Blg00194.0 (mRNA) - B. lanceolatum

Overview
Name
Unique NameBlg00194.0
TypemRNA
OrganismBranchiostoma lanceolatum (Amphioxus)



Sequence
The following sequences are available for this feature:

mRNA from alignment at Sc0000026:1707286..1709874-

Legend: CDSpolypeptideexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>Blg00194.0 ID=Blg00194.0|Name=Blg00194.0|organism=Branchiostoma lanceolatum|type=mRNA|length=2589bp|location=Sequence derived from alignment at Sc0000026:1707286..1709874- (Branchiostoma lanceolatum)
ATGGGGTGGCTTTCGCCACTGTCCACACGTATTGCAACGACGGCACTCAT ACTGAGCTGCTGGAATGTACGGACAATGCTGGATCGCGACGACTCAGGCA GACCCGAACGATTGTCAGCGATCATAGATCGGGAACTGCACCGATACCAC ATCGACGTGGCTGCTCTATCTGAAACAAGACTAAAGGGTCACGGACAGCT CACAGAGGAGCACTACACGTTCTTCTGGTCAGGTGGTGAGGTGCACCAAG CCGGCGTCGCTTTCGCTGTACGCAAGGATATTCTCACAAGACTTGCCGCA GCGCCGACTGTGATATCCAACCGCCTTTGCAGTGTTCGCATCAGGCTGGC TGATAAAAGATTCTTGACCTTGGTGGCAGTATATGCCCCAACTATGACGT ATGACGATGCCACGAGGGCGAGCTTCTACGCGGACCTCGGGCTTATACTC AATGACGTACCAAAAGCGGACAAACTTATTGTCCTCGGTGACTTTAATGC ACGCGTGGGGAACGACCGTCCCGGATGGAGCCGTGTGCTGGGGACGCAAG CAAGAGGCAGGACAAACTCAAATGGTAGCTTGTTGCTGGAACTCTGCACA GAACTGGACCTTGCAATCACAAATACCTTCTTTGCCATGCCTGACAAGTG GTACTACTCCTGGATGCACCCCCGCTCTCGTACCTGGCACCTGCTGGATT ACATCCTTGTGCGAAGAGATGACCTGAGGGACGTGTATTCTACAAGGGTG ATGCGAGGTGCGACCTGTGGAACAGACCACTTCATGGTGAGGGCTGTATG TAACCTGCGTATTGCACCTGTCCGCCGAAAACGCGCCAGACAACCCTTAC GCAGACTTCATGTGAGTCTGCTTCCACAAAAGGCACAAGAGCTGGAAAAT AAGGTGTCTGACTGCATCAACCAGCTGCAGGGTCCCGAAGTGGAGGAGCT CAGTGTGAATGAGCGATGGGGCCAAATAAGCAAAGTTGTTTACGCTGCTG CAAAAGAGGTCCTTGGGCACCCACGAAGGCGGCACGCTGACTGGTTTGAC CAGAACGACACGGACATACAGATGCTGCTAGCTGAGGTGAGGGCTCGCCG CCAGCAGTCTTTGGCCGGAGTGTGTACAAGACGGGCAACAGAGCAACTGA GAGAAGCCCGCTCGAAGCTCCAACGTGTCACACGTCAAATGAAGAACGAC TGGTGGGACCGCAAGGCGGACGAGCTACAGGGGTTTGCTGATGCACATAT GACCAAAGCCTTCTACGACGGACTGAAGGAGGTCTACGGGTCCCGACACT CAGGCTCAAACCCCGTACTCAGCGCAGATGGGGCGACCCTACACACAGCG TCAGACGAAATCCTGGAGAGATGGAAGGAGCACTTCCAGCAGCTTCTCAA CAGACCGTCTACTGTCGACCAAGCAGCCGTTGAGAGACTTGAGCAGCGCC CTGTGCGCCAAGATCTGGACGGCCCACCTACGTCGGATGAGCTGCAGAAA GCGCTGAAGTCCCTCAAGTCCGGAAAGGCTCCAGGTGTCGATGGTATACC GGCTGAGGTATTAAAACACAGTGGCAAGGTGTTACACAACGAGCTCCTGT GGTTGTATCGGAAATGTTGGGAAACCTGCGCCGTCCCTCAGGACTTCAAG GACGCCATTATAGTGACTATTTACAAACGCAAGGGTGACCGTCGTGACTG TGGCAACTTTCGTGGTATATCGCTGCTTAGTATTGCAGGCAAACTACTGG CAAAGGTTGCCTTGGCAAGACTGCAGATAATCTCGGAGGCAATACTACCG GAGAGCCAGTGTGGTTTCCGTCCCGGCCGCGGTACCACAGACATGATCTT TGCGTTGAGACAACTTCAAGAAAAGGCTATTGAACAAAGGATGGGACTGT ACATTGTCTTTATAGATTTCACCAAGGCCTTTGACTCTGTAGGAAGGGAT GCTTTATGGCGCATCCTGGAGAAGTTTGGATGTCCCTCAAGGCTTCTTGG AGTCATCAAGGCATTCCACACAGACATGCGTGCCATGGTGTCAGTCGACG GCGAGGCCTCGGACTTCTTCCAGGTCCTTCATGGGGTCAAGCAGGGATGC ATACTGGCCCCCACTCTGTTTGCGTTATTTCTCGCGGCAGTCATTGAAGA AATGTCAGATGACGTGTTGGAAGGTATCTACATCAGAACTCGGTCTGACG GTGGTCTTTTCAATCTCTCAAGACTAAAATCCCAACGCCACGTACTGGTG AAGTGCATCCGTGAACTACTTTATGCCGATGACTCTGCTTTAGTGGCTCA CACTCTCGGTCGCATTCAACGGCTATTGGAGGGTTTCGCGGGAGCAGCTA GAGCTTACGGTTTGACCATAAACATCAGGAAAACAGAGGTTCTCCACCAG CCAGTACCGGGGCAGCCACACACACCTCTGCTGGTGCTGCTGGACGGAAC GCCCCTAGCTGAGGCAAAAACCTTTACTTACCTTGGCTCTACACTGTCAA ACGACAATTCCATGGACTGCGAGATCGACGCACGGAGGAGAGCGGCCTCG ACTGCATTCGGTCGCCAAAGGACCGCCTGTGGAATGTGA

