGCGGCCCGTCTGTTTGCTGTTCATGACGTCACGAGAAGGATC AACACGCCGTGACGTCATGTAGAACTCGTGACGACCGGACCTCGCGCTAC CACAGGTCACCTGTTCCCCACATACAGCCATTTGTAGCTGTTAGCTGCAC CTGTTGTTTTTTTACAGACACCNCTGTGGTTCGTGACGTCACGAGAAGGA TCAACACGCCGTGACGTCATGTGGAACTCGTGACGACCGGACCTCGCGCT ACCACAGGTCACCTGTTCCCCCACATACAGCCATTTGTAGCTGAAAGCAC CTGTTGTTTTTTTACAGACACCTGCAGGGACTCTGAATTGAACATGTGGG GCCACGGTCACGGTCATGGGCACGGTCATGGACATGGCGCAGCCAGGGAG GCCAACAGGGCCCACAGGGTGAGAGTCTAACCAGCTGTTTCACCATTTAG TTATGATTTCCTCATAACTAATAGACCCTGATACAGTCTTATTTGGTATG ATATGATCAATGTCTTGGGTTATGTATTGTGTCGGAGTCGCTGGCCTACT TTGGTTGACTCATAAGTTGTTTACGTCGTTTTTTGTATGATATGATCAGT GTCTTGGGTTCGGTACTGTAGCGGAGTCGCTAGCCTAGTTAGGTTGACTC AAAAGTTTTTTACGTCGTTTTTGGACAGACAAGGACGACGTGGCACTGCA CTCAAGTTTTGTATAACATATTTCAACAGTGCCACGTACAGAGAACAGTA TACACATTTCTACACCTGGGTGGAGTGAGGAAAGTCGTGTTAAGTGCATT TCCCAAGGGCACAATATCTGTGGCGTCAGGGGATTCGAACCCGGGACCGC TTGGTTCTGGGCCGCGAAGACCCTACCGTTACGCTACACGACGCCACAGA CTCATAGGTTATGTTGGGGGAAAGTAAGAAACACAATTCTTCTGGCTAGC TACTGTTGCTGACCATGCAGAACACAATAGAGTATCAGATGTTTCAAACA AAACAACCCAAAGAAGCAGCCAAAATGTGTAGAGCGACAGCACAAAAATG ATAGTAGAAATGTCCACGTTGACGTGATGATTATAACTAACGTCAACATT ATAAGTCATCACATCAACATTAAATCGTCTGAATTAAGGAATAGACTTGA ACAATTGAACGCACAGTCAAGAGAACGGCAGAGATCAGTCTACTAGAATT ACATCGACTAGGACAAGGCAAAGTTCAGTTTGATAAAAATAGAACAACAT CTATACTTTACTCGGTATGCCTCGGCAGTCGACTACAAAACTGATACTGC ACGGCCGTATCAGCGTTAAAACAATGGACTGGTGTTATAATAATCATAAA TGACTTTATTGCACAACAATTGTACAAGGTACAAAGTTCTATGAGGCTAA TCTACCTAATTCAAGAGTGAATAGTATCGGATCGATCATGAGCTTTTACA ATCATTGGAAGAATTTCTAACGTCTAGATATTCTTTGATATATTTTCCTA TGTGTACCATGCAGGGGTTGTTGCATGTCATATGTGTTCACTGCGATGTT TACACAATACTGTAGTGTATCCGGTAGGGGAATGCATGCCATAGCTGGAG AGTTCCTTAATCTGGCCCGTTCTCAGGTTTTCTCCAATCTAAGGAACTGT AGCTGCTGAAATATAACAATGAACTGGTTCCTATAAGTATATCGCTTAAT TCCATTATGTAAACTACAATATACTTATGAAACTGCAGCTGATAATCTTG AACAAACCTCATTGATCTTGGATCTATGGATAGTTTGGGATACAATGAAT GCTACCCTCTAGTGAATATTGACGAGTGCACGGTCTAAAGTACATGTGCA TGCGTCCCCCTCCCCATCATTCTTTCAAAGGGGAGGGGCCAGGTTTTAAG ACCAGGTGCGCCAGAGTCAACACACCTGCGTAGTTTATGTCTTGGTGTTG TTTGGAACTTTGAACGCGCGACTGTGCGTAGGTTGGACATGCATTGTGGT CTCGGAGGGCGGAAGTGGCTTAACGTTAGCTACTAGCGGCTCTGTACAAA ATTGCAATTGCATATTCTATTCAGTATGCTTTGCGATAAAAGGCCTTGTC GTCGGGGCCTTGTCGTCGGGACAAGTGGGTAATAAGTTTTCGGCCCGGGA ACAACCTTGGGCCTAGGCAAGCGGGAACAAATCTAAATACACACCAAGAC AAACAAACAAACAAACAAACAAACAAACAGACAGACAGACAGACAGACAG