Blg00195.0 (mRNA) - B. lanceolatum

Overview
Name
Unique NameBlg00195.0
TypemRNA
OrganismBranchiostoma lanceolatum (Amphioxus)



Sequence
The following sequences are available for this feature:

mRNA from alignment at Sc0000026:1399257..1400664-

Legend: CDSexonpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>Blg00195.0 ID=Blg00195.0|Name=Blg00195.0|organism=Branchiostoma lanceolatum|type=mRNA|length=1408bp|location=Sequence derived from alignment at Sc0000026:1399257..1400664- (Branchiostoma lanceolatum)
ATGGAAATTTTCATGAAACGTACCAGCGAGGACATGGCCGTCTTTAAGAG CATGGATTCCAGGGTTCGGGCTCTAGAGGAAGGACGGGACAAAACGGAGT CGGCCCTCGCTGCCACCAACGAGAGCGTGGAGGCTGCCCTCGATACTTGC AACGAGAACTCAGAGGTCCTGGGAATGATGAAACCGACGATTTGGTCTCT AGAGAAAGGACAGGACAATTTGGAGTCGGCCCTCGCTACTACCAATAAGA GCTTGGAGGTTGCTCTCGATACTTGCAACGAGAACTCAGAGGTCCTGGGA ATGACGAGACTGACGATTTCGGCTTTAGAGAAAAGACAGGATAAGTTGGA GTCGGCCTTAGTAGCCACCAACAAGAGCTTGGAGGCTACTCTCGATACTT GCAACGAGAACTCAGAGCTGCTTGGAATGGTGAGACCGACTATTTTGGCT TTAAAGGAAAGACAGGATAAGTTGGAGTCGGCCTTAGCAACCACCAACGA GAGCTTGGGGGCTGCCCTCGATTCTTGCAACGAGAACTCGGAGCTGTTTG GTATGGTGAACTCGACGATTTGGGTTCTAGAGGAAGGATATAACAAGCTG GAGTCGGCCCTCGCTGCCACCAATGAGAGCGTGGAGGCTGCCATAGCTAC CTGCAACGAGAACTCAGAGGTGCTAGGAATGGTGAGACCAATGCATGCGA AAGTTGAAAGGTTGGAGAACAAAGTTGTCAGCGGAGCACAGCTGCAAGAG GATTCAACAACAAGGTGTAATACAAACTGTACAGCGACCTCCTTTTCCAC GGAGCTTATGGCGGAAATCATAAGTCGATTAGGAGAGTCAAGCGGAGAAC AAAAAGAGTCAAGCCGAGAACAAGAAAAGTCAAGCGGAGAACAGGACGGG TCAGGCGGAGAACAGGAAGAGTCAGACGGAGAACAGGAAGAGTCAAGCGG AGAACAGGAAGAGTCAAGCGGAGAACAGGAAGAGTCAAGCGGAGAACAGG AAGAGTCAAGCGGAGAACATGAAGAGTCAAGCGGAGAACAGGAAGAGTCA AGCGGAGAACAGGAAGAGTCAAGCGGAGAACAGGAAGAGTCAAGCGGAGA GCAGGAAGAGCCAAGCGGTGAACAGGACGAGTCAAGCGGAGAACAGGAAG AGTCAAGCGGAGAACTGGAAGCGTCAAGCGGAGAACATGAAGAGTCAAGC GGAGAACGGGAAGTGTCAAGCGGAGGGCAGACAGAGTCAAGCGGAGAGCA TGAAGAGTCAAGTGGAGGGCAGGAAGTGTCAAGTGGAGAACAGGAAGAGT CAAGCGGAGAACAGGACGAGTCAGGCAGAGAACAGGAAGAGTCAAGCGGG GTACAGGAAGAGTCAAGCGGAGAAGAAAAGGACTCAAATGGAGAGCAAGA ATGGTTAA