Coding sequence (CDS) from alignment at Sc0000026:1707286..1709874-

>Blg00194.0 ID=Blg00194.0|Name=|organism=Branchiostoma lanceolatum|type=CDS|length=2589bp|location=Sequence derived from alignment at Sc0000026:1707286..1709874- (Branchiostoma lanceolatum)
ATGGGGTGGCTTTCGCCACTGTCCACACGTATTGCAACGACGGCACTCAT
ACTGAGCTGCTGGAATGTACGGACAATGCTGGATCGCGACGACTCAGGCA
GACCCGAACGATTGTCAGCGATCATAGATCGGGAACTGCACCGATACCAC
ATCGACGTGGCTGCTCTATCTGAAACAAGACTAAAGGGTCACGGACAGCT
CACAGAGGAGCACTACACGTTCTTCTGGTCAGGTGGTGAGGTGCACCAAG
CCGGCGTCGCTTTCGCTGTACGCAAGGATATTCTCACAAGACTTGCCGCA
GCGCCGACTGTGATATCCAACCGCCTTTGCAGTGTTCGCATCAGGCTGGC
TGATAAAAGATTCTTGACCTTGGTGGCAGTATATGCCCCAACTATGACGT
ATGACGATGCCACGAGGGCGAGCTTCTACGCGGACCTCGGGCTTATACTC
AATGACGTACCAAAAGCGGACAAACTTATTGTCCTCGGTGACTTTAATGC
ACGCGTGGGGAACGACCGTCCCGGATGGAGCCGTGTGCTGGGGACGCAAG
CAAGAGGCAGGACAAACTCAAATGGTAGCTTGTTGCTGGAACTCTGCACA
GAACTGGACCTTGCAATCACAAATACCTTCTTTGCCATGCCTGACAAGTG
GTACTACTCCTGGATGCACCCCCGCTCTCGTACCTGGCACCTGCTGGATT
ACATCCTTGTGCGAAGAGATGACCTGAGGGACGTGTATTCTACAAGGGTG
ATGCGAGGTGCGACCTGTGGAACAGACCACTTCATGGTGAGGGCTGTATG
TAACCTGCGTATTGCACCTGTCCGCCGAAAACGCGCCAGACAACCCTTAC
GCAGACTTCATGTGAGTCTGCTTCCACAAAAGGCACAAGAGCTGGAAAAT
AAGGTGTCTGACTGCATCAACCAGCTGCAGGGTCCCGAAGTGGAGGAGCT
CAGTGTGAATGAGCGATGGGGCCAAATAAGCAAAGTTGTTTACGCTGCTG
CAAAAGAGGTCCTTGGGCACCCACGAAGGCGGCACGCTGACTGGTTTGAC
CAGAACGACACGGACATACAGATGCTGCTAGCTGAGGTGAGGGCTCGCCG
CCAGCAGTCTTTGGCCGGAGTGTGTACAAGACGGGCAACAGAGCAACTGA
GAGAAGCCCGCTCGAAGCTCCAACGTGTCACACGTCAAATGAAGAACGAC
TGGTGGGACCGCAAGGCGGACGAGCTACAGGGGTTTGCTGATGCACATAT
GACCAAAGCCTTCTACGACGGACTGAAGGAGGTCTACGGGTCCCGACACT
CAGGCTCAAACCCCGTACTCAGCGCAGATGGGGCGACCCTACACACAGCG
TCAGACGAAATCCTGGAGAGATGGAAGGAGCACTTCCAGCAGCTTCTCAA
CAGACCGTCTACTGTCGACCAAGCAGCCGTTGAGAGACTTGAGCAGCGCC
