Blg00191.0 (mRNA) - B. lanceolatum

Overview
Name
Unique NameBlg00191.0
TypemRNA
OrganismBranchiostoma lanceolatum (Amphioxus)



Sequence
The following sequences are available for this feature:

mRNA from alignment at Sc0000026:1534366..1538547+

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>Blg00191.0 ID=Blg00191.0|Name=Blg00191.0|organism=Branchiostoma lanceolatum|type=mRNA|length=4182bp|location=Sequence derived from alignment at Sc0000026:1534366..1538547+ (Branchiostoma lanceolatum)
ATGGATGAGGACAACCAAACGTGGGAAGAATTTGTCGTCGCGTACTTTTC TGGTAAGTTCATTGACCTCCAGTTATTGTGCAGTCTTTCTTTTAATTCAC AAGGAGGCGCACTTGCATGTGTGGTGAACCCAACGTCGTCTACAGACTGC AGTACACGCTAGTTGGAAACTTGTAATAAAAGCGATGCTTTTACGTCAGT CTTGTTTATATATTAGTTGTCAGGAAAGGCACTTTACACAACTTTCCCTG GCGGTGGAGTGATGCCCTTCGACTAATGTGACTAAAAGTGAGCCCAAACA CACTGCAGATTTGGTTGCCGATGTGCCTATTAGTTGTTGCACGGCAAATA AGTGACGAAAAGGTTTCGATGGCCTAGGTTTGGGTCCACACTTTCCATAA TGTGCTGCGAAATGACATTGAGGACTAACACGAGTAGCGTATGAATTGGG TTTTTTTTTGGGTCAAATTTGAGGTTTTGGCTCGAGCCTTACGAGTATTT ATTCGCGTTGAAAGAAATGCGTCTCTTTGCCTGAAATTGGCGTTTGCAGT GTTTTGTTGGTGGCCTCAATTGCTATATATGCCTCGCACAGTGGATGATT AAAGAAAAAGACCTACAGTACTGGAATTTTCTCTACTATTGACACGATTC TATGCAAAGTTTTTCTATTTCTGACAAAATTTTCAATTCGACAAAATTGT AGAGGATGAAGAAACAAAGTTACACAATTTTTCTTGTAGCTGAATATCAC TTCACCCAATACACATTTATTTTACTTCTGAATATTTCCCTGGAAGAGAC GGTGCCTAGACTTAAGGTTGCGCAGCCTTCAAATGAAACATGAAAAAAAA CAGGGTAGTGCCCTGTACCTACTATTAACAATTTGGTTTGACGGATGTAA CACCCATTTTGTATGACAATGTTTTGTCCTCAATATATTCAGATACTGAT GCCGATGACGCGAGACAAATCATCCAGCGGTGCAGTACCAGCCCAATCGC TAGGTGTCTCCTTCAAAAGAAAGTCTTCTGGGGACCACTCTGTGAATTCC GACACATCTGCCAACCTCCTACCATCACGTCATTTGTGAAATACTGTATA GACTTTGGCCCGGAATACATGTTTTCCTTAGATATCGATAGAAAGGATTT CTACGAGTTTTTTGCCACAGCTCTGGCGTCACTTCCTGACATCGGTGACG TCATTTCCTATTGTGACCTTCAATATGGCGCCCAAATATCCGAGGAAGAA TGCAAAGGAGAATCCCCCGAACATCATATATTGAACATGGACGACGAACA CTTGACAGATTGTGAAATCAAAACGTTTTGTCAACTATTTCCGTACATGA AACATCTAAAGACATTGGTGCTGTCTTGTAGCGACTTCTCGCCAGAGGGC GCTTTACACTTGGCGCAAAACCTTGCGTTTCTCACAAGTTTGGAAGAACT AGATCTGACTGAAAATAAGATTGGAGACGACGGTGTGTCGAAAATCGTCC CGCACATTTGCCACATGTATAACTTCGAAGTAACAAATAGTGTTGTGAGT TTGAATCCAGGGCTTCAACTTTGTAGTCGGCAAGCGTATCGTCCAAGCTT CTCTCTCAAATTGAACTGCAACAGGTTGTCTGATGTCGGATTGACCGAGC TGACTGCACATGCGCGCTCCTTGCGACATGTGACCGAACTGGATCTGGGG AGAAACAGGATTGGTGATGATGGCGCAGCCGCTCTGGCAAACAGCTTCTA CAACCTCACTCGACTAAGGGTACTGATACTGTACATCAACAACATCCACA GTAACGGTGCCGTCGCGCTTTCAATGGGCCTGAGGTACGAAAAAGTTCTC