Coding sequence (CDS) from alignment at Sc0000026:1399257..1400664-

>Blg00195.0 ID=Blg00195.0|Name=|organism=Branchiostoma lanceolatum|type=CDS|length=1257bp|location=Sequence derived from alignment at Sc0000026:1399257..1400664- (Branchiostoma lanceolatum)
ATGGAAATTTTCATGAAACGTACCAGCGAGGACATGGCCGTCTTTAAGAG
CATGGATTCCAGGGTTCGGGCTCTAGAGGAAGGACGGGACAAAACGGAGT
CGGCCCTCGCTGCCACCAACGAGAGCGTGGAGGCTGCCCTCGATACTTGC
AACGAGAACTCAGAGGTCCTGGGAATGATGAAACCGACGATTTGGTCTCT
AGAGAAAGGACAGGACAATTTGGAGTCGGCCCTCGCTACTACCAATAAGA
GCTTGGAGGTTGCTCTCGATACTTGCAACGAGAACTCAGAGGTCCTGGGA
ATGACGAGACTGACGATTTCGGCTTTAGAGAAAAGACAGGATAAGTTGGA
GTCGGCCTTAGTAGCCACCAACAAGAGCTTGGAGGCTACTCTCGATACTT
GCAACGAGAACTCAGAGCTGCTTGGAATGGTGAGACCGACTATTTTGGCT
TTAAAGGAAAGACAGGATAAGTTGGAGTCGGCCTTAGCAACCACCAACGA
GAGCTTGGGGGCTGCCCTCGATTCTTGCAACGAGAACTCGGAGCTGTTTG
GTATGGTGAACTCGACGATTTGGGTTCTAGAGGAAGGATATAACAAGCTG
GAGTCGGCCCTCGCTGCCACCAATGAGAGCGTGGAGGCTGCCATAGCTAC
CTGCAACGAGAACTCAGAGGTGCTAGGAATGGAGAGTCAAGCGGAGAACA
AAAAGAGTCAAGCCGAGAACAAGAAAAGTCAAGCGGAGAACAGGACGGGT
CAGGCGGAGAACAGGAAGAGTCAGACGGAGAACAGGAAGAGTCAAGCGGA
GAACAGGAAGAGTCAAGCGGAGAACAGGAAGAGTCAAGCGGAGAACAGGA
AGAGTCAAGCGGAGAACATGAAGAGTCAAGCGGAGAACAGGAAGAGTCAA
GCGGAGAACAGGAAGAGTCAAGCGGAGAACAGGAAGAGTCAAGCGGAGAG
CAGGAAGAGCCAAGCGGTGAACAGGACGAGTCAAGCGGAGAACAGGAAGA
GTCAAGCGGAGAACTGGAAGCGTCAAGCGGAGAACATGAAGAGTCAAGCG
GAGAACGGGAAGTGTCAAGCGGAGGGCAGACAGAGTCAAGCGGAGAGCAT
GAAGAGTCAAGTGGAGGGCAGGAAGTGTCAAGTGGAGAACAGGAAGAGTC
AAGCGGAGAACAGGACGAGTCAGGCAGAGAACAGGAAGAGTCAAGCGGGG
TACAGGAAGAGTCAAGCGGAGAAGAAAAGGACTCAAATGGAGAGCAAGAA
TGGTTAA
Gene-mRNA-Prot
The following exon feature(s) are a part of this mRNA:
Feature NameUnique NameSpeciesType
Blg00195.0-exon-Sc0000026-1570713199:1399984..1400664Blg00195.0-exon-Sc0000026-1570713199:1399984..1400664Branchiostoma lanceolatumexon
Blg00195.0-exon-Sc0000026-1570713199:1399257..1399832Blg00195.0-exon-Sc0000026-1570713199:1399257..1399832Branchiostoma lanceolatumexon
The following polypeptide feature(s) derives from this mRNA:
Feature NameUnique NameSpeciesType
Blg00195.0Blg00195.0-proteinBranchiostoma lanceolatumpolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Sc0000026genomeSc0000026:1399257..1400664 -
Spatial Expression
in the tripal_feature_cv_term.tpl.php
Properties
Property NameValue
GeneIDBlg00195