CTGTGCGCCAAGATCTGGACGGCCCACCTACGTCGGATGAGCTGCAGAAA
GCGCTGAAGTCCCTCAAGTCCGGAAAGGCTCCAGGTGTCGATGGTATACC
GGCTGAGGTATTAAAACACAGTGGCAAGGTGTTACACAACGAGCTCCTGT
GGTTGTATCGGAAATGTTGGGAAACCTGCGCCGTCCCTCAGGACTTCAAG
GACGCCATTATAGTGACTATTTACAAACGCAAGGGTGACCGTCGTGACTG
TGGCAACTTTCGTGGTATATCGCTGCTTAGTATTGCAGGCAAACTACTGG
CAAAGGTTGCCTTGGCAAGACTGCAGATAATCTCGGAGGCAATACTACCG
GAGAGCCAGTGTGGTTTCCGTCCCGGCCGCGGTACCACAGACATGATCTT
TGCGTTGAGACAACTTCAAGAAAAGGCTATTGAACAAAGGATGGGACTGT
ACATTGTCTTTATAGATTTCACCAAGGCCTTTGACTCTGTAGGAAGGGAT
GCTTTATGGCGCATCCTGGAGAAGTTTGGATGTCCCTCAAGGCTTCTTGG
AGTCATCAAGGCATTCCACACAGACATGCGTGCCATGGTGTCAGTCGACG
GCGAGGCCTCGGACTTCTTCCAGGTCCTTCATGGGGTCAAGCAGGGATGC
ATACTGGCCCCCACTCTGTTTGCGTTATTTCTCGCGGCAGTCATTGAAGA
AATGTCAGATGACGTGTTGGAAGGTATCTACATCAGAACTCGGTCTGACG
GTGGTCTTTTCAATCTCTCAAGACTAAAATCCCAACGCCACGTACTGGTG
AAGTGCATCCGTGAACTACTTTATGCCGATGACTCTGCTTTAGTGGCTCA
CACTCTCGGTCGCATTCAACGGCTATTGGAGGGTTTCGCGGGAGCAGCTA
GAGCTTACGGTTTGACCATAAACATCAGGAAAACAGAGGTTCTCCACCAG
CCAGTACCGGGGCAGCCACACACACCTCTGCTGGTGCTGCTGGACGGAAC
GCCCCTAGCTGAGGCAAAAACCTTTACTTACCTTGGCTCTACACTGTCAA
ACGACAATTCCATGGACTGCGAGATCGACGCACGGAGGAGAGCGGCCTCG
ACTGCATTCGGTCGCCAAAGGACCGCCTGTGGAATGTGA
Gene-mRNA-Prot
The following exon feature(s) are a part of this mRNA:
Feature NameUnique NameSpeciesType
Blg00194.0-exon-Sc0000026-1570713199:1707286..1709874Blg00194.0-exon-Sc0000026-1570713199:1707286..1709874Branchiostoma lanceolatumexon
The following polypeptide feature(s) derives from this mRNA:
Feature NameUnique NameSpeciesType
Blg00194.0Blg00194.0-proteinBranchiostoma lanceolatumpolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Sc0000026genomeSc0000026:1707286..1709874 -
Spatial Expression
in the tripal_feature_cv_term.tpl.php
Properties
Property NameValue
GeneIDBlg00194