ATCAACAGAAATTCTTTTACAAAATACAAACATGTGCGCTATAGATTATA ACCTCCATGAGAATGAGGGTACTGTTTTTGGCTTTTTTTGTTGTTGTTTG TCTTAATTGGTGTGTAGCCGTATTTTTTTTTTTTTAGAAAGCGGGTAATC TAGTAGATAAACACTTATAAGTATCAATTAAGCAAAATTATAGTTTGCTT ATCAGGTTGTTATTGCAAATATATTTTCTTCTTTCACAGATTCTTGCAGT ATCTACGGGTTCTCAGTCTTGGAGCCAACAACATTGGTGACAGGGGAGTG ATAGAGCTGGCTAGTCAGTTTGTACATATCTATAATCTAGAGGTTTTGAA GTTGGACCACACAGGGATGACCCACAAAGGTATCACAACATTAATTGAAT GCTTCGTATATTTATGTTTCAAACCTGTAGTTATCTGCTAATTCGCTCTA GTAATTTGGTCCCATGGTTCTTATAAAGAATTTTTTTTTTCGTACATGCC GATACAAAATAATTGAAACTATATATATGTATTTAAGACCACACACAACA AAAGCCTTCATCAAGCAATTACTTCACCCCTTCTGTAGCGTCAATTTTAT ATACAAATTTTGGACACGTGACTCAATGAGCAGTGTAGCAGATAGTTTGT GGCTCCCTCCGTCTATTTTCAGGGACTTTAGTAGGCCCCTGACGTATGTT GCTTCTTTTACGCTTATGGCTTATTTTTGCCCAAGGTGAATTTCTCCTCC ACTTTTATTGAAAATTTCGAAATCTATTCCAAAACCAGTGTATTTATTAT CTTTTATATCAGGTGTAATCGCCATTGCTGCGCAAGTTCACCACATACCT CGCTTAAAACAGCTCGACCTCGGGAAGAACAGGATCGGCGACCTCGGTGT CAGAGCTTTGACCGAGGTCTTCCTGAGCCTCAGACACCTTCAAGACCTCT TTCTATGGGACTGCGGCATCACCTCCTCTGGCGCAGAAGACATCACGAAC CGTTTGCCGCACCTTCTACAACTCCGAGAGCTCCAACTTGCAAACAACGA TATCACATTGGACAGTCTGCAACTGTTAGTGTCAGGCTTTCTCTCTACTC CCTGGCTTTCCAAAGTTGATCTGCGTGGGGTTCGAGCGTCAGAACTAGGC ACACAAGCAGAAGGGATGTTTTACAGCTTTGTAGAGAGTCTAGAGGGATC GGTTGGCTTGTACAGTGGGTATCGAAGTCAGGAGGACGAGTTGAGGTGGG GAACTGAAGGTGAGGACGCAAACTACAGGAGATATCGTTTAGGGAGTGGA AACAACTCGAAGATTGTTACTGATAGACTGAGTATTTTGTTCAGCGTACG ACTGGATGATCAGTTAGTTAGTTAGTTAGTTTGCTTGTTTCCTCCCAAGA GATTGCAATATTGGTTCAAGTGCGCAGGTGTGTGTGTGTGTGTGTGTGTG NGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG TGTGTGTGTGTGTGTGTTTGTGTGTGGAAACTGTAAGAAAAAACTCGATG AATATTTCGGAGATGCAAATATGTATCATATTAAGATAGAAAAGTGACGT GTTTTCTACGTATTGCACATGTGCACAAACTACTAACAGGTGTACTCAGA ATAAAGAATCTGGTGCAAATTGTTGGTTTTGTGTGGCTCCTTTTTTCTTA GCCATTCAACCTACAAGTTACACAAATACCTTCAACATATTTTATGAATT TTATATGGCATTTTTCGACTCTACCTTTCCCTTGTTACGATATTCAGCCA TACAGCGGTCCTCTTTTTACACTATATAGCAATACATTATGGCATGCGAG AAGTTGTTATTGCGTTCTTCGAATTCTCAGTGGTGATACTAGAACTTAGT TCGGAAAATCGTGCCGAAAAATGATCCCCTTAGTTCTCCGAGCCTACAAA AGCTCCAACCGCGATTTTCAGTGAGTTCTCACATCACAACGACATCGTAT TTTTGCATCATGGATGTCGCTTTACATTGTGATAGTGTTGTTTTAACTAT TCATGTATAGAAATGACTTAGTCATTAAATTGACTTTCACAATCCGATTT TCGTGCCCTTATATTGCTTGGGTTGCCTTTAAACTGCGCAAAACGGCATG GATGGTAAACTTCATTATCAGAGGAAATATTAGTATAAATGCATACTCGG AAGGAGTGAAACAGGCGGGGAGAAAAGTTACAGACAATACATTGTTCCCA TATAACCTGGTGTCTCTTACAATTGGTTACACATTTGGACCCGTCCTCTC GTGTGTTTTTTTTTAGGTTGGAGAAGTGCTAG

