Blg00192.0 (mRNA) - B. lanceolatum

Overview
Name
Unique NameBlg00192.0
TypemRNA
OrganismBranchiostoma lanceolatum (Amphioxus)



Sequence
The following sequences are available for this feature:

mRNA from alignment at Sc0000026:1564803..1566391-

Legend: CDSpolypeptideexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>Blg00192.0 ID=Blg00192.0|Name=Blg00192.0|organism=Branchiostoma lanceolatum|type=mRNA|length=1589bp|location=Sequence derived from alignment at Sc0000026:1564803..1566391- (Branchiostoma lanceolatum)
ATGTCCATTGTGAGCGGCAACCTATCGGACATTAGCTTCATGATCGATGG GGATCCTGTCAAAACAACTAAAGATGCACCGGAGAAGTTCCTAGGTGGCT ACATAACCTTCCTGGGCAAGACAAGAGAGACATACGACATTCTTGCCAAG ACAATAGAAACAACTATTGAAAATATAAACAAATCAACCATAAGAAATGA ATACAAACTGAGAGTATACATGGAGTACGCTTTCCCATCGTGGAGGTACA TGCTGATGGTACATGACCTAACAGACACCCAGTTACAAAAACTTGATGCC ATTCACACAAAGGCGATCAAGACATGGCTTAAAATGCAACCTGGTGCCAC AAACGCTATCCTGTACAACACAAGGGGTCTCAACTATAGAACTATCTCAG ACCTGTATCTAGAGGCCCACACCCTGGCCTACAGTAGATCAACCCTCAAA GGCGACGAGAAAGTAAAACATGCTGTACAAGCTAAGCTAGACCGTGAATC GCAATGGACCAGGAAGATGCAGAAGTGTGGTATTAAAACGTCCCACACTA TCCACCAACAGGCCACACATGCAGCAAAAGATTCAGAATGGTCTTCTGTG CGTAAACACATCAAACAACAGGTGACAGATATGCGTCATAACGTCTGGAG CGAGCACCAGAAAACCCTACTACAGCAAGGGCGCATGCTACAACTCCTGG AAGAAGAGAAATGTGACCTTACGTGGCGGTCGATCATATACAACCTACCA AAAGGTGTTCTCAGCTTCGCGGTACGTGCCTCGATCGACGCCCTGCCCAC ATTCTGTAACCTGATCACCTGGGGAAAACACAACAGTGACCGATGTAAAC TGTGTGGTAACCGAGAAACACTCCACCACGTCCTGAACCACTGCAATGTT TCTCTCCAGCAAGGGCGATATACCTTTCGACACAACGCCATATTAAAGTA CATAATGGACAGCATCCAGGAGGCTATCGATCTCCCACAGACCAACGCTA CAGTCTACGCAGACATCCAAGGACACACTATCAACGGAGGAACCGTGCCG GCGCACATATTACCTACAACTCAGAAACCAGACTTAGTCACCTACCTCCC AGAACAAAGGACAATCCACATACCTGAACTAACTGTGGCCTTTGAACAAA ACATTAACGCGAGCCATGAACGAAAGGTAAACAAATATTCAGCCCTAGCG ACAGAATTGAGAGCTGCGGGCACCACAACCACACTTACCTGCTTCGAGGT TGGATCAAGGGGACTCATCACACCAGAGAACAAAAACAGACTGCGTACAA TGTTCAAAGTAGTGCAGGCAAAAGTGCCTAAGAACCTTTTCAGAGACATT AGCCGCATAGCTATTCTATCGTCATATGCCATATGGAGTGCGCGACACGA GCCCCACTGGGAAGCAGACACTTTACTGTAGAAGCAACCGTAGTCCTGCC CTAAGTGCAATATCAATTTGTAACCTTTGTATATAAGTGAATATGTATTC GGATTTTAACTGTGAATTGTATTTGTAATTCGTCCGTCCCTGCACATTTG GTCACCACATCGTGATGACCATCGTGACCTGGGCTTTGT

