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Sequence
The following sequences are available for this feature:
mRNA from alignment at Sc0000026:2352179..2358760+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >Blg00188.1 ID=Blg00188.1|Name=Blg00188.1|organism=Branchiostoma lanceolatum|type=mRNA|length=6582bp|location=Sequence derived from alignment at Sc0000026:2352179..2358760+ (Branchiostoma lanceolatum) TGTGTGTGTGTGTGTGTGTGTGTGTGTGTATGTGTGTGTCGGATACCAGC
ATAACTTGAAAACTATGGATGGATCATTATTATATTTGGAAGGTCGGGAA
AACGAAGACCAATTTTCTTTATTAGGCCCCATACTGACCTTCTAAGATAC
TGCCGTTCCGGTTTCAATTTATCCTGTTATGGACGTGCTATGGTCGTATA
TTATGATTGGTACTAGTGGATAGTTCTTGAGGCAGAGAGTAAGTGATGTT
TGCTTGGGCTCCCTCGCGGTTTCTTTTTTAACTGCAGGGGCCAAATTTGT
AAGAACTTTGAAAGAAAATAACCGAAGAAGGGCTTGACGGATCATGATAA
TTTTTTGTATGTTTTGGTACTTTGCTGTAACGTTAAAATTACAATTATGA
ATTTTTGACTTAACAATGAGGAACAGCCTACGGCAGATCTTCAAAACACG
GTGAAAATGACTAATCAGTTGTTATTTACCATAGATAAGCCTTTTATAGT
TTAATATAAAGCTTTACAATGTGATTTTTTTCAATCGTTGTTTTTGATCC
ACATTTTACATGTTAAATGTAACAGTAGAGGAGAAGCTTGTTATTCTTGA
CGTGGACCCCGGAATTGATGACGCCATCGCCATGTTGATGGTGCTATCCC
AGCCTGCCGTGCGCGTGCTGGCGGTCACGTGTGTGAAAGGGAACACACGT
GACGTTCAACAGGGATGTAGGAACGCGCTGAGGGTGTTACAGGTCGCCGG
ACGCATGGATGTGAGTTCTGACTTTGTTATGCATTACAGATCCACTCATC
TAGAGGTATACACCTTTTTCACACGGTGGACATGATAGAATGAATACGAG
GCCAATGGGGCAAAGAAGCAAAGATAATGTACCGATTTAGTTTTCCTCCT
AAATCACATATCCAAGTATCAACATCATAACTAATGTAGTAATGCACACA
AAAAAATCAGTAATTTAGAGCTTTTTTGTGCGATCCCATACTTCCCACCC
TCTTCCGTCAAAACGTAGAAATGCAAAATAAAAACATTCCTCATTGGTCA
ATTCTCTAATTATTGGCTAACCTGCTAATTGTGATTGACAGTTAGGATTT
GTCTAATGTTTGCCACAGGGACCTCGTTTTCGTTTTAGCATGTTTATGGA
CTTGTTTAATATTGTATGGTCAAAACGCATAATAAACACAATTTAATTTC
TCAATACCAATATGCCTTGGTGTCCCAGATCCCTGTGTACGTAGGGGCAT
CGCTCCAACTCATGGGCCATGACGTTTTTGACCACGCTTACTTTAACGGA
GTCGACAGCTTGGGAGATGTACCAGACGTCAACCCACCTGACTACAGCCT
TATCAACCAAACAGGTGCCCAGCTTGTAACTTTAGCTAAGGGCTTTCTGT
CCTAAGCCCCCCTCTCACTGGACCCGCGGCACACTGGCGGCGTCGTTGCG
TCCTAAACTGGATTTGTGTTACCCTTTATTTTATAATGGGAATATCATTC
AAAACGTACAAGTATGATCAAAAAGACAACAAAACACACAAAGCTTGAAA
ATATTTGTTTTTTTGTCGAGGAAATTTGTTGAGAGCTCTGTCAATTCGAT
CTGCCGCAGCGACGTCGCCAGCGTGCCGCTGATCCAGTGAGAGGGAGGCT
TTAGAGTACAGAATATTGTACGCAGCTAACGTCTTAAAAATCTCAATGCT
AAAACCCGAACCAAACTCAGTAATTAGATTATTATCTTCTGACTGAAATA
TTCAACCTGTGGATTATTCAACCTGTGGATTATATGAAGAGGAAGAGTTC
CAAAGGAGAAAAAAAAACTCGATAATGCAGTAAGACAGCTTTGAATAGAT
TCATAGTACCATTCTTTACTCGCTTATCCATCCTACATGTACTATCAGAA