ACCGGAAACAATACAGTACATCCGTTTTCACGGAGATAAAAATACATCCG TTTTCACGACAAAATATAGGGTTTGTTTGTCTTGGTGTGTGTTTAGGTTT GTTCCCGCTAGCCCAGGTCCAAGGTTGTTCCCGGGCTGAAAAAGATTTAT TCCAACGACGTTCCCCATTGCATTTAGGAATGCACCTCATGTATAAGCAG CGACACCTGTGCTGCATTACTATGTGAACCAGTCAGAATTGCCTTGAAGA AGGTGACAGAATGAGATGGTCACCGAATTGTCGGTGGAATAAATCTCTTG GTTGTGTAAAAAGAGTCTTTTTATCCTGGACATACCTATGTTATGTTTTG CCAAGGAACTTACAAAAACTCTTAATATTTCCTGGAGGTATGAGATTTCT ACGGACTGGCTGTAGATTCTAGCCGGCTGGCTACGATTTTGCCTCCGTGG ATATCTGCTTGGAGATCACAAGAGTTGAGCATGTAATGTGAGAACTGGAC ATAGGTATGAGATTTATATAGCTAGATGTTGTTATATATTTTTTACAGGA AGAGATGAAGGCAGAACGTCAGGAGCACAGAATGCACAACAAGGCTGCGC ACGCGGCCGCACACGGCAACTTTGTCAAGGCGGCCATGTTTGAGGTAAGG AAACAAGTGCTTTTCAAAAAAGCTGGCGTTTTGGCTACCTTTATGAGTGT GAATTGTCTTTTCCCTTTTCTTGAAGTAAAATCTGCCAGAGAAAGTCACT CAAGGGCTGTTGAGTCTATAAGAAAAATTGTCATTTTGGGAAAGGAGTAC TGTTTTAATAGAGAAAGGCAGATTGGGGAAAGCAATTTTGAAGTTACGGC ACTTAACTTAAGTGCTTTTGAAAAAGCTGGTCTTGGCCTACAACTTGTAC TTATTTCTAAAATGTACAATAGGCTCATTATAAAAGCTATCAATGTAATT ATGTACATAGCACGCAATAAAACATACAATTTGAAAAAACACCATTGAAT CATCAGCACTATGGTAATTAAGTGAAATAGAAGTTCATAACAGCTAAGGT TCTATCTAAAATGACTACCAAATGTCAAACAAATGTTCAAACCAATTAAC AGCTTCCTCATCCCTATCATTAATATCAATTATTATTATTTATTGATCAT AAACTTATTATTATTATTATTGTTATCATTATCATTATTATTATTATCAT TATTAGGGTTTTCGCATTTACAACATTTCTTCCTTATTTTCCTGGATAAT TTTGCTAAAATTCATGAAAATTCCTATATTTTTGGGCCGAGCGGCGTCAC TTTCCACGTCCGTGTTGTCTGAATGAAGTCGATACTGAACAATGGAGCAT TTGCTACTGTAACAAAGGATCGCTGTTTTGCAAACAACATCAAGAGCCTC TGTTTACATCGGGGATAGAAGTTTAGTGGCGAGTGTTTTACAAGAATCAT CTTACCGCGCATAGGAGCCGCTGCACGGTATTTTCCATTACAATGAACAG AAAAATTCGAATGCCGGGTTTGGAATCTATGAAGTCCTGTTCATAAGACA AAGGCCTTGTATATATTAAATGAATATTTAAAAATAACAAATATAAAATA TTTCTTTATTTATTAATGAAAAAAANAACAAATATAAAATATTTATTTAT TTATTAATAAAAAAATAGAAATATGATATTCATAAATATGATATTGATAG ATTTATATAATATTGATATATATTTTTGATATTTTATATCTAAAAAGAAA GAAAAAAACATGCACGGACTCGATCCCGGATCGTCCGGATCTAAAGCACT ACGACGTTCCCAGCTGAGCTAAGATGTAGTGTGTAATACTAATATGTGGC TCAGTACATAATGCTTTAACCTCACTACATGGTATAATTTATGTCGATTT TTGGTCGTTTTCTTGATGTAATTATTATTTTTTTTCTGCAATCTTGTGGT ATAGATGTGATATGGTCATTTTTCAGGATATCAAAGTCCGAAACCACAAT GCAATGATATTTCCGAACAGTTGTAGCAGTTACATGCGGTCGCCCTCCTA TGTGTCATGCAAATCAAGCCTGCCTGGTTTTTCTTGCTCCCTTGCCATAT AAGGCAACGGCTTTACAAGAATTTTAGAAGGTATTGCCATATAAGGTCTT ATGGTGTGCGACACAGTGTTGAAGCTTCCTGCATGCATGGAATGTAAGAG CGAAGACATTGCGTTTCGGCGCGAAGCAAAACGTAGAATAAGAAATGCGC