Coding sequence (CDS) from alignment at Sc0000026:1534366..1538547+

>Blg00191.0 ID=Blg00191.0|Name=|organism=Branchiostoma lanceolatum|type=CDS|length=741bp|location=Sequence derived from alignment at Sc0000026:1534366..1538547+ (Branchiostoma lanceolatum)
ATGGATGAGGACAACCAAACGTGGGAAGAATTTGTCGTCGCGTACTTTTC
TGATACTGATGCCGATGACGCGAGACAAATCATCCAGCGGTGCAGTACCA
GCCCAATCGCTAGGTTGTCTGATGTCGGATTGACCGAGCTGACTGCACAT
GCGCGCTCCTTGCGACATGTGACCGAACTGGATCTGGGGAGAAACAGGAT
TGGTGATGATGGCGCAGCCGCTCTGGCAAACAGCTTCTACAACCTCACTC
GACTAAGGGTACTGATACTGTACATCAACAACATCCACAGTAACGGTGCC
GTCGCGCTTTCAATGGGCCTGAGATTCTTGCAGTATCTACGGGTTCTCAG
TCTTGGAGCCAACAACATTGGTGACAGGGGAGTGATAGAGCTGGCTAGTC
AGTTTGTACATATCTATAATCTAGAGGTTTTGAAGTTGGACCACACAGGG
ATGACCCACAAAGGTGTAATCGCCATTGCTGCGCAAGTTCACCACATACC
TCGCTTAAAACAGCTCGACCTCGGGAAGAACAGGATCGGCGACCTCGGTG
TCAGAGCTTTGACCGAGGTCTTCCTGAGCCTCAGACACCTTCAAGACCTC
TTTCTATGGGACTGCGGCATCACCTCCTCTGGCGCAGAAGACATCACGAA
CCGTTTGCCGCACCTTCTACAACTCCGAGAGCTCCAACTTGCAAACAACG
ATATCACATTGGACAGTCTGCAACTGTTGGAGAAGTGCTAG
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Feature NameUnique NameSpeciesType
Blg00191.0Blg00191.0-proteinBranchiostoma lanceolatumpolypeptide
The following exon feature(s) are a part of this mRNA:
Feature NameUnique NameSpeciesType
Blg00191.0-exon-Sc0000026-1570713199:1534366..1534417Blg00191.0-exon-Sc0000026-1570713199:1534366..1534417Branchiostoma lanceolatumexon
Blg00191.0-exon-Sc0000026-1570713199:1535308..1535368Blg00191.0-exon-Sc0000026-1570713199:1535308..1535368Branchiostoma lanceolatumexon
Blg00191.0-exon-Sc0000026-1570713199:1535990..1536199Blg00191.0-exon-Sc0000026-1570713199:1535990..1536199Branchiostoma lanceolatumexon
Blg00191.0-exon-Sc0000026-1570713199:1536455..1536594Blg00191.0-exon-Sc0000026-1570713199:1536455..1536594Branchiostoma lanceolatumexon
Blg00191.0-exon-Sc0000026-1570713199:1537028..1537289Blg00191.0-exon-Sc0000026-1570713199:1537028..1537289Branchiostoma lanceolatumexon
Blg00191.0-exon-Sc0000026-1570713199:1538532..1538547Blg00191.0-exon-Sc0000026-1570713199:1538532..1538547Branchiostoma lanceolatumexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Sc0000026genomeSc0000026:1534366..1538547 +
Spatial Expression
in the tripal_feature_cv_term.tpl.php
Properties
Property NameValue
GeneIDBlg00191