ATGTGTATGATGGAACTCAAGGTGTTAACCACGTGCAACAAGTTTGATAT
GAGGGACGCCGTTCCAAACTGAAGCTCCATTTTGTGATCTGCTCTCGCGA
GAGCAAATCCTGGCGTGAACTCGCGTGATTTGGGGCCCGAGCGGGAAATC
CGATTCTGGGACCTCTTGTTACAATGATATCCCCAACAGCAAGCGCGGAG
AAGAGTATGAGTGATTCTGTATGTTTGGCTAAAAGCGTAACTATTATCAT
ACTAGCTTTAGTAGAAAATTAGCTTTTTTTTAAATTTTGCCTAGTTTTCA
ACTGACTTATATTTTCGCCATTAGAACACGCTGTGTTGACGTTGATACGG
CTGTCCAAGGCCTACCCGAACCAGATCACACTCATCGCCCTCGGTCCGCT
CACTAACCTTGCCCTAGCCAGGAGGATGGACCCGGACACTTCCTCACGCT
TCAAGGAGATCATCATCATGGGAGGCAACATCAGAGGTCAGGGGATGAAC
TGAAACAATTTTCTAGACGGTTCTTGGTGGCAAATGTGCTAGATGTTGGC
ACATCGGCAACCAAATCCGTCAAATCCGTAATGTGTTTCTGGCACATACT
TTAGACAGATTAGACGAAGAGGCTCGTTGGGCGTCACTCCACTACCAGGG
GAAGTCGTGTAAAGTGCCTTTCATACACACACACACACACACACATACGC
GCACACACACACACACATACGCGCACACACATACATACACACACACACAC
ACACACACACACACACACACACACACACACATAAATGAATTTGGTGCGCC
AACGTGCCAAGATGTGCATATTTTCCGCTAAGAACCGATTTCTTTGATGA
CAGAGGCTAGGAAAAGAGGACACTGGCTCGTATCATTGTCCTGACTAACA
TGCTGGCTGGGTTAAACCTGGATCCTACGTATACCTGTAAAGTTGCATCT
GCAAAAGACATAATACGTTAAAGTTACGTATACGTGGCAAAGAGAACAAT
TTGTCTTTCGCTACAAAAGGAAATCAAATCTATTTGATATATCCAGGTTC
AATTATCCAACATGGCGGACTGCACTTACGTCATAGACAAGTCATAGTTA
CGTTATAGTAATAGTTACACCTATTGGTCTTATCGACGGTTTTATGATGT
ATCTCATAACCTTAAAGCTGCACTATGTAACATTTTGGCGCAAAAATTGA
AAATATTCTTCTGAACAAATTCTTATACAAATACATGGACAACCACTTTT
CAGCATATTTCCATCATTAATTCGTCTATTTCTGGCATGTATGATGCTTT
TAACTGTACAAAAACAAGCTGCAAAAGTCTGTGACGCCACCTCAACCTAA
AGCCTAATGTTTGTAAACAACAACGTCCTGCACACTGGCAGGACCCCTTG
GGTAGGCTAACTGCTTAGCGACACTTCAGTGGATCTAGATAACAGCTGAT
GTTATGAAGATCATCTTCTTCAAAAACACTCATATCTTTTTGAATGAGGA
TAAAACATGTTAGCCAAGTTTGTAGGGAACTGATAAAGTGGATTTCCCCC
GTTCAAAACTGCTAGAACTCTGATAAGGACGTTTGGCAGATGCAGTATCA
AGGTATCAAGGCAACTGTAATCAGGCACCCTACTGGGCAGTTGGGGTGAT
AAGCCTGTCTGGCCACACTGCCCCAACTGCCAACTGGCTTTGGAAGCTCA
GCTTTTAAACTGGTTTATATGGTGCAATGATGTTGAAACATTCCTTCCTG
AATACTGGTATGTCATACAATGTTTATTCAACATACTATGCAAAGAAATG
GTAGAAAAATTGACTTTCTGTATTAACAAAAATCTTATATAGTGCAGCTT
TAACTCGTCCACAGGAGTCGGTAACATGGACGTAGCTGCCGAGTTTAACT
TCTGGATGGACCCGGAGGCGGCCCAAGTAGTTTTGAGGGAGTACAAGTGT
CCCATGAAGGTTGTGCCGTGGGAGGTCTGTCGAGAACACGGACTGGAATG
GGTACGTCAACGAGTTTTCAGCTTCTCTATACTATATTCATTAACGCAAA
GGGTATACATTTCTAGGTAAAGGTTTTTTTTGGCGAAGCCTTAGGGGCGA
GCCTAATGGTATATTTATTGTGTGCAGTTTGCAATAATTCTAGCAATTGT
ACAGGAATGTGAAAGTCCACGGGACCATAACTCAAGGATGCCTGCATGGA
TGGATTGTTTTCATATTCGGTAGGTGGGTAGTAATTTGTGAGACCTCGAT
ATGATTGGAATTTAGGCCTCCTAGCAACTTTCTATGCTACTGCAGGGAAA
CTTTGGTTTCTGAAATCTCGTGTTCTGGACATGCTATGGTCAGTTTTTTT