AACAAAAGGACAAAAAAATCGGGCTATCAATACTGGCAAATACTTCAATA TATGTTACACAGCGGCTTGCAGATAGCATAACTGATTCTCAAAAGTCAAC AACTATAGAAAGTCAACAATAACACTTTTGAGCACACATCTTGTCGACAC ATGTATCAACATCAAGATTGGACAATCTAAAATGTCTTCATTTTATTTGC ATATAAATTCATAGTTGGTTAGTGGTCCAAAACCTGCTGTTCGACAAAGT GTTATATTTGTTGAGAAAAAAAAGCTTTAATAAGGGGCCAGGGCAATCTA ATTGAATTGATGATTATGTTTGCAAACTATATGTATATATATACATATAT CTCACTTTACTCACCACACGACTTTCATAACGTTTTAAGGATGTATAATA TATGTATCAACACCACTTACGTTGATGAAGGTTAGACATCCAGGTAATAT TGATAAGTTACTTCAGTGACGAAAGATAGTGGATGCTGTCTGAAACGTCT CTGACTGTTTCAAAATCTTATCCAGTTGCTTGAGTAACTATTTTTGGCGT ATCAACAACACTTGTTCTAAAACACATGCTCTGTCCCTCTCCGTTGCAGG TGGCGGCTGCCGGAGCGCATAACCGTGCGGAGAACGCCCACCACCGCGAG GTTCACGCTGCGCACGCGGCGATGCACCACGGGCCGCACGGCCACCACCA CCATGGGCCCGCCGCCTGCCCGCCCCCACGAGCTCCTGCTGTGCACGTCC ACGTGAGTTGGTCTTATTATCTAATATCTCAAACTGTTGATATCGTGGAT AGTTGTTAGGTCCTGTTACTTTTTATATATGTTTGGAACTGATAGAAGCT TCAGTGTGTTCCCAAGTAACACAAACAATTAAAAAACCGCCCCTGCAGTT CCAGAGGAAGCTGCTAGAAGGCCCAAACCTACACTACTTCTTTATTACAT CACAAGCTATCTGCCACCCAGCAATCAAGACCACAACACGTCCAGGTCAA AATATACAAAAATTGAAGTTCTGCTGCAGTACCAAGGTCACATACCAGGG GGCCCAAAATCGACCTTGATTTTCGGCTTCACATCACCCGCCCACATACC AAATATCATCATAATCCATCAAGAGGCTCTTGAGTTATGCTGACTAGAGC AGTCCGGAAACACAAACAGACAATCAAACAGACAAACAGACAGACACACC CAAAACAATATCTCCATTTTTCATGGAGATAAATGTTGGATCTATATCTA ATCACTGTCGTTTAGAGAAGAAGCTTTGAACGAAAACCTGATAGTCAAGC AATTGAAAAAGGATTACTTTTTGCCCTCAGCACACCTACGTGAACCCGAC ACCTCCCGTGAGTTATCCAACAGGTACAGCAGCGCCCCCACCGGCGTACC CAGGAACTGCACCAGGTCAGTGCACTACATCACGCTTTTGTCTTAAAATT CATGCCTGGATGAAATACATACTAGCCTGGAAATCTATCAATTTCTACAC TGCCATCTAGATCGACTTTCCTTATTCGATCCGCGCTAATGATTACTAAA GCATATGGATTGATATGGGGTATACGGAACAGTGGTATGCCAAGTATCAT AGTCGGTGGATTATGAATGAGTGGTTTATTATGATTATTATGATCAGCTA AGAAAAATACATCGCAGCCTCAGGCTGAATTGTGTATTTTGTACAAACAT AACTTAAAACCAACTGTTGACGTCTAAGCAAGTCACAAATTGACATTCAT ACATTAACCATCTTAACTGTATAACAATTCTAAAACCACAATTGATACAA AATTAAAACAGATAGATTTAGAACAGATAAGCTTGGATTTAAAGTATTAA TACGCAGTTACCAGTTGCAACAGCTAACATATATTTAATTTTCTGTACGT GTAAATACTACAGTTACTGTTCATTTAAAAGATTTGTCGTATAGGGAAGA GGACTGTCCGTATATCTGTTTGTTCTTCTTCTGATAGCTGACAGAAAGTG TTTGTTATCAAGCTACTGAAAGCTGTTAAACATTTATTTTCTTTCTTTAC TGTCCAGGGTACCCGCCGACTACCGGATCCGCGTACCCCCCAGCCCAGCC CGCGGGATACCCCCCTGCCCAGCCCGCAGGATACCCCCCTGCCCAGCCCG CGGGATACCCCCCCGCCCAACCTGCAGGATACCCCCCTGCGTACCCCCCT GCACCGGGCTACCCCAACCCTTCCTACCCTGGATACCCGCCAAACTAGTG AACCGGGCCGAGTACCAAGCAGATGTCTGCTAGAGGAAATCGCCACATCT CTCTCGTGTTTATACTTGTTTGTGATCGTCCTTTCCATAATTGTGTGGAT ACAATACAAAACATACAATAGGGAGGCGTAACGATTTCTCTCTCACTGAC GTCGAGTTTTCAATCTCTAAAGTTTGAAAAAGTTCCCTAAAAATTGCCAG TATGCAAGTTAAAGGGCATCACAGAGTCAATGCATCATGAGGAAGAGACG GCCGGCCGTTGGAGTATCTTCTTTTGTAATAAAAGGGATATTGATTAAAT GACATGATGAAGTGGACTATCATTG