Coding sequence (CDS) from alignment at Sc0000026:1564803..1566391-

>Blg00192.0 ID=Blg00192.0|Name=|organism=Branchiostoma lanceolatum|type=CDS|length=1431bp|location=Sequence derived from alignment at Sc0000026:1564803..1566391- (Branchiostoma lanceolatum)
ATGTCCATTGTGAGCGGCAACCTATCGGACATTAGCTTCATGATCGATGG
GGATCCTGTCAAAACAACTAAAGATGCACCGGAGAAGTTCCTAGGTGGCT
ACATAACCTTCCTGGGCAAGACAAGAGAGACATACGACATTCTTGCCAAG
ACAATAGAAACAACTATTGAAAATATAAACAAATCAACCATAAGAAATGA
ATACAAACTGAGAGTATACATGGAGTACGCTTTCCCATCGTGGAGGTACA
TGCTGATGGTACATGACCTAACAGACACCCAGTTACAAAAACTTGATGCC
ATTCACACAAAGGCGATCAAGACATGGCTTAAAATGCAACCTGGTGCCAC
AAACGCTATCCTGTACAACACAAGGGGTCTCAACTATAGAACTATCTCAG
ACCTGTATCTAGAGGCCCACACCCTGGCCTACAGTAGATCAACCCTCAAA
GGCGACGAGAAAGTAAAACATGCTGTACAAGCTAAGCTAGACCGTGAATC
GCAATGGACCAGGAAGATGCAGAAGTGTGGTATTAAAACGTCCCACACTA
TCCACCAACAGGCCACACATGCAGCAAAAGATTCAGAATGGTCTTCTGTG
CGTAAACACATCAAACAACAGGTGACAGATATGCGTCATAACGTCTGGAG
CGAGCACCAGAAAACCCTACTACAGCAAGGGCGCATGCTACAACTCCTGG
AAGAAGAGAAATGTGACCTTACGTGGCGGTCGATCATATACAACCTACCA
AAAGGTGTTCTCAGCTTCGCGGTACGTGCCTCGATCGACGCCCTGCCCAC
ATTCTGTAACCTGATCACCTGGGGAAAACACAACAGTGACCGATGTAAAC
TGTGTGGTAACCGAGAAACACTCCACCACGTCCTGAACCACTGCAATGTT
TCTCTCCAGCAAGGGCGATATACCTTTCGACACAACGCCATATTAAAGTA
CATAATGGACAGCATCCAGGAGGCTATCGATCTCCCACAGACCAACGCTA
CAGTCTACGCAGACATCCAAGGACACACTATCAACGGAGGAACCGTGCCG
GCGCACATATTACCTACAACTCAGAAACCAGACTTAGTCACCTACCTCCC
AGAACAAAGGACAATCCACATACCTGAACTAACTGTGGCCTTTGAACAAA
ACATTAACGCGAGCCATGAACGAAAGGTAAACAAATATTCAGCCCTAGCG
ACAGAATTGAGAGCTGCGGGCACCACAACCACACTTACCTGCTTCGAGGT
TGGATCAAGGGGACTCATCACACCAGAGAACAAAAACAGACTGCGTACAA
TGTTCAAAGTAGTGCAGGCAAAAGTGCCTAAGAACCTTTTCAGAGACATT
AGCCGCATAGCTATTCTATCGTCATATGCCATATGGAGTGCGCGACACGA
GCCCCACTGGGAAGCAGACACTTTACTGTAG
Gene-mRNA-Prot
The following exon feature(s) are a part of this mRNA:
Feature NameUnique NameSpeciesType
Blg00192.0-exon-Sc0000026-1570713199:1564803..1566391Blg00192.0-exon-Sc0000026-1570713199:1564803..1566391Branchiostoma lanceolatumexon
The following polypeptide feature(s) derives from this mRNA:
Feature NameUnique NameSpeciesType
Blg00192.0Blg00192.0-proteinBranchiostoma lanceolatumpolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Sc0000026genomeSc0000026:1564803..1566391 -
Spatial Expression
in the tripal_feature_cv_term.tpl.php
Properties
Property NameValue
GeneIDBlg00192