TGTGTGGTGGATAGCTCTTTATTAGGAAAATAGGTCCTGTAGATCTCGGC
CCCCCAGTGGCATTATTTTAGCATTCCACGACCTGAATCAGACAGCTGTC
ACTATGGTTACTGGTCATGTAGCAGACACCCTGTGGTACTCGAGTAGAAT
GTAGAAAGCTTTAGTGGCAGGACAGAGCTGGAGGGCTGGTCACCATAAAT
GTGAATGTGCTTGAGTAAGAATAGACAGAACAGTAGTTTGTTAGGCTGAC
CGGATTGTATAAAGATAAACATAATGTATTTGCCTGCAACTGTTACATTT
CGAGTATATTTATTAATTTTTATCTATTTATTTGTTTATCTATTTATTCA
TTGAGAGTTATTACATTTATTTTCCATAAAGGGTTTCATCACAAGCTGGT
TAACTGCAGACACACCTAAGGCTCGCTTCATCCGGGACATTTCATACAAC
CTGACGCAACAACAACAACAAGACGGCGCGCTAACGTACACGCCAAGTGA
CACATTGGCAACCGCCGTTGCTATGGACAACGCCCTGGCACAGACCGTAT
CTAATGTGTACGCCACCGTGGAAACAAAGGGCGAGTTTACAAGAGCACAA
ATGGTTGTAGATTGGGGAAGACTAAGTCGGAAAAGTCCTAATATTGACGT
CATGCAAAACTTTGATATGGCACGGTATAAAGAGCTTTTGACCGAAGCAG
TACATTAATGTATTGATATACATGTAATATCATGGAAGCTCATCTATGTT
GGTAGTAATCCTAATACAGTAGAATCCGCTTATTTGTCAGAGTATTTTAT
GCAATAATAAGGAGTAGTCCATTAACCCTAGGGGACAAAATGAGAGGCAC
TGAGGGGGGAGGGGGTTGTTGTGGTTACTAGGATGGCACTTCAAGGAAAC
ACACACACTTTGAGTCAAATTCACTCCCTCCCAGGTTATACAAAATTCAA
CATATTGACTTCATAAGCATATCATCAGTTTTAATATATACACATGTTGA
GTGCAAAGGATGGCAAATTAAGCAAAAAATTGGCAATTCTATTCTTCTGT
ATCCTATCACAGCAAATGACAATGGAGTTGCTAGAGCTTTTTCAAAACAT
AAAGGACAACAACAGTTCCTATGGAGTTGTTTTACCATAGAAACTATCCA
TACTCGATTTACATTTGAATAACATTTGCATACAATCTATAAGAGTTAGT
GACTTTGACATGTTCAACCAGTTTTTCCTGTTGCCATTGGCATTATTTTA
TGCAAATATGAGGAGTATGCAAAAATGGATGGGAAATGGTTTGGGTTTTC
AGAATGTTATGCATATCCCCGAAAAATGCTATTAACAGTAATGCAAATAG
CTGGATTCTACTGTACAATGTTAAACTTTCTTCCAACACTAAAGGTACTC
GTGGATCAAGTTTCTGGTGACCACTGTAGTCTTCTTCATGATCAATAAGG
CGACTACTTCATGAGACATATACATCAGGGCTCTCCAGTCAGCACTTACC
AGAGACAGTGGACGTTATAAACTTCCTGGCACGTTTGACCAACTGCCTAC
GTCACGTTTTTGTAAAGATACGTGTCAATAAAGTCACGTGTCCGTAGCTC
TCGCGAGTTTACGTTCGGCAGTGATTGGGCATAATTGATCCTGAAGAAGG
CGACAGTGGTCGTTGAAAATTTGATCCGTGAATACCTTAGTGTTGGAAGA
AAGTTTAGCACTGTAGTATTGATATAATGCACAGTTTTTCTTCCACCAGT
ACCCTTTTTTATCATGACCAGACGGGTGGCGGTATAGATTTCCCCTGCTT
TAAGTAATACATTTGTCATTGACGGGCGATAAATGTAACATAACGGTAGA
TATAAGCTTTTCATTACAATAATATCAACAATATCGATTATATGATGATA
ACTTACATCTTTATAAACTTAAGTTGATTCTTTTAAGTTGTTAGCAAAAT
ACGAATCAGTTATACTCGACCTTGTGGTGTTTATGACACCAAAATACAAC
GTTTTCTTATCATCTGCAATACATAAACGTTTAAACAAATACACACCCTT
CGGATGTTATTTAACATTGAACCATCAGAAACCATACTTCCAGCTCTTGA
TTAAGTTCTGATCTTCTCACCTGGTAACTACATTAATCAGTGACTTTAAG
TTCCAAACAGGCTGCCATGTTCATTGTGACGTCATGAGGGGTGAAGTCAC
TGATTAATGCAATAACATCCGAAGTGTGTATGCTTTTTGCAAATGCCTAT
GTAATTAAACAATATTATTATGGTTTATGTAATTTCAGGAAATTCGTAAC