Coding sequence (CDS) from alignment at Sc0000026:5727..12801+

>Blg00203.0 ID=Blg00203.0|Name=Blg00203.0|organism=Branchiostoma lanceolatum|type=CDS|length=600bp|location=Sequence derived from alignment at Sc0000026:5727..12801+ (Branchiostoma lanceolatum)
ATGTGGGGCCACGGTCACGGTCATGGGCACGGTCATGGACATGGCGCAGC
CAGGGAGGCCAACAGGGCCCACAGGGAAGAGATGAAGGCAGAACGTCAGG
AGCACAGAATGCACAACAAGGCTGCGCACGCGGCCGCACACGGCAACTTT
GTCAAGGCGGCCATGTTTGAGGTGGCGGCTGCCGGAGCGCATAACCGTGC
GGAGAACGCCCACCACCGCGAGGTTCACGCTGCGCACGCGGCGATGCACC
ACGGGCCGCACGGCCACCACCACCATGGGCCCGCCGCCTGCCCGCCCCCA
CGAGCTCCTGCTGTGCACGTCCACCACACCTACGTGAACCCGACACCTCC
CGTGAGTTATCCAACAGGTACAGCAGCGCCCCCACCGGCGTACCCAGGAA
CTGCACCAGGGTACCCGCCGACTACCGGATCCGCGTACCCCCCAGCCCAG
CCCGCGGGATACCCCCCTGCCCAGCCCGCAGGATACCCCCCTGCCCAGCC
CGCGGGATACCCCCCCGCCCAACCTGCAGGATACCCCCCTGCGTACCCCC
CTGCACCGGGCTACCCCAACCCTTCCTACCCTGGATACCCGCCAAACTAG
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Feature NameUnique NameSpeciesType
Blg00203.0Blg00203.0-proteinBranchiostoma lanceolatumpolypeptide
The following exon feature(s) are a part of this mRNA:
Feature NameUnique NameSpeciesType
Blg00203.0-exon-Sc0000026-1570713199:5727..5847Blg00203.0-exon-Sc0000026-1570713199:5727..5847Branchiostoma lanceolatumexon
Blg00203.0-exon-Sc0000026-1570713199:6001..6144Blg00203.0-exon-Sc0000026-1570713199:6001..6144Branchiostoma lanceolatumexon
Blg00203.0-exon-Sc0000026-1570713199:8525..8620Blg00203.0-exon-Sc0000026-1570713199:8525..8620Branchiostoma lanceolatumexon
Blg00203.0-exon-Sc0000026-1570713199:10826..10978Blg00203.0-exon-Sc0000026-1570713199:10826..10978Branchiostoma lanceolatumexon
Blg00203.0-exon-Sc0000026-1570713199:11557..11641Blg00203.0-exon-Sc0000026-1570713199:11557..11641Branchiostoma lanceolatumexon
Blg00203.0-exon-Sc0000026-1570713199:12284..12801Blg00203.0-exon-Sc0000026-1570713199:12284..12801Branchiostoma lanceolatumexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Sc0000026genomeSc0000026:5727..12801 +
Properties
Property NameValue
GeneIDBlg00203