TTTGATGTCATTGGTGTCTTATACACTTGAAG Coding sequence (CDS) from alignment at Sc0000026:2352179..2358760+ >Blg00188.1 ID=Blg00188.1|Name=Blg00188.1|organism=Branchiostoma lanceolatum|type=CDS|length=963bp|location=Sequence derived from alignment at Sc0000026:2352179..2358760+ (Branchiostoma lanceolatum) ATGTTAAATGTAACAGTAGAGGAGAAGCTTGTTATTCTTGACGTGGACCC CGGAATTGATGACGCCATCGCCATGTTGATGGTGCTATCCCAGCCTGCCG TGCGCGTGCTGGCGGTCACGTGTGTGAAAGGGAACACACGTGACGTTCAA CAGGGATGTAGGAACGCGCTGAGGGTGTTACAGGTCGCCGGACGCATGGA TATCCCTGTGTACGTAGGGGCATCGCTCCAACTCATGGGCCATGACGTTT TTGACCACGCTTACTTTAACGGAGTCGACAGCTTGGGAGATGTACCAGAC GTCAACCCACCTGACTACAGCCTTATCAACCAAACAGAACACGCTGTGTT GACGTTGATACGGCTGTCCAAGGCCTACCCGAACCAGATCACACTCATCG CCCTCGGTCCGCTCACTAACCTTGCCCTAGCCAGGAGGATGGACCCGGAC ACTTCCTCACGCTTCAAGGAGATCATCATCATGGGAGGCAACATCAGAGG AGTCGGTAACATGGACGTAGCTGCCGAGTTTAACTTCTGGATGGACCCGG AGGCGGCCCAAGTAGTTTTGAGGGAGTACAAGTGTCCCATGAAGGTTGTG CCGTGGGAGGTCTGTCGAGAACACGGACTGGAATGGGGTTTCATCACAAG CTGGTTAACTGCAGACACACCTAAGGCTCGCTTCATCCGGGACATTTCAT ACAACCTGACGCAACAACAACAACAAGACGGCGCGCTAACGTACACGCCA AGTGACACATTGGCAACCGCCGTTGCTATGGACAACGCCCTGGCACAGAC CGTATCTAATGTGTACGCCACCGTGGAAACAAAGGGCGAGTTTACAAGAG CACAAATGGTTGTAGATTGGGGAAGACTAAGTCGGAAAAGTCCTAATATT GACGTCATGCAAAACTTTGATATGGCACGGTATAAAGAGCTTTTGACCGA AGCAGTACATTAA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
Feature Name | Unique Name | Species | Type |
Blg00188.1-exon-Sc0000026-1570713199:2352179..2352938 | Blg00188.1-exon-Sc0000026-1570713199:2352179..2352938 | Branchiostoma lanceolatum | exon |
Blg00188.1-exon-Sc0000026-1570713199:2353407..2353542 | Blg00188.1-exon-Sc0000026-1570713199:2353407..2353542 | Branchiostoma lanceolatum | exon |
Blg00188.1-exon-Sc0000026-1570713199:2354403..2354564 | Blg00188.1-exon-Sc0000026-1570713199:2354403..2354564 | Branchiostoma lanceolatum | exon |
Blg00188.1-exon-Sc0000026-1570713199:2355943..2356079 | Blg00188.1-exon-Sc0000026-1570713199:2355943..2356079 | Branchiostoma lanceolatum | exon |
Blg00188.1-exon-Sc0000026-1570713199:2356810..2358760 | Blg00188.1-exon-Sc0000026-1570713199:2356810..2358760 | Branchiostoma lanceolatum | exon |
Position
The following features are aligned
Aligned Feature | Feature Type | Alignment Location |
Sc0000026 | genome | Sc0000026:2352179..2358760 + |
Properties
Property Name | Value |
GeneID | Blg00188 |
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